Drep004520.1
Basic Information
- Insect
- Drosophila repleta
- Gene Symbol
- grn
- Assembly
- GCA_018903745.1
- Location
- JAEIGN010000233.1:19450457-19472171[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-20 2.1e-16 59.0 4.7 1 35 111 144 111 145 0.98 2 2 2.4e-19 7.4e-16 57.2 6.3 1 35 171 204 171 205 0.97
Sequence Information
- Coding Sequence
- ATGTTCCAAAGTTCCTCCGTGGCGGCGGCCGCTGTGCGGCATAGCATGGCAGCGGCGCACCACCATCACCACCACAGTCACAGCCACCACAGTCAGGCGGGCTCCGGAGCGGGCCAGCATGGCAGTGGGGCTGGTGGTGGTGCTGGTGGTGTGGGTGGTGCCCTTGGCATGGGCAGCGGCATGGGCAGTGCCATGAGCAGCGGCGGTCACAGCAGCTCCAGCGGCGGCGGCGGCGGCGGCGGTGGCGGAGCCAACTCTAGCAGCCTGAGCCTCGGACTCGATGTGAAGCCCGTGCGCACGAAGCCCCGGACAAGTGCGGAGGGCCGCGAGTGCGTAAACTGTGGTGCCACCTCCACGCCGCTGTGGCGACGCGACGGCACCGGACACTATCTGTGCAATGCCTGTGGCCTCTACTACAAGATGAACGGACAGAATCGGCCGCTGATCAAGCCAAAGCGAAGACTGACGCTGCAGTCGCTGCAGAGCGCGGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCCAGCGGCGAGCCGGTCTGCAATGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCACTTACCATGAAGAAGGAGGGCATTCAGACGCGTAATCGCAAGCTCAGCTCCAAGTCGAAGAAGAAGAAGGGCCTGGGCGGCGGCTGTCTGCCGATGGGCGGACACCTGGGCATGGGCGACTTCAAGCCGCTGGATCCGTCCAAGGGCTTCGGCGGCGGCTTCTCAGCCTCCATGGCGCAACATGGACACCTTTCCAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGCGCACTGGGCGCCTCCGGTGGCCTGCAGGGTGGCTTCTCTACGGCCGGTTCGCTGGGCGGCGGCGTAGTGCCCCACTCGCAGCCCTATCACTTGGGTCTCAGCTCAATGGGCACTTGGCGCACTGACTACACGTGA
- Protein Sequence
- MFQSSSVAAAAVRHSMAAAHHHHHHSHSHHSQAGSGAGQHGSGAGGGAGGVGGALGMGSGMGSAMSSGGHSSSSGGGGGGGGGANSSSLSLGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -