Basic Information

Gene Symbol
-
Assembly
GCA_035047525.1
Location
JAWNPO010000415.1:4701369-4702378[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.1 5.4e+03 -1.8 0.0 23 63 45 84 25 97 0.61
2 3 6e-12 1.5e-08 35.2 0.0 13 89 138 204 131 204 0.84
3 3 5.2 1.4e+04 -3.1 0.0 76 86 267 277 258 278 0.79

Sequence Information

Coding Sequence
atgaataattctCAAGAATATCTTCGGTGCAGCAGAAGGGGATGCAGTTATACAACCAATAGATCGTACAATCTGGAGCGCCACGAACGCAACCATGACAAAGGCAAGGTTCCAGTATCCCAGTGCCAACCATGTCCGCATTGCACATATGCCGCTGGATCAGTTCACAATTTAATGCGACATATTAGCAAAAAGCATGCAATAGTAACTGTAAAGAAGCAGAATTGCCAACTTATTTGCAGTCAACGGGAGCAGCCGCCGACTGAACAGTCaagaaataaagaagaaaGAGAGGAAACAGAAGGGCAAGGAGAAATTGCAGCGCAACAGTTGTGGACAATTGACGACGGACAAATTTTGAAGCCTTCGCTTTGGCTGTGGAACTCACCACAGCAACAGGAGAAGAACTTCTTAAGGCGCAGTGCTCTGAACGAAGAGTGTCAGATACTTGGCCGGACCGTCAAGATGTTCAAGTTGTACTCTTTGGTGCAAGCAAGAGGAGGAGCCCTTAATGTGGATGAATGGGACGATGTGGCGGCAAGCTTGGGCTTTGGTCCTGGATTAGGTCAAGATGTGCGTGCCAAGTACATGGATGTGCTTATTGAATATGAGAAAAATGAGGAAGAACGATTGCAGGATTGTGAAAATGCTGAAGAAGTTCCATCTTGGTGGGACGACGGTGATTATACCAATGATTACGAGAGCTGTAAGCCCGAGGATTCGCATTTGGGCAGCGAAAGTGGGTTAGATGAGGAAAGTCCGCCCATTGATGATGTTGAAAGCGGCATTGTTAATATGATTCTCAACAAGTATTATGCAAATTATCTCAATGACAGCAAAGCGTTCAGCAAACGGTTTCACGTAAAAGACTCGTGGCTTTGCGCCACAATGTTGAGCTATCCAGAGCTAATTTGCCAATTGCACCTTAAACATTATACTGATCCTTGA
Protein Sequence
MNNSQEYLRCSRRGCSYTTNRSYNLERHERNHDKGKVPVSQCQPCPHCTYAAGSVHNLMRHISKKHAIVTVKKQNCQLICSQREQPPTEQSRNKEEREETEGQGEIAAQQLWTIDDGQILKPSLWLWNSPQQQEKNFLRRSALNEECQILGRTVKMFKLYSLVQARGGALNVDEWDDVAASLGFGPGLGQDVRAKYMDVLIEYEKNEEERLQDCENAEEVPSWWDDGDYTNDYESCKPEDSHLGSESGLDEESPPIDDVESGIVNMILNKYYANYLNDSKAFSKRFHVKDSWLCATMLSYPELICQLHLKHYTDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00601550; iTF_00533585;
90% Identity
-
80% Identity
-