Dqui018536.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- -
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000510.1:1340421-1341893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-19 6.5e-16 58.1 0.0 2 45 180 224 179 224 0.97 2 2 5.6 1.1e+04 -3.4 0.1 3 11 258 266 257 269 0.81
Sequence Information
- Coding Sequence
- ATGCCCGCCTGCCAGTCCAACTTGATTGGGAACGGTGGCAACGGTGGCAATCAAAACAGCGGCGCGAATAACACTGCCGGCGTCGGCAACGCCGGCACCAACGatcaacggcaacagcagcagcaacaacacgatGCCCAGCAGCAAgcaacacagcagcagcagcacttgcaacagctgcactatcagcaacagcagcagcaacaacaacagggcGCCACAGCTGCCGGTCAAGCGTATTCCTCCCAAATTATAACCGTCAATAATCTTGTTGGCGGttatgcaacagcagcacagaACTTGTCACCCACGTCGCCCAACGAGTCGAACATGGTGCAGTCCGTTTACAGTCAGGGTCCGACGCCCACACAATCGCCAGTGCACTCGGGCGTGGGTGGAGGCGGTGGCGGAGGAGGCAGCAGCGCGGCAGGAAGTGCGGGCAGTGCTgctggcggtggtggtggcaaTAGCAGCagtggcggcggtggcggtggtaGTCAAGTGCCTAAACGGAAGCGATCAGTCAACCCGCAAGGTGATGAGAATTTCATACGTGCCCTGGAGGCGGTCCGTACCGGTGGCATTGGATTCTGCAAGGCTGCTCGTCTGTATGGAGTGAACAATCGCACACTTTGGCTGGAGTATAAGAAGCGGGGCTATCCGGTGTCGCGACCTAGCATTAAAGCGCGCGTGGTCAAGCAGGAACCAAATCTTTCCCCGTCACCAACACCATCCACAAATCCCGGCGATGATACAACCAACGAAACCTATGATCATCTAACCGCTGCCGTTGCCGCGGCCCAAACCGCCGCCCTCAACATGCAAATACCGCCACAGACGGAAACAACGACGCCGTCGCTGATGTGTACGCCTCACCACTCGGGCGCAACAGCGGCCAGCTCAGCCGGTGGTGGCGCGAATACGCATCCGATTGGTGTGATGAGCCTGTTTGATACACGCTATATGGATTCACCGACAATGTCCCGGCAGCGGTATATCGATGCGACGGGCGCCggcacagcagctgctgcttcgGGAACGGGGACGATCAATAATACGATTTCAAGTCACAtgggtgttgttgctgccgccgcGGCAGCTGGTGTAATGCCTCTACACCAGGTGGACCAGTTAAGCAGCGGAGGAGGTGGCAGCGGCACCGTTGAGCCTGGACACGGGCCGGGGCCAGCCACCCTATTGCAGGCAGCCGCTGTGATGGCTGCAACCGAGCCAGAACAAATGAGCATATCAGCCGTACCTGTTTCGGTCTCAACAATGGGTGCGGCGCACAGCACAGCGGCTACCGcctttctttttaataattttgtaactGTGGCGGCCCCACCGCCTCCCACATTGGTTGGCAGTACGCTTTCGCCGCTGGTTAACACTGGCCTGCAATACTTGGACAAATCCTAA
- Protein Sequence
- MPACQSNLIGNGGNGGNQNSGANNTAGVGNAGTNDQRQQQQQQHDAQQQATQQQQHLQQLHYQQQQQQQQQGATAAGQAYSSQIITVNNLVGGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGGGGGGGSSAAGSAGSAAGGGGGNSSSGGGGGGSQVPKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTNETYDHLTAAVAAAQTAALNMQIPPQTETTTPSLMCTPHHSGATAASSAGGGANTHPIGVMSLFDTRYMDSPTMSRQRYIDATGAGTAAAASGTGTINNTISSHMGVVAAAAAAGVMPLHQVDQLSSGGGGSGTVEPGHGPGPATLLQAAAVMAATEPEQMSISAVPVSVSTMGAAHSTAATAFLFNNFVTVAAPPPPTLVGSTLSPLVNTGLQYLDKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -