Basic Information

Insect: Drosophila rellima
Gene Symbol: -
Assembly: GCA_035043635.1
Location: JAWNMV010000608.1:2383478-2388047[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.24 17 6.2 0.1 1 13 364 376 364 384 0.79

2 8 9e-05 0.0062 17.0 2.5 3 23 1002 1023 1000 1023 0.97

3 8 0.0029 0.21 12.2 3.0 1 23 1061 1083 1061 1083 0.97

4 8 1.5e-05 0.0011 19.4 2.8 1 23 1089 1111 1089 1111 0.96

5 8 5.2e-05 0.0037 17.7 0.9 1 23 1117 1139 1117 1139 0.98

6 8 0.00093 0.065 13.8 1.3 1 23 1145 1167 1145 1167 0.98

7 8 0.073 5.1 7.8 0.0 2 23 1174 1195 1173 1195 0.96

8 8 0.00073 0.051 14.1 0.7 1 21 1201 1221 1201 1222 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.24	17	6.2	0.1	1	13	364	376	364	384	0.79
2	8	9e-05	0.0062	17.0	2.5	3	23	1002	1023	1000	1023	0.97
3	8	0.0029	0.21	12.2	3.0	1	23	1061	1083	1061	1083	0.97
4	8	1.5e-05	0.0011	19.4	2.8	1	23	1089	1111	1089	1111	0.96
5	8	5.2e-05	0.0037	17.7	0.9	1	23	1117	1139	1117	1139	0.98
6	8	0.00093	0.065	13.8	1.3	1	23	1145	1167	1145	1167	0.98
7	8	0.073	5.1	7.8	0.0	2	23	1174	1195	1173	1195	0.96
8	8	0.00073	0.051	14.1	0.7	1	21	1201	1221	1201	1222	0.95

