Dqui010691.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- -
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000415.1:8852368-8864889[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 4.9e-06 0.00039 21.1 5.9 1 23 264 286 264 286 0.98 2 18 0.0012 0.097 13.5 3.5 1 23 292 315 292 315 0.96 3 18 0.056 4.4 8.3 5.6 1 23 321 343 321 343 0.98 4 18 0.00013 0.01 16.6 1.2 1 23 356 378 356 378 0.95 5 18 3.1e-06 0.00025 21.7 1.5 1 23 678 700 678 700 0.97 6 18 0.0018 0.15 13.0 0.3 1 23 706 729 706 729 0.98 7 18 0.012 0.93 10.4 0.9 1 23 735 758 735 758 0.86 8 18 0.015 1.2 10.1 8.0 1 23 785 807 785 807 0.96 9 18 0.0023 0.18 12.7 0.5 1 23 813 835 813 835 0.98 10 18 0.00065 0.052 14.4 0.5 1 23 841 863 841 863 0.98 11 18 0.0022 0.17 12.7 2.8 1 22 869 890 869 893 0.91 12 18 3.1e-06 0.00025 21.7 1.5 1 23 1165 1187 1165 1187 0.97 13 18 0.00082 0.065 14.1 0.2 1 23 1193 1216 1193 1216 0.98 14 18 0.012 0.93 10.4 0.9 1 23 1222 1245 1222 1245 0.86 15 18 0.021 1.7 9.6 7.5 1 23 1280 1302 1280 1302 0.95 16 18 0.0059 0.47 11.4 3.3 1 23 1308 1330 1308 1330 0.96 17 18 3.3e-05 0.0026 18.5 0.5 1 23 1336 1358 1336 1358 0.98 18 18 0.0022 0.17 12.7 2.8 1 22 1364 1385 1364 1388 0.91
Sequence Information
- Coding Sequence
- ATGTCACAATTAGTTATCTGCAGGACTTGTGGTAAGAAGATATACAACTGGAATGCCAAGAGCCTCTTCGATACGGAAGACAATGAAATTTTAGCGAAGATCCAAATATTGACGGGAATCTATatTGATGAGGAGCAGCATATGCCCAAGGACATTTGTAGCAGTTGTCATTTGGATTTAAATCACTCAATAGCCTTTCGGGAGCGATGTATTAAAACGCATAAACTTCTGTTGATGTTGAATGAGAGGCGTAGGAAGCGAACGCCTTTAGACGCACTCAAGACCACGAAAATCAGATCTAAAAAGCATCCTCAACTTGAGATTGTGAGGGTTTCTATCGAGCCGCATCATCCCCTAATCGAACAGAAAGCTAAGCAAATTCGCTCGCATTCCAAGAGTCGTAAACGTAAAACGACACTATGTGAAGAACTTCCAATCATTGATCAGCAACCCAATTCATTCTGTAAAGAAGAGGCGCAACAGGACGAATGTCCCAATTTTGACCATTCTGTACATTCAGATAACGAGAATGATAACGATAAGCAGCCCAATACATTCTGTAAAGAAGAATCACAACTGGAAGAATGTCCCAATTTTGAGCATTCTGTACAATCAGATAATGATGAGTTTGGAAATCTAATAGAATCTCAGGCATTCTGTGAAGAAGCATCGCAGGACGAAAGTCACAGTGTGGAGCACACTGCACATTCGAATAACGAAATTCCCGATAAGCCCAAAAAGAAACCAGACCGTCGAGGTAGCCAAACCGTCGCGACGGGAGCCAAGAAATATGTGTGTCACCATTGCGGCAGATGCTTTGCAGACTCCAGCAACTTTAAAGTTCATGTTTTGCGGCACACGGGTGTCAAGGATTTTGATTGCACCGAATGTGGCGCAAAGTTCTTTACCCGCCATCTACTGCATTTGCATATTCGTGTGCGGCACCTGGGTGAAAAACCGTACGCATGTAAATATTGTGACCAGCGTTATTTCACGAGCACCTCCCGCTGTCGGCATGAACGGAGTCATGTGGAATACCTGGCGCCACAGGTTGAAATACCATCGTTTACGTGTAACTTGTGCAACAAATCCTTTACCAAGAAAACTTCTTTGGACAACCATGCCGTCGTGCACACCGGGGAACAACCATTCTGCCTACAGAAAAATCCGGATATTGAGAAAGGATGCAAAGCGAATGAAAATGGCAAGAAGCACTCTAAAGAGAAGGACATCCAAGGcggatttcaatttcaaatgggACTTCCAGAAGTGCGGGAGGCAGCTGTTCCAGATTTTGTTAGCTCCACGGGAAATTCCTTTGTTCCGTTCATCTCCGCGCCTTCAGAGAATGATCCCTTGGCTGTGGAACAGGTGAAGGCAGAGAATGAAACCGATGTTTCTTTGGCCAATAAGATGAAATGTCGCACTTGCTCTCGCcactttgttgttgatgaCAACGCAAAGGATCTAAGCGACGTGGAAAACGCTGTGATGTTATACCACATTGAATTTATTACCGGAATTTGGATCCAATGCAACGATAAAATTTCTCAATTCATGTGCCCCCCTTGTGTTGACAACTTAAGCACAGCCATTGAGTTCCGAGAAACATGCATACGGACAGAACTTCTGCTCACAGGAGGCGACGATGTCGATCTTTCAGAGATCGGAATAGAGTTGTGCGATAATGATACGGTGGAACCGCAGACGACTGACGATATAAAAGAGGAGGAATTCACCGAAGAAGCAACTGTAATTGAGCCGTCAACACGAGCAGTATCTAAAGAAACATCTGTTGCGGATTCAAGTAGCCTTGCTTTGGGTGCCCAGATCTATAAAGAGCTTTTGAGTGAATATCAGGCAAAGGAGAAggctgcaaaaacaaaacaaaaggaagCAACAATCCCAGACACCCAGTcgacaaagaaaaagaaacaagtgCCACGGGAGCCAGAGGTCAAACGTACCAAACGCACGAGAGAGGAAAAAAATCGGATACGCCGTGAACAGAATAAAGCCTTGCCCCGCAATCATGTGTGCGATCAGTGTGGTGCATCCTTTCGATTTAGAAGCAATCTCACAATACATATGCTGCGGCACACGCGCTCCAAGAACTATTCATGTCCAGAATGCTCCGAGCAGTTCTATGATGCTTATATGAGAAACATGCACATCCGTGTGCGTCACCGAGGCGAACTTCCCTTTGTCTGCAAATATTGTCCGAAAGCATTTAAAGCTTCTAGCTTACGTTATCTGCACGAGAAAAACGATCATGGAGCATCTCCGCGCATTCACAGgaatgtaaacaaattcaacCAAAGAATAGGAGTTAAGAAAAGTCAGACGCAGCGTCACTGTTGTAGTCATTGCGATCAAAGCTATGTCACAAAATGCGCCCTCAACTGGCATATAAATCAACATTTAGGCCTGACTCCTTATAAGTGCAAGGCCTGCGATATGAGTTTTCCGAATCCTCAAGCGAAACAACGTCACGAGATGAGGCACGATAGTAAGCGTCCATTTGAATGTGACATTTGCCTCAAAGGATTCTACACACGGATTAAGCTTAAAGAACATGAACGGATTCACACTGGCGAACGTCCTTACAGGTGTGACATTTGCGATACCTTCTTCCGATACGATTTCAACTTGAAATCGCATCAGTTTAGCAAAATGCATAAGGATAATCTGCTAAAGGCACAAAAGGAGATGATTGTCGAAGACTCAAAAGTGCGGGAGGCAGCTGTTCCAGATTTTGTTAGCTCCACGGGAAATTCCTTTGTTCCGTTCATATCCGCGCCTTCAGAGAATGATCCCTTGGCTGTGGAACAGGTGAAGGCAGAGAATGAAACAGATGTTTCTTTGTCCAATAAGATGAAATGTCGCACTTGCTCTCGCcactttgttgttgatgaCAGCGCAAAGGATCTAAGCGACGTGGAAAACGCTGTGATGTTATACCACATTGAATTTATTACCGGAATTTGGATCCAATGCAACGATgaaatttctcaatttatGTGCCCCAATTGTGTTGACAACTTAAGCACAGCCATTGAGTTCCGAGAAACATGCATACGGACAGAACTTCTGCTCACAGGAGGCGACGATGTCGATCTTTCAGAGAACGGAATTGAGTTGTGCGATAATGATACGGTGGAACCGCAGACGACTGACGATATAAAAGAGGAGGAATTCACCGAAGAAGCAACTGTAATTGAACCGTCAACACGAGTAGTATCTAAAGAAACGTCTGTTGCGGATTCAAGTAGCCTTGCTTTGGGTGCCCAGATCTATAATGAGCTTTTGAGTGAATATCAGGCAAAGGAGAAGgctgaaaaaacaaaacaaaaggaagCAACAATCCCAGACACCCAGTcgacaaagaaaaagaaacaagtgCCACGGGAGCCAGCGGTCAAACGTACTAAACAAACGAGAGAGGAGAAAAATCGGATACGCCGTGAACAGAATAAAGCCTTGCCCCGCAATCATGTGTGCGATCAGTGCGGTGCATCCTTTCGATTTAGAAGCAATCTCACAATACATATGCTGCGGCACACGCGCTCCAAGAACTATTCATGTCCGGAATGCCCCGAGCAGTTCTATGATGCTTATATGAGAAACATGCACATCCGTGTGCGTCACCGAGGCGAACTTCCCTTTGTCTGCAAATATTGTCCGAAAGCATTTAAAGCTTCTAGCTTACGTTATCTGCACGAGAAAAACGATCATGGAGCATCTCCGCGCGTTCACAGgaatgtaaacaaattcaaaaggGTAGCACTCAAGGAAAGTCAGACGCAGCCAGAGCCAATGTTAGATGAATATGGTCGTCACTGTTGTAGTTATTGCGATAAAAGCTATGTGTCAAAATCCGCGCTCAAGTGCCATATAAACCAACATTTAGGCCTTACTCCTTACAAGTGCAAGGTCTGCGATATGACATTTTCGAATAATTTAGCGAAACACCGACACGAGATGAAGCACAATAGTAAGCGTCCCTTTGAATGTGACATTTGCCTCAAAGGATTCTACACACGggttaatcttaaaaatcatGAACGGATTCATACTGGCGAACGTCCTTACAGGTGTGATATTTGCGATACCTTCTTCCGATACGATTTCAACTTGAAATCGCATCAGTTTAGCAAAATGCATAAGGATAATCTGCTAAAGGCACAAAAGGAGATGATTGTCGAAGACTCAAGTTCGTCGTCAGAATGA
- Protein Sequence
- MSQLVICRTCGKKIYNWNAKSLFDTEDNEILAKIQILTGIYIDEEQHMPKDICSSCHLDLNHSIAFRERCIKTHKLLLMLNERRRKRTPLDALKTTKIRSKKHPQLEIVRVSIEPHHPLIEQKAKQIRSHSKSRKRKTTLCEELPIIDQQPNSFCKEEAQQDECPNFDHSVHSDNENDNDKQPNTFCKEESQLEECPNFEHSVQSDNDEFGNLIESQAFCEEASQDESHSVEHTAHSNNEIPDKPKKKPDRRGSQTVATGAKKYVCHHCGRCFADSSNFKVHVLRHTGVKDFDCTECGAKFFTRHLLHLHIRVRHLGEKPYACKYCDQRYFTSTSRCRHERSHVEYLAPQVEIPSFTCNLCNKSFTKKTSLDNHAVVHTGEQPFCLQKNPDIEKGCKANENGKKHSKEKDIQGGFQFQMGLPEVREAAVPDFVSSTGNSFVPFISAPSENDPLAVEQVKAENETDVSLANKMKCRTCSRHFVVDDNAKDLSDVENAVMLYHIEFITGIWIQCNDKISQFMCPPCVDNLSTAIEFRETCIRTELLLTGGDDVDLSEIGIELCDNDTVEPQTTDDIKEEEFTEEATVIEPSTRAVSKETSVADSSSLALGAQIYKELLSEYQAKEKAAKTKQKEATIPDTQSTKKKKQVPREPEVKRTKRTREEKNRIRREQNKALPRNHVCDQCGASFRFRSNLTIHMLRHTRSKNYSCPECSEQFYDAYMRNMHIRVRHRGELPFVCKYCPKAFKASSLRYLHEKNDHGASPRIHRNVNKFNQRIGVKKSQTQRHCCSHCDQSYVTKCALNWHINQHLGLTPYKCKACDMSFPNPQAKQRHEMRHDSKRPFECDICLKGFYTRIKLKEHERIHTGERPYRCDICDTFFRYDFNLKSHQFSKMHKDNLLKAQKEMIVEDSKVREAAVPDFVSSTGNSFVPFISAPSENDPLAVEQVKAENETDVSLSNKMKCRTCSRHFVVDDSAKDLSDVENAVMLYHIEFITGIWIQCNDEISQFMCPNCVDNLSTAIEFRETCIRTELLLTGGDDVDLSENGIELCDNDTVEPQTTDDIKEEEFTEEATVIEPSTRVVSKETSVADSSSLALGAQIYNELLSEYQAKEKAEKTKQKEATIPDTQSTKKKKQVPREPAVKRTKQTREEKNRIRREQNKALPRNHVCDQCGASFRFRSNLTIHMLRHTRSKNYSCPECPEQFYDAYMRNMHIRVRHRGELPFVCKYCPKAFKASSLRYLHEKNDHGASPRVHRNVNKFKRVALKESQTQPEPMLDEYGRHCCSYCDKSYVSKSALKCHINQHLGLTPYKCKVCDMTFSNNLAKHRHEMKHNSKRPFECDICLKGFYTRVNLKNHERIHTGERPYRCDICDTFFRYDFNLKSHQFSKMHKDNLLKAQKEMIVEDSSSSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -