Basic Information

Insect: Drosophila rellima
Gene Symbol: -
Assembly: GCA_035043635.1
Location: JAWNMV010000236.1:3192475-3204905[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.064 4.5 8.0 0.6 1 23 731 753 731 753 0.95

2 7 1.8e-05 0.0012 19.2 1.1 1 23 759 781 759 781 0.98

3 7 3e-06 0.00021 21.6 0.2 1 23 787 809 787 809 0.98

4 7 1.7e-06 0.00012 22.4 1.2 1 23 815 837 815 837 0.98

5 7 0.00049 0.034 14.6 1.8 1 23 843 865 843 865 0.97

6 7 5.3e-06 0.00037 20.8 2.4 3 23 873 893 871 893 0.94

7 7 5.1e-05 0.0035 17.7 0.6 1 23 899 922 899 922 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.064	4.5	8.0	0.6	1	23	731	753	731	753	0.95
2	7	1.8e-05	0.0012	19.2	1.1	1	23	759	781	759	781	0.98
3	7	3e-06	0.00021	21.6	0.2	1	23	787	809	787	809	0.98
4	7	1.7e-06	0.00012	22.4	1.2	1	23	815	837	815	837	0.98
5	7	0.00049	0.034	14.6	1.8	1	23	843	865	843	865	0.97
6	7	5.3e-06	0.00037	20.8	2.4	3	23	873	893	871	893	0.94
7	7	5.1e-05	0.0035	17.7	0.6	1	23	899	922	899	922	0.98

