Basic Information

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.19 3.8e+02 1.6 0.0 13 67 33 89 22 101 0.73

2 3 1.7e-10 3.4e-07 30.6 0.0 13 89 139 205 132 205 0.81

3 3 5.4 1.1e+04 -3.1 0.1 77 85 268 276 259 278 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.19	3.8e+02	1.6	0.0	13	67	33	89	22	101	0.73
2	3	1.7e-10	3.4e-07	30.6	0.0	13	89	139	205	132	205	0.81
3	3	5.4	1.1e+04	-3.1	0.1	77	85	268	276	259	278	0.76

Coding Sequence: atgaataataatacacAAGAACATCTTCGGTGCAGTAGAAAAGGATGTAGTTATACCACCAATAGATCGTACAATCTAGAGCGGCACGAACGCAACCATGACAAAGGCAAGGTACCCGTATCCCAGTGCCAACCATGTCCGCATTGCACATATGCCGCTGGATCACTCCACAATTTAATGCGACATATTAGCAAAAAGCATGCAATATTAACTGTAAAGAAGCAGAAGGGGCAACTCATTTGCAGTCAATTGGAGCAGCAGTCGACTAAACACTCAAGAAATAGAAACGAAAAAGAGGAATCAGAAAGGCGAGGAGAAACTCCAGAGCAACAGTTTTGGACATTTGACGATGACCAACCCTGGAAGCCTTCGCTTTGGCTTTGGAATACACCACAGCAACAGGAGAAGAACTTCTTAAGGCGCAGTGCTCTGAACGAGGAGTGTAAGATACTTGGCCGGACCGTCAAGATGTTCAAGTTGTACTCTTTGGTGACAGCAAGAGGAGGAGCCCTTAATGTGGATGAATGGGACGATGTGGCGGCAACCTTGGGTTTTGGCCCTGGATCAGGTGAAGATGTACTTGCCAAGTACATGGATGTGCTTATTGAATATGAGAAAAATGAGGAAGATCGATTAAAGGATTGTGAGAGTACCGAAGGAGTTCCTTCTTGGTGGGACGACGGTGATTTTATCATTGATTCCGAGAGTTGTAAGCCAGACGATTCACATTTGGAAAGCGAAAGTTGGACTGATGATGAAAGCCCGTCCATTGATATTGAAAACGGCACTCTTAATATGATTTTCAACAATTATTATACGAAGTATCTCAATAACAGCAAACCGTTCAAACGGTTTCAAGTAAAGGACTCGTGGCTTTGTGCCACAATGTTGAACTATCAAGAGCTAATTTaccaaatgcattttaaacaTTATACTGATCCTTGA
Protein Sequence: MNNNTQEHLRCSRKGCSYTTNRSYNLERHERNHDKGKVPVSQCQPCPHCTYAAGSLHNLMRHISKKHAILTVKKQKGQLICSQLEQQSTKHSRNRNEKEESERRGETPEQQFWTFDDDQPWKPSLWLWNTPQQQEKNFLRRSALNEECKILGRTVKMFKLYSLVTARGGALNVDEWDDVAATLGFGPGSGEDVLAKYMDVLIEYEKNEEDRLKDCESTEGVPSWWDDGDFIIDSESCKPDDSHLESESWTDDESPSIDIENGTLNMIFNNYYTKYLNNSKPFKRFQVKDSWLCATMLNYQELIYQMHFKHYTDP

Sequence clustering based on sequence similarity using MMseqs2