Basic Information

Gene Symbol
Arid4b
Assembly
GCA_018903745.1
Location
JAEIGN010000750.1:3432213-3443118[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-29 1.4e-25 89.2 0.1 1 88 300 385 300 386 0.96

Sequence Information

Coding Sequence
ATGCAGCAAGTGGACGATCCACCATCGCTGCCCGTGGGCACCGAGGTGAGCGCCAAGTACAAAGGAGCCTTCTGCGAGGCAAAAGTCAGTAAAGTCGTGCGCAACATCAAAGTGAAGGTTGCCTACAAGCAGGGCCTGGGCTCGGGCATCGTGTCGGACGATGCCATCAAGGCCACGCCCGGCCAGCTGCGCGTCGGCGCTGTCGTTGAAGTCCGGCATCCAGATCGCAAGGAGAACGTGGAGGCGACCATAACAAAGATCCAGGATTGCTCGCAATATACGGTCGTCTTCGACGACGGCGATATCACCACGCTGCGTCGCACTGCGCTCTGCCTGAAGAGCGGCAGGCATTTCAATGAGAGCGAGACGCTGGATCAGCTGCCACTCACACACCCCGAGCATTTCGGCAATCCGGTGGTGGGCGGTCGTCGGGGACGACGGCGCGGCCAGCTGAACGACGGCAGCTCGGACGATGATGACGAGAGCGATGCCAAGGAGGTGGTCAACGAGAAGGAGGAGCACATTGGCAAGGTGGTCTGCGTGGAGACCGAGTCCAAGAAGAAAGACAAAGAGAAATGGTTTCCCGCCCTCGTCGTGGCGCCCACAGCGCAGGTCAGCAAGCAGGCCACAGTGCGCATCCGTGTCAAGGACGAGTATCTGGTGCGCTCGTTCAAGGACGGACGCTACTACACGGTGCCCAAGAAGGAGGCGAACGAGTTCACACGCGAGATGGCCAGCAAGCAGGACGTGCCCGCCGTGAAGGCAGCCTTCGAGTTCCTCGACAGCAGCAAACTGCCTGCCCACTGGGATCGCGACTCGCTCTTCGGCCTCTCCAATCTGACGAGCGATGATGAGGGCGAAATCGACTCGGATTCATCCGACGACGAGCCGCACGAGGAGAAGGATCGCTTCGTGGCCCAGCTATACAAGTACATGGACGATCGGGGCACTCCGCTAAACAAGGTGCCCTCGATACAGAGTCGCGACGTGGATCTGTATCGCCTGTTCCGGGCGGTGCAGAAACGCGGCGGCTACAATCGCGTCACCACCAAGAACCAATGGAAAGTGATTGCCATGCGGCTGGGCTTCACGCCGTGCACCCTGAGCGTTATGAATCTGGTGAAGCAGGCCTACAAGAAATTCCTGCAGCCCTACGGCGACTTCCATCGCAAGCTCGGCTGCTCCATGCTGATGACGTCGCGCAACTCGAATCGCAGCAAGGGCCGGAGCTTGGTGCGTGCCAATTCCGTGGCATCGCCCAAACCGCCGGACACCAGCAAAATGGAAACCATAAGCAAGCTGGCGGTGGCCAATCAGACCACGATTGCCGCCAGCAGCAGCAGCAGTGGAGGCGCCACTGCCACCGCAACGACGGCCAGTGGCAGCGGAGCAACTGCGACGCCCGTGCGCGCCGCCTCGACGGCCTCGCAGTCCGCGACGGAGGAGTCGGAGAACACCAGCGAGTCGTCGGTCGTCGTGGAGCCGGTCAAGAAACAGCGCAAAGCATCCGCCGGCAAGGTCAAGAGTCTGGTGGAGAAATACGAGGAGAAATCATCCTCCATCTCGAGCCTTGGCCCCGTCGCCACAGCCGCGCTCAACACGGCGAATCTGGGTGGAGCCGCCTCATCCACCGCCGCAGCAGCCACCTCATCCGCATCATCATCATCCTCAGCCAGCGCATCAGCTGCTGCGTCAGCGGCCGCCACAGCTGCTGTCACCGTGAAAACCGAGGCTGAAGCGGACGTGCCCTTGGCCAAGATCAAGGCTGCGTCAGTGTCGACGCGCAACAGCATGGAGAAGGAGCCCAGTGCAGCTGGCAGCAACGCCTCCAGCAAGGCAGCATCGGAGACCCAGCGCAGTCGCGATGCCTCGCCCACAGCAGCAAGCGGCACAGGCGCCGCAACGAAAAAGGAGAAACACCAACAGCGCAAACAGGTGGAGAAGAGCGAGGAGAAACGCGGCAAGCGCAAAAAGGACGAGATAACTGTTGAGAAAATTGACACTGGGGATTTTGTCGTTGGCATCGGCGACAAATTGAAGGTCAACTACCACGAGAAGAAGTCGCCCAGCTCCCATGGCAGCACCTACGAGGCGAAGGTCATCGAGATCAGCGTGCAGCGCAACGTGCCCATGTACCTGGTCCACTACACCGGCTGGAACAATCGCTACGACGAGTGGGTGCCGCGCGAGCGCATCGCCGAGAATCTAACCAAGGGCTCCAAGCAGAAAACCCGCACCATCAGCACCAGCAGCGCCAACAGCGGCGGAGCACCCGCCCAGGCGGGCGGCGCAGCGGGCAGCAGCAGCAGCAACAACAACAACAACAGTGGGAGCAGCAGCAACAGCGGACCACCCAAGGATGGCGCCGGCAAAGCGGAACAGCAGCCACCACCTGGACCGGGCACCGGCTCCGGCACGAGTGCTACTCTGCTGCACGGGCTGACCAAGACGCCCACATCGTCGGCGGCTCTGAGCACACAGTCGGCTAGCAAGCGGGGACGCGGGCGCAGCGATTCGATGCCGCCGCGCTCCACGACGCCATCGTCGGTGGCCTCCAATTCGAGCCGCACCAAGTCGCCAGCGGCGTCGCAGTCGCTGGCGCAGCTGAAGCACAAGCGGCCCACGCGAACGCTGCCCATGAGCAGCAGCAGCAGCAACCAAGCGCGTCGCATCTCCGCCTCGGCCTCCATCTCGGCCAACGTTTCGGATGCCTCCATGGGCACTGACAGCGACACCGACTCCGACGAGCCCGTGCGTCGTCCCAAGCGGCTCAGCGCCAAGGACGCACAGCAGCAGCAGAGCAAGGCCAAGGCAGCGGCGGTGGCCAGTGGCAAGAAGGTGGCACCCAGCCGACGCCCCAGCGGCAGTGACGATAGCGACGACGATGATGAGGAGGAGCCCCAGCAGCAGCAGGCGCCACCTGCCTCCGGCAAGCAGCAGTCACAGGGCGCCATCCAGCGACCCAGAGCTGGGAATCGCGCCATGAGCAGCGGTGCGGGCAAGGGACGCGACTATGATCTCAGCGAGATACGTTCGGAGCTGAAGGGGTTCCAGCCACAGATGCTGGAGCGCAAGGATGCGGCCATCAAGAGCGAGCCCAGCGAGCTGGGCAGCGCCAAGCAGGAGCCCAAGACGGGCAGCTCCACGGAGCAGTCATCGGAGACGGACTCCTACATCGACGAGGACTCGCAGTCCTCCGAGAAGCTGCCCTATCGCAAGCAGCAGCAGCAGCCAACGACGACAGCTGGGGACAAGCGCAAGGTTGCGGCAACCACTGGAGCAGGAGCAGCAGCAGGAGAAGCTAGCGAAGTCAGCGTCAAGAAGGAGTCGGAGAAGCTTCACATCAAGCACGAGGCGGGCCTGGAGCGGAAGCCCTTCAAAGCGGAGCCCAAGGATGAGCCGGCGAAGCCGTTCCACAGCGGCGCCGACATCAAGCCGACGACGACGACGACCACGTCCTCCTCCTCCATCATAGCGCCAGCGCGCTTTGGCGCCAAGTGCACCTCGGTGATAGTGGAGAAGCCGCTGACCATAATCAAGAAGGCGGAGAAAACAGAGGCTCCCAGCACATCAGCAGCAGCAGCAGCAGGAGGAGGAGCGACGACGACGACTCCTGTGCCCGCCAAGAAATCGGAGCTGCTGAAGAAGCAGCAGGCGAGCAACTCAGCCGCCTTGGATGTGGGCAAGAAGTTTGCGGAGCCCAAGGAGACGGCCACACTGAAGGTGGAGCTGCCCGCGGCCTGTTCGCCCTCATCGTCTAGCAGCTCCTCGAGCTCCTTCTGCTCGAGCAGCAACAACTCGGCCGGCACGTCCGCCAGCCTGAGCAGCTCCTCGGCCACGCGCTCGCTGCCGGACATGAGCAAGCTGGAGATAAGCAGTGGCGCCACAAGCACCACCAACACCACCGCCACAGCGGGCACCAGCAAGGAGTCCAAGTATAGCAGTGGAGGATCGGGTGGAGGAGCTGCTGCTGCTGCTGCTGCTGGCACTGGAGCTAGAGGCGACATCAATCATGGCAATCTGACGAGCGGCATCAAGCTGCTCTCCTCGGACGTGTACGAGTTCAAGGACACGGAGCCCTTCGAGTTCGAGAAGCGCATCTCGCCCATGGCGGCCATCAGCTGCAGCGCCACCTCCCCTCCAGCAGCAGCAGCAGCAACGCCAGCGGCGGCGGCGTCATCGTCTTCATCCTCGTCCCTGGTCATTGTCAGCTCGTCGGCTCGCAAGCAGGCGCTGAAGGCGAGCGCCATGGCCCAGAGCATCGAGCAGCATCACCTGGCGCACGGCTATGCCGGAGCAGCGACGACAGCTGGAAGTGGAGCCAGTGGTGCAGCGGCTGCGACGCCGGCCAAGGGCAAGAAGCGCGGCTCGCCGCTGAAGGAGTCGAGCCTGGCGAACCCGGATAAGCCGAAGCTGCTCAAGCTGGAGCAGCCAGCAGCTGTCCCAGTGCAATCCTCGCCAGCAGCCAGTCCCAAGGCGGCGACGTCCACAGCTGCCGGCAAGGCTGGAGCCGGATCAGCTCCAGCTGCTGGCAGCGCCCAGCTGACGCCTGGTCATCCGCATGCCACGCCCTTCGACGTGCTGCGCAAGTCGCCCAGCTTCAATCTGAATATAACGGCGCTGAACGAGGAGCTCGCCCAGACGGTGCAGGAGACGACGCGTGCCCTGACCGATGCACTGCAGCCGCCCACAACGCCAGCCACGCCGCCGGCTCTGGCGCCCAGTGCAGTGCCGCCCAATGCATCAGCGGCCTTTACGCCCGTCATTGCGGTGCCCGTCTCGCCCAAGCTCAGCACGCCGCCCCACGCAATGGGCGTGGCCAAGAGCACACAGCAGCAGCAGCAGCTGGTGGGCAGTCCCTTCATGGAGACGCGCAACGTGTTCGAGCTGAGCACCTCGAACGAGGGCAGCGGCTACAGCTCCGGCGAGTCGAACAAGGACAACAAACTGGAGAAGCTGGAGAACGTGAAGATTCTGCTCGCTGGCTCCGGCGCGGGCTCCTTCGATCTGGATGCGGTCAAGTACGAGCAGAAGCCGAGCTCCATAGCGGACAAGGTGCTCAAGGCCATCAGCCAGAAGAAGGAGGAGGTGGAGCAGAGCAAGACCAAGATTCACATCCAGCCGGAGAGCAACACGGAGCATAAGGAGGAGCATCCGCCGCATCTGCATCCCCATCCCCATCCCCATCCCCATCCGAGCAGCCTCAAGCTGGAGCCCAAGCTGGACACACTGAAGCTGCTGGGCGAGCCGCTCAAGGTGCAGACGGGCGCCGTCGGGCTGCCGTCGGTGCTCAGCGAGCTCTACCGCCGGACGAGCAGCAGCAACAGTCCGGAGACAAAGTCCATACTGGAGGCCTCGCTGCCGGCCAAGAACAGTGAGCTGAGCGAGACCATCCAGAAGCTCGAGTGCGCCATACAGCAGCGCAAGACTCCAGTGGCGGGCCAGTCGCTGGCCTCCTCGATAGCCGGAACGCCGCCGGTGACGGCCACCGTGGGCACTGCTAGCTTCTCGGACGAGTCCATGGACAGCACCGACTCCGAGCAGCGTCTGGTCATCGAGGACGTCATGGCCGAGGAGCCCACCACGGTCAGCGAACTGAAGAGTCCCGTCTCGGAGGCCTCGGGCAGCCTGACGGGCAGCACGCCGGTCAAGCTGGAGCTGACTGCGGCGGGCAGCAAGCAGCTGGCGGGCGTCCAGGCGCCCATACCGCTGAAGCCCATGATGCTGCTGCTGCCAGAGATGCCGCACGGCATCACTAGCTTCCCGGCCAGCAAGGAGCCAACCACAGTCGCAGCAGTAGCAGCTCCGCCCGCGACTCCGGCAGCAACTACGGCACCCGCACCCTCATCCGTGCTGCCTCCAGGCGTGCCCATTGTGCTGCCGGAGATCCCGGTCTCTGTGGTGGTTGCACTGCGTCACAGTCCCTGCACCGTCACTCCCGTCTCACCCAAGCCGGAGCCGAAGTCAACGCCAACGCCGATGCCGATGCCAATGCCGACACCGACGCTGACGCCCAAGCAGCACGAGCTTGGCGGCGGCCTGCTGCTGCTCAAGCCGTGTACGTCCCAGCTCATTCCGCTGCTGCCGGCGGCAGAGACGAAGGCATCGCCATCGCCGCTGCCACGCCCCTACGCACTGCAGCAGCAGGCCAAGGAGTTGCCCACGCACGTCTCGCCCGCCGCTGGCAGCCCGCTGACCAGCGAGATATCCCACGGCGAGCCGGCCATCAATCTGCTCTGCGAGGAGACCATACCGGGCAGTCCGGCGCCCCTCTACTCCGGCCGAGATGAGCTGACCAGCGGGCCGGGCAACGTAATTGTGCCGCCATCGGCGGCCATCGCCGCCGCCATAGGCTCGCCCATCTGCAGCAGCTCCACGCTGACCATACCGGGCATCTCGCCCCTGCCACCGGACACGCCTCCGCCACGTGCCACGGCAGCGCCTCTGGTCGGCCAGCCGGCTGCAGCGGCGGCTGCGTCGTCGGTGTCGCCCAACAGCTCGCCGGAGTCGCCGGCCAGCCAGGACGACAGCAGCGAGACGGGCAGCAGCAAGAAGCACGCGGAGCTCGAGAGCAACGTCCTCAGCGGCAGACGAAAGCGACGCGCCAAGGCCAGCGAATCGAATGTCCAGTCCGCCGTATGCCACTTCCTGGGCAAGCGACGCCGGCAGCAGATCAACAGCATGAGGAAGACCACAGCAGCGACGACGACAGCTGGCTCCGACACGGATGATACGTGCGAGAATGTGGTGACCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAGGCCACAGCCAGCACAACAGGCGTGCGTCCTTGTCCCTACAACTTCCTCGTGGAATTGGATCCCTCGCTCAGCGCCGAGCAGTGCATCTTAATCCTGCGCAAGCAGATACAGGATCTGCGCAAGGCCTACAACAGCATCAAGGGCGAGCTGGCGGTCATCGATCGGCGACGCAAGAAGCTGCGACGACGCGAGCGCGAGAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAGCTCTGTGCCTGA
Protein Sequence
MQQVDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKATPGQLRVGAVVEVRHPDRKENVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREMASKQDVPAVKAAFEFLDSSKLPAHWDRDSLFGLSNLTSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTTKNQWKVIAMRLGFTPCTLSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPPDTSKMETISKLAVANQTTIAASSSSSGGATATATTASGSGATATPVRAASTASQSATEESENTSESSVVVEPVKKQRKASAGKVKSLVEKYEEKSSSISSLGPVATAALNTANLGGAASSTAAAATSSASSSSSASASAAASAAATAAVTVKTEAEADVPLAKIKAASVSTRNSMEKEPSAAGSNASSKAASETQRSRDASPTAASGTGAATKKEKHQQRKQVEKSEEKRGKRKKDEITVEKIDTGDFVVGIGDKLKVNYHEKKSPSSHGSTYEAKVIEISVQRNVPMYLVHYTGWNNRYDEWVPRERIAENLTKGSKQKTRTISTSSANSGGAPAQAGGAAGSSSSNNNNNSGSSSNSGPPKDGAGKAEQQPPPGPGTGSGTSATLLHGLTKTPTSSAALSTQSASKRGRGRSDSMPPRSTTPSSVASNSSRTKSPAASQSLAQLKHKRPTRTLPMSSSSSNQARRISASASISANVSDASMGTDSDTDSDEPVRRPKRLSAKDAQQQQSKAKAAAVASGKKVAPSRRPSGSDDSDDDDEEEPQQQQAPPASGKQQSQGAIQRPRAGNRAMSSGAGKGRDYDLSEIRSELKGFQPQMLERKDAAIKSEPSELGSAKQEPKTGSSTEQSSETDSYIDEDSQSSEKLPYRKQQQQPTTTAGDKRKVAATTGAGAAAGEASEVSVKKESEKLHIKHEAGLERKPFKAEPKDEPAKPFHSGADIKPTTTTTTSSSSIIAPARFGAKCTSVIVEKPLTIIKKAEKTEAPSTSAAAAAGGGATTTTPVPAKKSELLKKQQASNSAALDVGKKFAEPKETATLKVELPAACSPSSSSSSSSSFCSSSNNSAGTSASLSSSSATRSLPDMSKLEISSGATSTTNTTATAGTSKESKYSSGGSGGGAAAAAAAGTGARGDINHGNLTSGIKLLSSDVYEFKDTEPFEFEKRISPMAAISCSATSPPAAAAATPAAAASSSSSSSLVIVSSSARKQALKASAMAQSIEQHHLAHGYAGAATTAGSGASGAAAATPAKGKKRGSPLKESSLANPDKPKLLKLEQPAAVPVQSSPAASPKAATSTAAGKAGAGSAPAAGSAQLTPGHPHATPFDVLRKSPSFNLNITALNEELAQTVQETTRALTDALQPPTTPATPPALAPSAVPPNASAAFTPVIAVPVSPKLSTPPHAMGVAKSTQQQQQLVGSPFMETRNVFELSTSNEGSGYSSGESNKDNKLEKLENVKILLAGSGAGSFDLDAVKYEQKPSSIADKVLKAISQKKEEVEQSKTKIHIQPESNTEHKEEHPPHLHPHPHPHPHPSSLKLEPKLDTLKLLGEPLKVQTGAVGLPSVLSELYRRTSSSNSPETKSILEASLPAKNSELSETIQKLECAIQQRKTPVAGQSLASSIAGTPPVTATVGTASFSDESMDSTDSEQRLVIEDVMAEEPTTVSELKSPVSEASGSLTGSTPVKLELTAAGSKQLAGVQAPIPLKPMMLLLPEMPHGITSFPASKEPTTVAAVAAPPATPAATTAPAPSSVLPPGVPIVLPEIPVSVVVALRHSPCTVTPVSPKPEPKSTPTPMPMPMPTPTLTPKQHELGGGLLLLKPCTSQLIPLLPAAETKASPSPLPRPYALQQQAKELPTHVSPAAGSPLTSEISHGEPAINLLCEETIPGSPAPLYSGRDELTSGPGNVIVPPSAAIAAAIGSPICSSSTLTIPGISPLPPDTPPPRATAAPLVGQPAAAAAASSVSPNSSPESPASQDDSSETGSSKKHAELESNVLSGRRKRRAKASESNVQSAVCHFLGKRRRQQINSMRKTTAATTTAGSDTDDTCENVVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQATASTTGVRPCPYNFLVELDPSLSAEQCILILRKQIQDLRKAYNSIKGELAVIDRRRKKLRRREREKKXXXXXXXXXXXXXXGKLCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-