Basic Information

Insect: Drosophila rellima
Gene Symbol: -
Assembly: GCA_035043635.1
Location: JAWNMV010000770.1:359907-361887[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0001 0.0072 16.8 0.8 1 23 138 160 138 160 0.97

2 5 0.04 2.8 8.6 2.3 3 23 168 189 166 189 0.96

3 5 0.00082 0.057 13.9 4.7 1 23 437 460 437 460 0.95

4 5 1.1e-05 0.00076 19.8 0.5 1 23 499 521 499 521 0.97

5 5 0.0081 0.57 10.8 6.6 1 23 527 550 527 550 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0001	0.0072	16.8	0.8	1	23	138	160	138	160	0.97
2	5	0.04	2.8	8.6	2.3	3	23	168	189	166	189	0.96
3	5	0.00082	0.057	13.9	4.7	1	23	437	460	437	460	0.95
4	5	1.1e-05	0.00076	19.8	0.5	1	23	499	521	499	521	0.97
5	5	0.0081	0.57	10.8	6.6	1	23	527	550	527	550	0.97

Sequence Information

Coding Sequence: ATGATTTGTCGCCTGTGCTTGAACACATTAGACGAGCAGAATGCAGTGCTGTTGTTCGCTTCCGCCGACAACGAGAGCATCGACAACAAGACAATACCGGAGAACTATTTGGTTCAATTGATATCAACGCATTTGTATCTCTGTCTGTCTCGCGACGATGCTATTTCCACGTCCATTTGCACGGATTGCTGTGCGCAACTGGAGAGTTTTCACAACTTTTGGAAGTTGGTGGAGCACAAACAGACAACGCTGTGCAGTCAGTTCTTGGAGATTGATTGCGATGTTAACTGGTCAGACGAGGGTGATGCTGAGCTGCAGACCACAAGCATAATCGATTTTAAGCAGGAACCTGAGCCAGACCTTGAGACAGACGCTTGTGGAGATGAAGgcaaggcagcagcagcccaCAAGTTTCCCTGCATGTTTTGCGACAAGTCTTTCAAAATGCGACGATATCTTGAGGAGCATGTGGCCACACACACTGGTGATCGACCCATCGCCTGCGCCTACTGCAACACGGCCTTTCGATGTCGCTCCAACATGTACACCCACGTCAAGACCAAGCACAATAGCCAGTGGCAAAAGGCTCGCGCTGAACGCGAATCAgccaaaatcaacagcaacaacaacattcaaatCCAAAGAAGTGTCAATGGTGATAACGATAAGCTTGTGGACGCAATTACCGTGCCGCCCAATGAACTGGAATTAACTGATCAAACGCCCGACATAAGGGTACCAGTTCCGCCTGCAGCCTCAGCTGTACCTTCGCCAGCTCCTATGCCCGTTCCAGTACCCGAAAAGATACCTCCGCTTAGCATTGCCACCGTTAAAACCGAACCCATGGAGGCAATAAATCTTACGGTAGCCAAAACGCATGCAACGCCAGTCAAGCGACTAACACGAGCTAGTCGCCGCAAGACACATTCTCCCAAAAAAGTGCAACACACCGAGCGCAGCGTCAGCGCCGGCGAGGATAGCAGCAACGATGCTATTACTGATTTGCATGAGAAACGCATCAAGACTGAGCTGCAGACATGCAAGGAAAACGAGCTTATGTTGGCCAACTACAATGCTGTGGCCGCAGTTGTGGCGGCcgcaacgcagcagcaacaccttTGCTCCACTATTATGCAGCAGCATCAAGAGCAGCTGCTCACTGCTATGGCTGCTGTCAGCACGAGCACGGCGGCAGCATCAGCCGTGGCGTTGACAAGCGAAAACAGTGTACCAACTCCAACTTCTGCTACTACACCTTGTCCTGCTCCAGCTGCCGCTCCCGTTCCGGCGTTACCTGCAGTTGAGCCATATACGTGTCACATCTGCGGCCAGCAGCTGCGCAATCAGCGTACTCTCAATAATCACCTGCATAATAAGCACAGTGGGATGCCGACATCGCCGTTGGCAACGTCCAGTACCAGCGTGGAAATTCCCATCTGCGGTAGTTGCGGCGAGTTGTCTGGCCGTAATCATCGCTGCCTAAGCAAAGCCAAATATGCCTGCGACGTGTGCGGAAAGTCTTTCAAAATGAAGCGCTATCTGGAGGAACACTTTGCCACACATACCGGCGTTAAACTACACACCTGCGCCTTCTGTCCCACTGAATTTCGCTCCAAGTCGAATATGTATCATCACACCAAACGAAAGCACAAACTCGAGTGGGAACGTTCGCGCGCCACCCGAAACGCTGCCAAGTCTGGTGCCTCGGAGCAAAATATAAATCCGGAGCCAGAGAAATCACCCGCAAATTACTAG
Protein Sequence: MICRLCLNTLDEQNAVLLFASADNESIDNKTIPENYLVQLISTHLYLCLSRDDAISTSICTDCCAQLESFHNFWKLVEHKQTTLCSQFLEIDCDVNWSDEGDAELQTTSIIDFKQEPEPDLETDACGDEGKAAAAHKFPCMFCDKSFKMRRYLEEHVATHTGDRPIACAYCNTAFRCRSNMYTHVKTKHNSQWQKARAERESAKINSNNNIQIQRSVNGDNDKLVDAITVPPNELELTDQTPDIRVPVPPAASAVPSPAPMPVPVPEKIPPLSIATVKTEPMEAINLTVAKTHATPVKRLTRASRRKTHSPKKVQHTERSVSAGEDSSNDAITDLHEKRIKTELQTCKENELMLANYNAVAAVVAAATQQQHLCSTIMQQHQEQLLTAMAAVSTSTAAASAVALTSENSVPTPTSATTPCPAPAAAPVPALPAVEPYTCHICGQQLRNQRTLNNHLHNKHSGMPTSPLATSSTSVEIPICGSCGELSGRNHRCLSKAKYACDVCGKSFKMKRYLEEHFATHTGVKLHTCAFCPTEFRSKSNMYHHTKRKHKLEWERSRATRNAAKSGASEQNINPEPEKSPANY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519512;
90% Identity: iTF_00534176;
80% Identity: -