Basic Information

Insect: Drosophila quinaria
Gene Symbol: -
Assembly: GCA_035047525.1
Location: JAWNPO010000455.1:21373897-21375758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.4 1.9e+02 3.1 1.6 1 19 387 405 387 409 0.85

2 7 0.0006 0.048 14.5 2.7 1 23 415 437 415 437 0.98

3 7 1.1e-05 0.00091 19.9 1.2 3 23 445 465 445 465 0.99

4 7 0.0039 0.31 11.9 7.8 1 23 471 493 471 493 0.98

5 7 1.9e-06 0.00015 22.4 0.8 2 23 500 521 499 521 0.97

6 7 6.9e-06 0.00055 20.6 1.6 2 23 528 549 527 549 0.96

7 7 7.7e-06 0.00061 20.5 0.1 1 23 555 577 555 577 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.4	1.9e+02	3.1	1.6	1	19	387	405	387	409	0.85
2	7	0.0006	0.048	14.5	2.7	1	23	415	437	415	437	0.98
3	7	1.1e-05	0.00091	19.9	1.2	3	23	445	465	445	465	0.99
4	7	0.0039	0.31	11.9	7.8	1	23	471	493	471	493	0.98
5	7	1.9e-06	0.00015	22.4	0.8	2	23	500	521	499	521	0.97
6	7	6.9e-06	0.00055	20.6	1.6	2	23	528	549	527	549	0.96
7	7	7.7e-06	0.00061	20.5	0.1	1	23	555	577	555	577	0.98

Sequence Information

Coding Sequence: ATGCCGCCTCACTATGAACGTTGTGGTGACATTGTCTGGCAGTGCAAGCGGGAGGCTCGCAGTTTTGCCTTTAAGTGCCTCTTCTGTGCGCATCAATCAACGGCCTTTAGGGATTTTAGGGTGCATTTGGAAAGTGAGCATGCGGGGCAGATGGGACTCGATCTGCAAGAAGAGCctataataagaaaaacactGCGTAGCCAGCAAGAGACACAAACGGCATTAATAATCACTGACCAGTTGGAAACAGAGACAACTGCAAAACTTTCTATGACGGAGCTCCAAGAAGATCCGTTGGAGAAGAGCGAAGTTTCGTTCGCGGCAGTCAAGCAGGATTTTGAATCCGAGCCAGAATCGGAACCCATGCTTGATATGCCAAGCAACAGCAGTAGCGACAGCGACACATTGATGGACAGCGCTGCCGAGAACTTGGAGACTGCGCCCATCGATTCATCATACTTTTGGCTGCGCCAGCATCCCATAATGCTCTGCCTCATTGAGCAATTCAAGGAGACTCGGCTTCTCTGGGACATGGGCATGCTGGAGTATCGCAACTACAAACGACGCGGCGACGCCTGTGACCAGATCGCACGTCATTTGAACGCACAGTTCGGTCTGCAGTTCAAGGGTCAGCAAATTACCGACTACACGAAAAGCCTACGTTCCGCCTACGCAGAAGAACAGCGACGTCTGGAGCGAAATGAGGATGCAGCACCAGCTAAATGGTACTATGAACAGCTAAGCTTTCTGGACAAAAATGTGCGGCGGAAACGATGCACCCGGTTGGCGCAGAAGGGCAGTCACAAAAGCGTTGGTGTTTTGGATGCAATGTTGCCCGTGCCGCAGCTGACGGACGAGCAGAATTTAAAGTTCATAGAACTCTATAAAAGCTGTAATCGTCTTTGGGATATGCAGGATTTGACCTGTCGCCTGCGTCACGTGCGTGTGGAAGCCAAGAAGAGGCTGCTGCAACTGTGCCACAGCGAATTGCAAGTGCCGCTGGAGCCGGCTCAGCTACAGCGCTACATTAAGCATATGCGCAAAGCCTACGCACAGGAGAAGTCGCGTCGCTTTGACTGCAAGCGGAAGGGACTCGTATATACGGCACGAGGCCGCTTTCAGCAGCAACTACAGTTTCTCGACGAGCACATGCCGCCTTTTCAGTGCAAAGAATGCAACGAGTTGCTCAGCAGCATGGATCGCTTCAAGGTGCATTGCGCCGAGCATGACGGCAGTTTGCCCTTTGTCTGCCCATTCTGTAAGCGAGGCTTTACGCGCAGCGACAATTGCATTATGCATGTGAGGCGGCACACCCAAGACTTTCATCTGGGCTGCAAGGAGTGCGGCAAGCGATTTGCCAACACCACGGATCTGCAGGTGCATCGGCGCCAACACACGGGTGAGAAACCCTATTGCTGCGACGTGTGCGGCAGTCGCTTCAGCACCTGCTCCTTCTTCGAACGCCACAAGCGACGGCACGAGCAGCGGCCCACTGGCAAGTGCCATATATGCGACAAGGTATTCTATGAGAATTCATTGCTCAACGATCACATGAAGGCCCATCTGAATGTGAGAGACAAAAAGTGTGATATCTGTAACAAATCCTTCACAAGCGCCAAGTATCTGCGCCAGCACAAGGAGATCCATGCAACCCACAAACGCTACATCTGTAAGATCTGCGGCAAGGGATTCGCCCAATACGCCGGACTCAGCGGTCACATGAAGTCGCATGGCACGACAGTGCGCGGTGTTACCAAGGAGGAAACCACCGCGATATCATCACCAACAGATCCGCCAGCTACTGCATGA
Protein Sequence: MPPHYERCGDIVWQCKREARSFAFKCLFCAHQSTAFRDFRVHLESEHAGQMGLDLQEEPIIRKTLRSQQETQTALIITDQLETETTAKLSMTELQEDPLEKSEVSFAAVKQDFESEPESEPMLDMPSNSSSDSDTLMDSAAENLETAPIDSSYFWLRQHPIMLCLIEQFKETRLLWDMGMLEYRNYKRRGDACDQIARHLNAQFGLQFKGQQITDYTKSLRSAYAEEQRRLERNEDAAPAKWYYEQLSFLDKNVRRKRCTRLAQKGSHKSVGVLDAMLPVPQLTDEQNLKFIELYKSCNRLWDMQDLTCRLRHVRVEAKKRLLQLCHSELQVPLEPAQLQRYIKHMRKAYAQEKSRRFDCKRKGLVYTARGRFQQQLQFLDEHMPPFQCKECNELLSSMDRFKVHCAEHDGSLPFVCPFCKRGFTRSDNCIMHVRRHTQDFHLGCKECGKRFANTTDLQVHRRQHTGEKPYCCDVCGSRFSTCSFFERHKRRHEQRPTGKCHICDKVFYENSLLNDHMKAHLNVRDKKCDICNKSFTSAKYLRQHKEIHATHKRYICKICGKGFAQYAGLSGHMKSHGTTVRGVTKEETTAISSPTDPPATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00523200;
90% Identity: iTF_00602103;
80% Identity: -