Basic Information

Gene Symbol
Camta1
Assembly
GCA_035047525.1
Location
JAWNPO010000554.1:1325609-1361391[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1 2.3e+04 -9.3 8.7 22 91 155 222 147 235 0.46
2 3 5.6e-49 1.3e-44 151.0 2.1 2 116 283 395 282 395 0.98
3 3 0.11 2.5e+03 -1.4 4.8 24 98 571 645 557 655 0.71

Sequence Information

Coding Sequence
ATGGCCGGTTATCGTGCCCTGCCCTTGGCGCCCGTCTCGGCCAGCAGCATGGCCACAACGGCGACGGCCGTGCAGCCGGGCAGCGGAGGACATTCCGTTGCCGTTCCTGGGCCCGCAATGGCCTAtgcccatcatcatcatcatcatcagtcgATGACGGCGATGTCGAATAATGGTATTATCTATCAGTCGGCGGTGCACGCCTCAATACACAGTTTGAATACAGTACAAAGTCAGCATCGTTCATCGTCAACAACGCATCATCATATTTTAGCCACGGCAACAGCGACGGCAACGGcgacggcagcggcagcagcagcaacagcagcagcggccaCGGCAGCTGCagccgttgcagttgcaattcccacaccagcagcagcagcagcaattcaGCCGACGGATGGACGGACAGCAGCAACTTATGGCCAACCGCAACAACatatgcaacagcaacagttgcaatctacacatcaacagcagcagcagcaacaacagcagcagcagcaccaacagtTGATGctgcatcagcagcaacagcaacatcaacagcaattgCTGCCACAtgtacagcagcaacatcacctgacacatcagcaacaacaacagcagcaactccagcagcaacaacaattgcaccaccaccaccaccatcatCACCACCACCAACAGTTGTCGCTGCATCAGAACCACCTGTATTTCAATGGCCTgggccatcatcatcatcaccatcgtCAGATCTTTAGTCACCTGCAGAGCGCCCTCTTGCCGCTCAGTGTCAACGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAGCGCCATCGTTGGAATACAAATGAGGAAATCGCGGCGATTCTTATCAGCTTTGATAAGCACAGCGACTGGCAATCAAAGGAAGTCAAAACAAGACCCAAGAGCGGTTCCTTGCTGCTTTATTCGCGAAAGAAGGTGCGATACAGACGTGATGGTTACTGCTGGAAAAAGCGCAAGGATGGGAAGACAACACGCGAGGATCACATGAAATTGAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTTTTACAGAATCCGGATATTGTTTTGGTGCATTATCTGAATGTGCCATATCCGGATGATAATAAAATGGCCGTCATTGCGCCCAGCATCACACTTTGGGGCGACAAAAAGGAATGGACCAAGGAGGAGCTGGTCAGCCAACTGAAGCCCATGTTATCCACAGTGAATTCGGATGAAGACTCAGACTCGGGCAACGATATAGAAATTTCGACTGCTGAGACAGTGGAGTCGATTGTCTGTCAGCTGATGGAGAAGCAGCGTCTGTCGCGTCAGGCGGCGTTGGTGAAGCAACTCGATTGCGGTTGTGGGGATGCAACTTGTGCCGATGGCAAGACTTGCACACACCCTGTAATGCGGCGCACGGGCATATTGAAGTCGGTGTCGGAAAAGCGGGGGGCAAATGATGCCTACAGCGGACAGAATGGCACGCCCAATGTTGTCGTGGCCAGCAAGCTTTATTCGCGTTGGTCGGAGCGTCACAGGCAGCGGGAGGCGGCATTGCATTTGGATAATCCGCACTCGCAGTTCCACAACGCCACGCAACAGTTGCCACAAGAGTCGGCGATCAAATTCCAAATCAttccgcagcagcagcagcaacagcagcagcaacatcaacaacagcaacaacagcaacatcaacaacaacaggcagaTGGCAGCAACTATCAGCAGCAATATCGTGGTGCCAATCAAATGTTGGCCACAAGAAGCAATCTGATaatacaacagcagcagcaacatcagcaatatcagcaacagcagcagcaacacttgAACTTGCAACGCTTTGTGGCCAGTCACAATCAGAGCAATCAAacaactgaagctgcagcagcagcagcagcaacaacaacagcaacagccaacaATATTCAACCCCCAGTTGAAGCCATGTGCATGTCACCAGAGCATCAACTGAGCAGCgggggcagcaacaacaacagcagcaataacaatcttttaagagcagcaacaacaacgtcttCCGCTGGCAACACTCCTTCCACGTCGGCAACAACATCCACCTCCAGTTCCTTACAGTCGATTATCGATAGCAATCATCAGCAACAAATTTCAACGAcaccagtaacaacaacaacagcaacatctgcagcagcagcagcagcaacagcagcaaattgTGATAATTTAATGAGCGCCAATGTGCTCGCTGAGCTGGAGTTGGgcgagcaacagcaacaacaacaacagcagcagacaGCAAGGAGTTACAGCAGCaataatagcaatagcaacagcaacaacaacaacagcagcagccacaacaacaacaacaacagcagcgttAACAATCAGGCCAATCAGGCCAACGTACATAACGGTTGTGCAAACTACAGTGCTTCCAGTGATAACAGCAGCCAAATTAGCGCCAGCGATGACAGCAACTTTGGcgccaccagcaacaacaacaatcagaacaacagcaacaacaacaacaacaacaacaacaacgatgagGAGCCACAAACGGAAACATTGAGTTTCTTTAATGAAACATTGGATTTGTCACATGAAGATATACAACGTACACTAATTGCTAATATGCcgtacaacaacagctgcaacaatacaacgacagtagcagcagcagcaccaaccacagcagcaacatcagcaacaacagcaactgagcaacaacaacaacaacaggcaatTAATGTAGAGTCTCCACAGGCTGAAGATGAAGACACTGCCGATGTCTTTGCCAATTTGGATGCCTTTGATATGTTGGTCGAATTCCCAGAGCTCGATTTGGATGATAAGCAGGCATTGAACAACACAGCCTTGGtgcaggaacaacaacagcaacagcaacaacaacatttgccaTCCTCATATTTAGATTCAACTCATTCACAATCACAGCGAAAGTTGCTCAATATTTGTGACTTTAGTCCCGAATGGTCATACACTGAGGGCGGTGTTAAGGTCCTTGTGGCCGGTCCTTGGACAAGTGATGGCGGTTGTTATACGGTTCTATTTGATGCTCAGCCCGTTCCCACAATTCTGGTCCAAGAGGGCGTTCTCCGTTGTTATTGCCCCGCCCACGAGGCGGGTTTGGTCACATTGCAAGTGGCATGCGGCGGTTTCCTCGTCTCCAACTCGGCTATGTTTGAGTATAAACTCTCACTGCTCGCCGATGCGCCCTTCGATGCCAGCAGCTCCAACGATTGTCTCTACAAATTCACGCTGCTCAATCGTCTCTCCACCATCGATGAGAAACTGCAGCTGAAAGTGGAGAACGAGCTGGCGACCGATCAGACAGCGCTTTATCTGGAGCCCAATTTCGAGGACAAGCTCGTGGCCTACTGTCACCGGCTGATGAAGCACGCCTGGAACACGCCGAGCCCCGTCGCCGTCTCCACATGGAGTGTTGGGCTACGTGGAATGACATTGCTCCACTTGGCAGCTGCACTCGGATATGCCAAACTAGTGGGTGCCATGCTCAACTGGCGTGCCGAGAATCCACATATCATACTCGAGACGGAACTGGATGCCCTCAGCCAGGATGTCCATGGATTCACACCCTTGGCCTGGGCCTGTGTCCGGGGCCATTTGGAGTGCACGCTGTTGCTGTACAAATGGAATCACAATGCGCTGAAGATCAAGACGCAGGCACAGCAGACGCCTCTGGACCTGGCCAGCCTCAAGGGGCACAAACAGCTGTTGTCCCAGCTCTGTCGCTTGGAGAAGGAGCGTTGCCGCAAGCCACATCCACGCGGAGGCCTGGCCAATCTATCCATGAACCTGGCCATTGAGTCGACCTGCTCCGAGGAGCCCAGCTACAGTGTCTACGAGTTGGAATTGCAGCGCAGGCACGATGGCGTCTTTCTGCGTCCCGTTGCTTTGCACAGCAACCAAAGTCCGcccagtaacagcaacaactcaaGTCGCTACTCGAAGCGTTCCTCGATTGACAGTGGCATCAACATGGACGTGCGCAGCAAATCCGGCAAACCTTTAGCTCGACTTCATGGCAACTTTGATGGATATGATAATTATGCTTTGGGCGTGGATTCGCCATTGGATTCGCTGTCCGGAAATAACTGCTCTGGATTGTTGTCCCCACTGCGCAAAATGGACTTTGCTCTGtGCGAGGTATCCACAGGCGAGTCGAGTCCCATACAAGCAATCGATAGCAAAGATATCGATTGCATCGATGACAATTCGACGAGTGCAACCGATGTCATCACCATTAGCAATGAGCTCAACGATGCCGTCGTTGTAGGGGATTCGGATGCCAAAGTTCTGACACTGGCCGAGCACATAATTGCCGCGATGCCCGAGAGGATAAAGAATGAGGCCGATGAGATGATGGTCCTGGGCAGTCCTCTGACTGAACCGCTCACCTCGGAGTCATCGGCGTTGACAGATAGCTTCATGGATCCGCTGCTAGACTCGTTGCCGAATACGCACTTCGACAGTGACTTTAGCTTTGATTTCCATGATCACAGCTATCGCTATCACGACGTCAGCACTCCCTGTTCCAGTTTAAGCCCGGCTAGCTCCGGTCCGCTGCAATCTCCGGCCAGTTATTCCATACTGGGCACAGATCCCTCTGTCAGTTCACCAAGTCCGCCGCCATCGACGAAGCAGCTAACGGAATTCCTGCATGCCTCGAGTATATCGCAGTATCCCTTCGAGGCGGACTTCTCGAAACTCACGTTGACCGACACCGAGCAAAGGGAACTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTATAGATCCTACAAGGGACGCCAGAAGCTGGAGGAGCAGAACAAGGAGCGCACAGCTGCCATTGTCATACAGAACTATTATCGGAGGTACAAGCAGTACGCCTACTACAGGCAGATGACAAATGCCGCTCTGGTCATCCAACATGGCTATCGCTCGTATCGTCGCAATAAGCGCTTTAAGAAGTCGCAGCACTGTCCTGGACTGGCTCTGGGAACGGCCAGTGATCATGGCAGTGTCAATTCGCAGTGTCTGTCCAGCTTCTACGATCACTACAAGCAggatcaacagcagcagcagcagcagcagcagcagctgaacgAGCTGTGCTCACAGCCCAGCACGCCCAAGGAGACGAGTCCATCAGGTCCCTTGAAACGCACCTATTCGCAGTCTACACAGAATCAGGCTGCACGTAAAATTCAACAGTTCATGAGACAATCACGTATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTCAATTTGCCATAATGAAAATggCAATCAAAATCTGCTGGAACAGCTGCAACCCAAACAATGA
Protein Sequence
MAGYRALPLAPVSASSMATTATAVQPGSGGHSVAVPGPAMAYAHHHHHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSSTTHHHILATATATATATAAAAAATAAAATAAAAVAVAIPTPAAAAAIQPTDGRTAATYGQPQQHMQQQQLQSTHQQQQQQQQQQQHQQLMLHQQQQQHQQQLLPHVQQQHHLTHQQQQQQQLQQQQQLHHHHHHHHHHQQLSLHQNHLYFNGLGHHHHHHRQIFSHLQSALLPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSDWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDATCADGKTCTHPVMRRTGILKSVSEKRGANDAYSGQNGTPNVVVASKLYSRWSERHRQREAALHLDNPHSQFHNATQQLPQESAIKFQIIPQQQQQQQQQHQQQQQQQHQQQQADGSNYQQQYRGANQMLATRSNLIIQQQQQHQQYQQQQQQHLNLQRFVASHNQSNQTTEAAAAAAATTTATANNIQPPVEAMCMSPEHQLSSGGSNNNSSNNNLLRAATTTSSAGNTPSTSATTSTSSSLQSIIDSNHQQQISTTPVTTTTATSAAAAAATAANCDNLMSANVLAELELGEQQQQQQQQQTARSYSSNNSNSNSNNNNSSSHNNNNNSSVNNQANQANVHNGCANYSASSDNSSQISASDDSNFGATSNNNNQNNSNNNNNNNNNDEEPQTETLSFFNETLDLSHEDIQRTLIANMPYNNSCNNTTTVAAAAPTTAATSATTATEQQQQQQAINVESPQAEDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALVQEQQQQQQQQHLPSSYLDSTHSQSQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTILVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTALYLEPNFEDKLVAYCHRLMKHAWNTPSPVAVSTWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLASLKGHKQLLSQLCRLEKERCRKPHPRGGLANLSMNLAIESTCSEEPSYSVYELELQRRHDGVFLRPVALHSNQSPPSNSNNSSRYSKRSSIDSGINMDVRSKSGKPLARLHGNFDGYDNYALGVDSPLDSLSGNNCSGLLSPLRKMDFALCEVSTGESSPIQAIDSKDIDCIDDNSTSATDVITISNELNDAVVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHCPGLALGTASDHGSVNSQCLSSFYDHYKQDQQQQQQQQQQLNELCSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQFQGQQEMSICHNENGNQNLLEQLQPKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00601780;
90% Identity
iTF_00601780;
80% Identity
-