Sequence Information

Coding Sequence: ATGACACCCGTTGAGGAAGCTCGACAAAAATGCGGCACCGTCTACACCTGGAATTGTGCTGGCGAACTTTATGGCATCGAGTGTGAACTCTGCGAGGAGCGTCCCCTCTGCGCCCTCAATGAGTTCGCCGAGCATATGGAGCTCTGGCATTCCGATTGGACAGCTCAAGAGCCGCCGGAGGACGAGCTGATGCTGGAGGTGCTCGCCGAACAGTCCAGCGGCGGGGAGGTCAATGAACTCAAGCAGCAGCTCGTCCAAGAGCTGAATGCCCTTGACACGCTGTCGACGACGagccaccaacaacaaaattatcaaaatgatCAACATGATCATCATGATCAACATGATCATCATGATCAACATCATCAGCTGCCGCTTAATCTCAACGAACGACGGCATCATTTAGACAACAATAGTTCCCAATCCACATTCGATAACCAGAAGCTGACAACGGAGCACGTCCAGCATTTAATTGAGCTTTATCGCGGCGAGACACGTCTATGGAATCAGGCACATCCGGAGTTCCGGAACATGGAGCTGGGCCGTGAATCGTGGCGACAAATCACGGACGCTTGGAGCGCACATTGTGGTCGCCGTTTCAGTGTGACGGATGTGCGGATCAGAATCTCAACGCTGTGCCAGCGATTTCTGAAGCAGCGCGAACGTCTGGACGCCGAGGGGGAATTGGAAGATAGCGCCAAATTCGTTCACTACGATCAATTGAAGTTTCTGTGCGAACAGCAGGCGCTGCTGAAGCGTCGCGAGCATTTTGCGAGAGAGAATCGCAAACTGTTGGAGATCTATGAGCATTATCCGATCCTCTGGCACAATGCTCACAAACGTCTGCGCTGCGTGGAGACGATGACGAGGCGGCACGAGGCCCATCGTGGCCTCCAGTTGGCGCTGCGAATGTGCGACATTAAGTTATCCGGTCTCGCCATGCAGCGTCGCCTTCAGTCGCTGCGGAAGCGCTATCGGCTGGAGAAGATTCGCTATTTGCACAGCGTTGTCGAGGGCAAACAATCGGAATTTGTCTCCACCTTTGAGCATTATGCCGAGATGGAGTTTCTACACAAACATATCGATCCGTTTGTGTGTGCGGTGTGTGGCAAGATCTTTGAGAATCTGGTGGGGCATCAGGCGCATGTCCAGGGCAGCTGTGAGGCTCAAACTGTGCTCAAGGAGCACATGCCGCTGGCGGAGACGGAGGCGACCGTGGGGGAGCTAATGGTGCAGCTGGAGATGGAGGGGAATCTgctggaggagcagcagcagcagaagatgGAATCTAACCAGAAGTTGGAAGAGGCTCAACAACTGGAGGGGAGGCAAGCGGAGATGGaacagcagctggaggagcagTTGGCGGAGGAGGATCACGTCAAGATGGATCAGCTTGAAAGGAATCTGTTTGAAGGGGTTCACATCCAGGAGGAGCACTTGGCGAAGGAGGATCACGTCAAGATGGAGCAGCTTGAAAGGCATCTGCTCGAAGGGGATCACCTCCAGAAGGATCAGCTGGAGAGGAATTTCTGCAAAGGGGTTCACATCCAGGAGGATCAGCTTGAGGGGTATCTCGTCGAAGGGGGTCACATTCAGGAGCATCAGCTTGAGGGGAATCTCGTCGAAGGGGATCACATTCAGAAGCATCAGCTTGAGGGGAATCTCGTCGAAGGAGATCACCTCCAGGAGGATCAGCTTGAGGGGAATTTCCTAGAAGGGAGTAACCTCCAGGAGGATGAGCTCGAGAGGAATCTCCTCCAAGGGAACCACATTCAGGAGGATCAACTCGAGAGGAATCTCCACGATGGAGTTCACATACATGAAGATCAGCTTGAAAGGAATCTCCTCCAAGGGAACCACATTCAGGAGGATCAACTCGAGAGGAATCTCCACGATGGAGTTCACATACATGAAGATCAGCTTGAAAGCAATCTCCTCGAAGGGAACCACATTCAGGAGGATCAACTCGAGAGGAATCTCCACGATGGAGTTCACATACATGAAGATCAGCTTGAAAGCAATCTCCTCGAAGGGAACCACATTCAGGAGGATCAACTCGAGAGGAATCTCCACGATGGAGTTCACATACATGAAGATCAGCTTGAAAGCAATCTCCTCGAAGGGGATCACCCCCAGGAAGATCACCCCCATGCGCGTCCCGAAGAGCAACTGCTAATGGAGGATGAGATAAGAACGCCACTTCATAGCCTAGCTGAAGCCTGTGTCGCCGCCAACCTGGAAGAGCAGCTGCCCCGCAAAGAAGCAACCCACATTCCACGGACCGAGGAATCCTCCGAGGACAGTCTGCCCTCCACTCAGACCAAGTTGCGAGTGCGTCTGAGCTTGCAGCAAACGACTAAACTAATTGAACTGTATCGGGCACATCCCAATCTGTGGGATCCCAATCATTTGGATTATCATGCGCGCAAACAGCGTCGACAGGCGTGGCACAATATTGCCAGCGAGTTGAATGATTACTCCGCTGGCAGGCAACAACGTTACAGCTGGCAAATGTTACATAGGAAACTCACAGACTATACCAAATATTATCGGAGGGAACGGCAAAGGGAGGCGCTGGCCGAGGAGGGCGAGGGCGCAGGGACACGCTGGAGTTTCTACGATGCGTTTGGCTTTCTGGACGACGTGCTGCCCATCAGTTGTGTGCTCCAGAAATCGCTGCAGCAGCGGGACAGCAATCTAAAGATTATCCAAGTCTATCAGAGCTACGAGCAATTGTGGTGCACAAATCATCCGGATTATACGAAGCgcaagcagcgacagcgacagttGGAATCGCTCTGTACCCGCCTCCAAGAGGAGTGCAATCTGCAGATAACCGTGGAGCGTCTAAAAAATCGTTTAATCGAATTCCGTTGTCAGTATCGACAGTGCAAGGAGTCGCGACAAGCGGCCTTAAAGATGGGCGAGACCAATTGGCAGCCCAATTACGAGTATtatcagcagctgcagtttcTGGAACTGCACGTCTCCCCCTTTGGCTGCCACTATTGTCCGGCGAGTTTCAAGCGGCGCACGGACTTTTTGCGTCACCAGCGTAATGTTCACATGGACGAACTCGAGCAATTGGACGGGGTGCAGGGACATTTGCGCAAGAGACGGGGAAAATGTGGTGCTGGTGGCGTTATCGCCGCCTCGACAGTTGTCAATCCTCTCGAGCACATTTGTCACATTTGCGCAATGAAATTCTCGCTGCGCACCAGTTTATTGGCCCATCTGCGACGGCATCTTGGCCAGCGGACACACGCCTGCAACGAGTGTCCCAAGAAGTTCTTCAACTCGACGTCATTGCGCGTCCATCAGCGGAGTCACACCAAGGAGCTGCCCTACGTCTGTGAGCATTGTGCTCGGGGATTTGTGAATGCCAGCAAGCTGAATCAACATGTCAAGCGGCATGCGGAGAAGCGGGATTATCCATGTAGTCGCTGTGACAAGGCGTTTTATACGGCCCACGAACGGGATCGTCATCTGCGGGCCCATCTCAATATCCGGGACAAGGTCTGTCCATATTGTGCCCGCGCCTTTGTCGTCGGCAGTGCGTATTATGCCCATCTCAATTTGCATCGCGGCGAGAAGCGTTACAGCTGCTCGAATTGCGGTCAACGATTTGCCCAATATGCGGGTCTCTACAAGCATCGCAAACGTTGCACTGTCAATGCGCTGGCTATGAGTGAGAAGTGA
Protein Sequence: MTPVEEARQKCGTVYTWNCAGELYGIECELCEERPLCALNEFAEHMELWHSDWTAQEPPEDELMLEVLAEQSSGGEVNELKQQLVQELNALDTLSTTSHQQQNYQNDQHDHHDQHDHHDQHHQLPLNLNERRHHLDNNSSQSTFDNQKLTTEHVQHLIELYRGETRLWNQAHPEFRNMELGRESWRQITDAWSAHCGRRFSVTDVRIRISTLCQRFLKQRERLDAEGELEDSAKFVHYDQLKFLCEQQALLKRREHFARENRKLLEIYEHYPILWHNAHKRLRCVETMTRRHEAHRGLQLALRMCDIKLSGLAMQRRLQSLRKRYRLEKIRYLHSVVEGKQSEFVSTFEHYAEMEFLHKHIDPFVCAVCGKIFENLVGHQAHVQGSCEAQTVLKEHMPLAETEATVGELMVQLEMEGNLLEEQQQQKMESNQKLEEAQQLEGRQAEMEQQLEEQLAEEDHVKMDQLERNLFEGVHIQEEHLAKEDHVKMEQLERHLLEGDHLQKDQLERNFCKGVHIQEDQLEGYLVEGGHIQEHQLEGNLVEGDHIQKHQLEGNLVEGDHLQEDQLEGNFLEGSNLQEDELERNLLQGNHIQEDQLERNLHDGVHIHEDQLERNLLQGNHIQEDQLERNLHDGVHIHEDQLESNLLEGNHIQEDQLERNLHDGVHIHEDQLESNLLEGNHIQEDQLERNLHDGVHIHEDQLESNLLEGDHPQEDHPHARPEEQLLMEDEIRTPLHSLAEACVAANLEEQLPRKEATHIPRTEESSEDSLPSTQTKLRVRLSLQQTTKLIELYRAHPNLWDPNHLDYHARKQRRQAWHNIASELNDYSAGRQQRYSWQMLHRKLTDYTKYYRRERQREALAEEGEGAGTRWSFYDAFGFLDDVLPISCVLQKSLQQRDSNLKIIQVYQSYEQLWCTNHPDYTKRKQRQRQLESLCTRLQEECNLQITVERLKNRLIEFRCQYRQCKESRQAALKMGETNWQPNYEYYQQLQFLELHVSPFGCHYCPASFKRRTDFLRHQRNVHMDELEQLDGVQGHLRKRRGKCGAGGVIAASTVVNPLEHICHICAMKFSLRTSLLAHLRRHLGQRTHACNECPKKFFNSTSLRVHQRSHTKELPYVCEHCARGFVNASKLNQHVKRHAEKRDYPCSRCDKAFYTAHERDRHLRAHLNIRDKVCPYCARAFVVGSAYYAHLNLHRGEKRYSCSNCGQRFAQYAGLYKHRKRCTVNALAMSEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -