Drel014078.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila rellima
Gene Symbol
-
Assembly
GCA_035043635.1
Location
JAWNMV010000811.1:16993752-16998353[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0016 0.11 13.0 2.0 1 23 209 231 209 231 0.96
2 25 0.1 7 7.4 1.3 1 23 237 259 237 259 0.97
3 25 0.06 4.2 8.1 0.7 2 23 291 312 290 312 0.96
4 25 0.032 2.2 8.9 2.2 1 23 387 410 387 410 0.94
5 25 0.13 9.4 7.0 0.6 1 23 451 473 451 473 0.97
6 25 0.065 4.5 8.0 0.4 2 23 492 513 491 513 0.97
7 25 0.0009 0.063 13.8 3.3 1 23 589 611 589 612 0.95
8 25 0.011 0.76 10.4 0.2 1 22 621 642 621 642 0.95
9 25 0.045 3.1 8.5 5.3 1 23 651 674 651 674 0.95
10 25 0.0002 0.014 15.9 0.3 2 23 701 722 700 722 0.97
11 25 5.4e-06 0.00038 20.8 3.7 1 23 730 752 730 752 0.99
12 25 0.0013 0.094 13.3 2.3 1 23 902 925 902 925 0.94
13 25 0.076 5.3 7.7 2.2 1 22 932 953 932 953 0.93
14 25 0.32 23 5.8 0.3 3 23 964 985 963 985 0.92
15 25 1.1e-05 0.00075 19.9 1.9 1 23 1010 1032 1010 1032 0.97
16 25 0.0011 0.077 13.5 2.4 1 23 1039 1061 1039 1061 0.98
17 25 0.02 1.4 9.6 0.0 2 20 1088 1106 1087 1108 0.93
18 25 0.012 0.87 10.2 3.9 1 23 1153 1176 1153 1176 0.96
19 25 0.02 1.4 9.6 0.4 1 23 1213 1236 1213 1236 0.96
20 25 0.00096 0.067 13.7 3.5 1 23 1258 1281 1258 1281 0.97
21 25 1.4e-05 0.00095 19.5 0.1 2 23 1309 1330 1308 1330 0.95
22 25 4.6e-05 0.0032 17.9 2.9 1 23 1336 1358 1336 1358 0.99
23 25 2.3e-06 0.00016 22.0 2.0 1 23 1364 1386 1364 1386 0.97
24 25 5.8e-08 4e-06 27.0 2.4 1 23 1392 1414 1392 1414 0.99
25 25 0.00099 0.069 13.7 0.2 1 21 1420 1440 1420 1444 0.91

Sequence Information

Coding Sequence
ATGTTGCCGACCGATATATGCCGCACATGTGCTCTACATGACGTGCATTTGTTGGCGCTCTCAACGTGCAccgaaaaatatgcaaacaaaagtttctatgACATGTTGCATGAATTGACACAAAACGATCCCTTAATGGAACATTTAGATGATAATCTGCCCCAGTATTTGTGTGGCGACTGCCTGCGTAAACTGGAAGAGGCCTATGCATTTGTGCTGCAAGCACGTCAGGTGCAGGAGCAACTGTTGCACCAAATACGCAAAGGACTGCAGTGTTTGGATGAGACACCCATAGACATAGCTCCGGAGCACATAAAGACAGAAACAGACCTTGCCTTGGAGCAATCCAAGGACggacaaaatgaaaaagttgCAACTGTGCCTGTTGCATCTTTAAAGATGCAACCGGAAAGTGAGACCGACAGCAGCCCGAACGACGTGACTGAAAATGATGTGCTAGACTTTAAACCTTCACAGCTGAGACGCAGCACTCGGAAGACAAAACTTGGAACAGACAGCGAAAATGAAACAAACTCTGAAAAGGCAAGTGCAATGCCGCTCAAGCGTCGTCGCGGCCGCCCTGCACGTATTCCCAAAAAGGAAACAATCAACAAGGACGGACGCCATGCGTGCGAGGTGTGTGGCAAGACGTTTTCGTGGCATCGCGACATGCAACGCCACGCTCGCGTACACTACGAGCAGGCTGGCTATGTATGTGACAGCTGTGGCAAGGGATTTCTCCGCAAGGACAAGTACATGTTCCATTTACGATCGCACGAGAAGCGCCAAGCCAAACGGCAGGCTCTTCAGCTGGGCAACGAATGGCGCTTTGCAGAACGCCTTTACAGCTCGGGACGCCTCAAGCGTGTGGAGTGTAAGTTGTGTGGCTTGAAATGTCAGCGGATTCAGGAACTTCGTGAGCATCTGGCCAGTCATGTTAGCATTGAAACATTGTCGAATCTCAGCGCCAATAGCGATGTTATCTTGGAACACTTTAGTGACCAGCAGCTTGACTTGATGCAGATTAAGCAGCAAGTGTGTGCTGACATAGCCAATGGAAGAGATCACCTGGATAAATACTGTGTGGTAGTCAATGCACATGGCTATGAACTCTGTTTGAGCGACTCCGACGAAGAGTTGGCAGGAATACCGCCTTCATACCAATGCCACCCTTGCAACATTCTCTTCTCGCGCAAATATCGCCTGATGCGGCACACGCTTGAGGAGCACACTCAACCGACATCTGAGACAATTCCCTGGCAACGTTGCAACCATTGCCAAATTGGCTTTGTGTGCGTTAAGCTGCTAGACCAGCATCAGCGAACACAGTGCCACAATCAGATGAAACGCTATAGTTGTCCCAACTGTCCAGGCAAATTTATTTGGCAGCAGAACCTGTTACAACACGCGTGCTCCCATCGCATGAAATCTTCGGAGACACATTCTCTGGAGAGAAGTCAACACCGCCATATTCAGTGCTGCCTTTGCGATGAGCAATTGCAAAGTATGTCGGCACTACGGGCTCATCTTATAACACATGGCGATGGTCGAAGCGGCATTGATCCTGATAGACTTTCCATCTTCTTTCGTTGTAAATATCCCGATGGTTCCACCTGCAACCAGACGGAGCTCAGCACACGTATTGCGAAAGATTTTGACGCAGAAGATTATGGCCGATACTTCAATGCCTGCACTGGCAGCGGTCAGGAGCTGGATTTCTTTGACTCTGATTCGGATTTAAGCGATCAGTCAGCCGCAGCTGTGCATTCATGTGAATTGTGTGGTGTGAGCACAAAAAGCCTTTCCCAACTCCTGAAGCATCAACAGAATCATCACAGTGAGGTGTATGACACATTGACTCACGTGTGCGACAAGTGTGGGCTGGGATTTGTGGCTAAATCGCTGCTTGGGCAGCATCGTCGGCGCATTTGCGCGAAGCGTCATGCAAAGTACCATTGTCAGCATTGCAATATCCATTTCATCTGGCAGTCCAACTACGAGAGACACATGGAACTGCAGCACGAAGCAGAGACAGATGATGTCCCTGATAGTGTGCCCAATACCAGGCTGAGGAGCAAACGCCAGCAGGCTGCCGAACTACAGTGCAATGAATGTGAAAAGGTCTTCATCTGGCCAAAGGATTTGACACGTCATAAGCGCATTCATCAGCCGCAGGCATCGGCACAGTACGAATGCACCTACTGCGAGCGCAAGTTCCATCGCAAGGATGGCCTCAAGTCCCATATGCGTGTCCATAGCGAGCAGCATTCGGATGCGACGGTTATGCCTAACAGCGATGCGGATCCGACGGCATTACAGCGAATGCCTATGGTATTGACGCAATTACGCCAACCAAATGGATGCAAGCTGATTCAATGCATGATCTGCCTCTCTCGGCACACGAAGATCTCTGATCTGCGCATGCATTTGATGAAGCATCAGTTTGCTGTGGAATTTACGGAGGAGCGTGCCAAGCCTGAGAACTTAACGAGTATCTGCCGGGCCCTATATCCGGAGCAGGTGAATCTGCTGGCTAAACAGCAATTAATTGAACGCATCCAAATGGATGTGGCCATGGGCACTGAGCTGGAAAGATTCATTTCAATAACCAACGAGGCAGGCATTGAGCTTAGCTTGGACAGCAGCGAAACTGAAACGGATTCGGACTCGGCCGAAGTGGAACAAAGCAGCAGTGGACGACAATACTATTGTAATCTTTGCCAGTTGAACTTTCCACGTAAGCATCAACTCTATGCCCATCAGCTGGACCAGCATACATGGGAACAGGCAACCCACATTTGTACGCACTGTCAGGCCAGATTCATCAGTGACCAGTTGCTGGAACACCACTACCGTAGTCTCTGTCGCAATGTCCACAAACGTTTGCTTTGTCGAAAATGCCCTTTACGGTTTCGCTGGCGTGACAATCTAAAGCTACACGCGGACGTAGCGCATCAGGAAACAACTGGAGAACAGGCGAACTTGAGCATCCAATTGGATGGTGCAAGTCTTCGTCCTGTTCTCAACTACGACTGCACCGAATGCAATCGCAGCttcaaaatgcaaaaggaTCTCACCAGGCACACCCTGATGCATGCCCAGGAATCGAGCATTTATCGGTGTCGTTGGTGTGCCCGTCGCTTCTATCGCCATGCTAATCTCTTGCAGCACATTGAGCGTCATGGAATTAATGCCGCACAGCTGCCTTATGCCGAGTCCCTGCTTAATGCGAGCCGTCATCCCCATGGGCAGAAGTGCATCCAATGCAAGGTGTGCGATATTCAATTTCCTACAATTGCAGCACTACGTTCCCATTTGGCCTCCACACCGAGCGGGACTCATCATGAAATTGGATCGATGCTCAACTACTCGATTACCAATCAGCTGGGCTATGAGCTGCACCTGGAAGACTCGGAAACGGAGGAAGAGGCCAAGCCGCCGGGCATACCCACGCACTACACCTGCGGCATGTGTCAGCTGCGTTGTGTCCGTAAATATGAGttgcatcagcatcagcaggcCATGCATCGATTAGAACGGATCACGGAGGGCTGTGATCAGTGCATCTATAAGAGCGTATCCCCACATCTTATCGCCTATCATCGGCGTGTGCAATGTTGCAACACAGAGAAGCAATTTAAGTGCGTCAACTGCGGCTACAAGTTTATGTGGGAGTCGAATCTGCTGCTGCACATTCAATTGCAGCATCCAAGCAATGCTGAGACACCAGAAGTGCCTGCACCTGAGAAACCCACAGCGGAGTGTCAGATCTTTCAGTGCGGTCAATGTCCACGTAAATACAATCGCAAGGATCGACTGACAGCTCATGTAAAGAAGTGTCATGCACCTGGCGCAGCTGATCCAACAGCCTGTCCAACAAAAACATCGACGGCTTCAAGTGTCGccaaacaacagaaaagttttctCTGCGCCTTTTGTGGCAAGGCGGTGAGCTCCTCCTCTAATCTTATTATCCACATTCGTCGTCACACCGGCGAGAAGCCCTTCAAGTGCGACTATTGTGACATGGCTTTTCCCCGCTCCTCCGATCTGCAGTGTCATCGACGCACTCACACTGGCGAACGACCGCATGTCTGCACCGTGTGCCAAAAGGGATTCGCGCGCTCCTACAAGCTCCAGCAACATATGCGCATCCACAATGGTGAACGTCCGTACAAGTGTACCTACTGTGACAAAAGCTTTACACAATCCAATGATCTCACGCTCCACATACGACGACACACCGGCGAGCGACCCTATCAATGTGACACCTGCGGGGAACGCTTCATTCAGGGCACAGCACTCAAGAATCATCGGCTACAGAATGGCCATTTCGAGACGGGGGATGGCctagcaaaaaataattaa
Protein Sequence
MLPTDICRTCALHDVHLLALSTCTEKYANKSFYDMLHELTQNDPLMEHLDDNLPQYLCGDCLRKLEEAYAFVLQARQVQEQLLHQIRKGLQCLDETPIDIAPEHIKTETDLALEQSKDGQNEKVATVPVASLKMQPESETDSSPNDVTENDVLDFKPSQLRRSTRKTKLGTDSENETNSEKASAMPLKRRRGRPARIPKKETINKDGRHACEVCGKTFSWHRDMQRHARVHYEQAGYVCDSCGKGFLRKDKYMFHLRSHEKRQAKRQALQLGNEWRFAERLYSSGRLKRVECKLCGLKCQRIQELREHLASHVSIETLSNLSANSDVILEHFSDQQLDLMQIKQQVCADIANGRDHLDKYCVVVNAHGYELCLSDSDEELAGIPPSYQCHPCNILFSRKYRLMRHTLEEHTQPTSETIPWQRCNHCQIGFVCVKLLDQHQRTQCHNQMKRYSCPNCPGKFIWQQNLLQHACSHRMKSSETHSLERSQHRHIQCCLCDEQLQSMSALRAHLITHGDGRSGIDPDRLSIFFRCKYPDGSTCNQTELSTRIAKDFDAEDYGRYFNACTGSGQELDFFDSDSDLSDQSAAAVHSCELCGVSTKSLSQLLKHQQNHHSEVYDTLTHVCDKCGLGFVAKSLLGQHRRRICAKRHAKYHCQHCNIHFIWQSNYERHMELQHEAETDDVPDSVPNTRLRSKRQQAAELQCNECEKVFIWPKDLTRHKRIHQPQASAQYECTYCERKFHRKDGLKSHMRVHSEQHSDATVMPNSDADPTALQRMPMVLTQLRQPNGCKLIQCMICLSRHTKISDLRMHLMKHQFAVEFTEERAKPENLTSICRALYPEQVNLLAKQQLIERIQMDVAMGTELERFISITNEAGIELSLDSSETETDSDSAEVEQSSSGRQYYCNLCQLNFPRKHQLYAHQLDQHTWEQATHICTHCQARFISDQLLEHHYRSLCRNVHKRLLCRKCPLRFRWRDNLKLHADVAHQETTGEQANLSIQLDGASLRPVLNYDCTECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRHANLLQHIERHGINAAQLPYAESLLNASRHPHGQKCIQCKVCDIQFPTIAALRSHLASTPSGTHHEIGSMLNYSITNQLGYELHLEDSETEEEAKPPGIPTHYTCGMCQLRCVRKYELHQHQQAMHRLERITEGCDQCIYKSVSPHLIAYHRRVQCCNTEKQFKCVNCGYKFMWESNLLLHIQLQHPSNAETPEVPAPEKPTAECQIFQCGQCPRKYNRKDRLTAHVKKCHAPGAADPTACPTKTSTASSVAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRLQNGHFETGDGLAKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00558059;
90% Identity
-
80% Identity
-