Sequence Information

Coding Sequence: ATGGCGGTTGAAATAACAAACTCAATATTATCGCTGCAACCAGCGGCTGTGGAGCTGGAGCCACTACAATCATTTCATTGGCAGCTCGAGGATTACGCATATTTTCACAAGTGCGGCGAAATAACAACATCTCCGGACGTGCAATCTTTCGGCTTCAACTGCGCCTTCTGTCCGGCCATTTGCCTGCAGTTTTCGGTCTTTGTCGATCACATACGCGGTCATCATATGCAGGATATGCGTCGGCGCTACGAGGTGGCCGATGAGAAAATCGAGCAGACAACGCAAACCGATTTAAATCTAATGCTAATGGACAGCAGCGATGGATTCCAAATggacgcaacaacaacaacagcaatggccACAACAAATGCGCGCCTTGATAAACGCACGAAAAAATCCAATTGGAATGATACAACGGTAACGACAGTGGGGTCGGCAGACACACAGAGCACTGTTACCATGGGACTGTTGGATGTGAGCATGGACATGGGCATAGACATGGCTGGCATTGTGAACTCAGTTCcacacaacaacgacaacaacaacaatgctacGCTATTGCAGCTAAgcaacgcaacaacaacaacatcgggAACAACAACACCCGCCGAAATAGACTTCGTTTATGTTATAGAAAATCCATTGCCACCCTCGCCCCCACCGTCGGCTGACATTTCGAGTGACGAGCAGAGTCCGCAATTGCTGCACTCGTTGCTAGATCCATTTGAAATGTTGCACGAGGCAAGCGCAGACAccgacacagacacacacatacactctctcacacacacacactcaacgcTGGAGGCGTGCTCCAAAGGCGCCCCTTGCGTCTCTGCCCCGCCACGTTACGAGACGCGACGCGTGGCAATGCAACGCAAGTTGGCAAAGACTGCAGAAGatgagcagcaacatcaacaacatcaacaacaacaacaagaggaaCAGCTACACTTACAACTTGAATTACAGCAGCGTCAACAACTGGAGGAGAATGTGCTGGAACTGACGCCTCCCGCAACGCCGCCAACGCCAGTGCCACCCACATCGCCCACGAGCAGCGTCGCCAGCAGCGTCGACTTGAAGTTGCGCACTCGTCGCGAACTCGAGCGGAATCGTGAATTTGTCAGCTCGCTTTTGTTGGCCTACGAGCGCAACGAGAAGTTGTGGAATCCCAAGCATCCCGGCTATAAGTACAATGCGAAGCGTAGTGTCTACGGCGAGTTGGCCGCGCCACTTCAGGCCGTCTTCCAGATGCCGCTGACGGGCGCCGAGATCTTCGCCGTGCTCAAGGAGCTGCGCGGTCGCTATCGCCGCGAGCTGAGCAAACTGAACTCGTTGGGCGGCAAGTTCAAGTCGCGCCTTTGGTACTTTGAGAAGATGCATTTCTTGCGCGGCGTCATCGAGCACAAACGGGCCGAAAGGGAGGCAAAGAGCGAGTCGACGGAGAGCGAAAAGTCCAGCGAGACGGACAACGAATCGACCACAAAGTCGGCGCAGTTCCGTGAGGTGCTCAGCTGCATCATTGATGCATTCCGGCGTCAGGAGAGCCTCTGGAATCCCCAGCACTTTGActacagcaactgttgcaagaAGGAGCTGTATCGGGAGATCTCGGCGGAGCTGCTCGAGGAGCTCAACTACGAGATGAGCGGCGAGGAGTGTTACAAGGAGATTCAAAAGCTGCGCACGCGTTACCGCAAGGAACTGCGCATGGTGATCAAGCACAAGGGTCTCTATCTGCCCAAGCTCTGGTGCTACGATGAGCTGGAGTTTCTGCACAAGATACTGCAGGACCAGATCTTCAATAAGATCAGCAAGAAAAAGGGCGTGGTGGAAACGAATCAGAAGACAAAGTTCATCAACGCCAGCTGCATCAGCTTCAGCACGCAGGAGGATCAGCTGCAGTTCGTGGAGATCTATCGCAACTATCCAGCCTTGTGGGATGTGGATCACCCGGACTTTCGCTCCAATGCCTATCGCAATCAGGCCTTGGGTCAAATGCTCGAGGAGCTCAACACGACATTTCAATGCGCCAACACGCCGGCCCAGCTGGAGAAGACGTTGTTTGAGCTGCGCAAGGAATTCTCAGCACAGAAACGGAAGATACTCACAAATGCGGCCGGATCCACGAGCATACCGCTGCTCCATGCCAAGCTGGGCCAGTATCTCGAACAGAATCTGGGCCCCTTTCGCTGCGGAGTGTGTGGCGAGCTGATCAAGACCTGTGATCAGTACAAGGTGCATCGCGCTGGCCACGATGGCACACAGCCATTTATATGCACACTCTGTGGCAAGGGATTCCAAATGCCCTGCAACCTGACGGTGCACATTCGCCGGCATCGACGCGACTTTCCCTATGCCTGCGAGCAGTGCGACAAGAGATTCGCCACATCCACCGAGGTGgccatacatatgcgcacgCACACCGGGGAGCGTCCCTACATCTGTGATCTGTGCGGCAAGTCGTTCAAGACGTGGTCATTCTTCGACATCCATCGGCGCACGCACCTCAATCAGTCGACGTTCCACTGCCCCATCTGCGATAAGGGATTCTACGAGAAGAATCGCTTCACCGACCACATGAATGCCCACTTAAACATTCGCAAGCATTTGTGCACCGTCTGTGGCAAGACCTTTACCACTTATGGCAATCTCAAGAAGCACACCGAGCTCCATCTGGCCGTGAAGAAGTACAAGTGTGCGGCTTGTGGCAAGCGCTTTGCCCAGTTCGCCAGTCTGCGGTGGCACCGCAAGCGGGAGCACAACTTCGAACAGAGTCAACAACAAGAGCACGAACAGccagaggaggaggaggaggaagagcaGCAGGAGGTGGTGATGGAGGAGTCATAA
Protein Sequence: MAVEITNSILSLQPAAVELEPLQSFHWQLEDYAYFHKCGEITTSPDVQSFGFNCAFCPAICLQFSVFVDHIRGHHMQDMRRRYEVADEKIEQTTQTDLNLMLMDSSDGFQMDATTTTAMATTNARLDKRTKKSNWNDTTVTTVGSADTQSTVTMGLLDVSMDMGIDMAGIVNSVPHNNDNNNNATLLQLSNATTTTSGTTTPAEIDFVYVIENPLPPSPPPSADISSDEQSPQLLHSLLDPFEMLHEASADTDTDTHIHSLTHTHSTLEACSKGAPCVSAPPRYETRRVAMQRKLAKTAEDEQQHQQHQQQQQEEQLHLQLELQQRQQLEENVLELTPPATPPTPVPPTSPTSSVASSVDLKLRTRRELERNREFVSSLLLAYERNEKLWNPKHPGYKYNAKRSVYGELAAPLQAVFQMPLTGAEIFAVLKELRGRYRRELSKLNSLGGKFKSRLWYFEKMHFLRGVIEHKRAEREAKSESTESEKSSETDNESTTKSAQFREVLSCIIDAFRRQESLWNPQHFDYSNCCKKELYREISAELLEELNYEMSGEECYKEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDELEFLHKILQDQIFNKISKKKGVVETNQKTKFINASCISFSTQEDQLQFVEIYRNYPALWDVDHPDFRSNAYRNQALGQMLEELNTTFQCANTPAQLEKTLFELRKEFSAQKRKILTNAAGSTSIPLLHAKLGQYLEQNLGPFRCGVCGELIKTCDQYKVHRAGHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACEQCDKRFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRTHLNQSTFHCPICDKGFYEKNRFTDHMNAHLNIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCAACGKRFAQFASLRWHRKREHNFEQSQQQEHEQPEEEEEEEQQEVVMEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00608653;
90% Identity: iTF_00585403; iTF_00602048;
80% Identity: -