Drep005292.1
Basic Information
- Insect
- Drosophila repleta
- Gene Symbol
- -
- Assembly
- GCA_018903745.1
- Location
- JAEIGN010000497.1:6838676-6842955[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-09 3.9e-06 26.3 0.0 17 41 105 130 100 133 0.86 2 4 1.6e-14 3e-11 42.6 0.1 2 39 144 181 143 184 0.94 3 4 3.6e-18 6.9e-15 54.3 0.0 1 45 198 243 198 243 0.98 4 4 3.7e-20 7.1e-17 60.6 0.0 1 43 250 293 250 294 0.97
Sequence Information
- Coding Sequence
- ATGGAGATTGATCCCAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGTGTTTGCGGCCCCGGCGCCGGTGGTGTTGGTGGTGGTGGTGGTGGTGGCGGCATTGGTGGTGGTGGTGTTAATGCTGGCGAGAAAGATGCATTAAAGACCCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACCTTATGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCGTGGAACGAGGACGCCCTGCAGAATGCCTTGGAGGCCCTACGCTCCGGCCAAATATCGGCGAATAAAGCATCCAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCGGAGGACCTGGAGCGTGCATTGGAGGCGATACGTGCTGGCAACACGTCCGTACAGAAAGCAAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGTGGCAAATACGACGTGGTGGCCAACACCAGTGGCATCTCGCTTAACAACACCTCCGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCATCAGTTCCCGTACAGTCCGTCGCCGCACGCGCAGACGCCGCAGCACCACGGAACGCCGCAGCATCATGGAACGCCGCTGCACCACACGGCAGCAACACCTTTTGCCAGCATCGCGGGCCTGGGCAGCGGGGCGACTGTGACGCCAGCGCCAACAGCGGGCACCAGCAGCAAGCGCAAGAAAGCGACCAAGCAAAAGCGTTGA
- Protein Sequence
- MEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGIGGGGVNAGEKDALKTQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQHQFPYSPSPHAQTPQHHGTPQHHGTPLHHTAATPFASIAGLGSGATVTPAPTAGTSSKRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -