Basic Information

Insect: Drosophila quadrilineata
Gene Symbol: stc
Assembly: GCA_018150725.1
Location: JAECWN010000452.1:19686299-19690978[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.6e+04 -4.3 1.6 15 19 507 511 506 511 0.81

2 15 0.095 7.7e+02 0.1 0.4 4 10 540 546 539 546 0.96

3 15 6.6e-07 0.0053 16.6 15.1 1 19 552 569 552 569 0.93

4 15 1.6 1.3e+04 -3.8 1.1 6 10 595 599 594 599 0.89

5 15 2e-06 0.016 15.1 12.9 1 18 605 622 605 623 0.94

6 15 1.9 1.5e+04 -4.0 1.5 7 13 627 633 627 634 0.75

7 15 2 1.6e+04 -7.6 5.1 6 10 653 657 652 657 0.55

8 15 2.3e-09 1.8e-05 24.5 12.9 1 19 663 681 663 681 0.98

9 15 1.3 1e+04 -3.5 0.5 5 10 711 716 711 716 0.90

10 15 0.00073 5.9 6.9 18.7 4 18 729 743 722 744 0.86

11 15 0.035 2.9e+02 1.5 11.3 1 18 784 805 784 806 0.77

12 15 3.1e-10 2.5e-06 27.2 15.1 1 18 811 828 811 829 0.97

13 15 2 1.6e+04 -4.3 10.6 1 18 868 885 868 886 0.89

14 15 2.4e-08 0.00019 21.2 12.6 1 16 922 937 922 944 0.88

15 15 2.1e-07 0.0017 18.2 14.5 1 19 954 973 954 973 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.6e+04	-4.3	1.6	15	19	507	511	506	511	0.81
2	15	0.095	7.7e+02	0.1	0.4	4	10	540	546	539	546	0.96
3	15	6.6e-07	0.0053	16.6	15.1	1	19	552	569	552	569	0.93
4	15	1.6	1.3e+04	-3.8	1.1	6	10	595	599	594	599	0.89
5	15	2e-06	0.016	15.1	12.9	1	18	605	622	605	623	0.94
6	15	1.9	1.5e+04	-4.0	1.5	7	13	627	633	627	634	0.75
7	15	2	1.6e+04	-7.6	5.1	6	10	653	657	652	657	0.55
8	15	2.3e-09	1.8e-05	24.5	12.9	1	19	663	681	663	681	0.98
9	15	1.3	1e+04	-3.5	0.5	5	10	711	716	711	716	0.90
10	15	0.00073	5.9	6.9	18.7	4	18	729	743	722	744	0.86
11	15	0.035	2.9e+02	1.5	11.3	1	18	784	805	784	806	0.77
12	15	3.1e-10	2.5e-06	27.2	15.1	1	18	811	828	811	829	0.97
13	15	2	1.6e+04	-4.3	10.6	1	18	868	885	868	886	0.89
14	15	2.4e-08	0.00019	21.2	12.6	1	16	922	937	922	944	0.88
15	15	2.1e-07	0.0017	18.2	14.5	1	19	954	973	954	973	0.96

Sequence Information

Coding Sequence: ATGAGTGGGGAAAGTGAAGACATCGGCGAGCTCATCAAATTTATTGATCGCAATCCTCCGTATGGACCCTTCTATGGCATCATGGGCGTCTCGGCAGCGATGGTGTTTTCCTCATTTGGCGCTGCTTATGGCACTGCTGTCTCGGGCAGCAGCATTGCCGCCATGGCGGTCATGCGGCCAGAGCTCATCATGAAATCGATTATTCCCATTGTCATGGCTGGCATCATAGCCATCTATGGACTTGTTGTGGCCGTACTTATTGCTGGCACCCTGGACTCATCGGAGAGGTATTCCATTGTCAAGGGGTATGTGCATCTGGCAGCAGGCTTGTCTGTGGGCTTGTGTGGACTGGCGGCGGGATATGCCATTGGAGTTGTTGGTGATGTTGGAGTTCGCAATACGGCACTTCAGCCACGTCTATTTATTGGAATGATACTAATTCTGATTTTTGCTGAGTTCATCACACAACACAATTTGGGCGCAAGCAACAGGGCGTACAGCAATGGAGTCGGTGGTGGAGTTGGCGGTGCCTTCGGATTGCTGCCCGCCAACAGCAACAGCAGCAACAATCTAAACTCGAACAGTTCCAGCGGTGGAGGTTATAGTGGAGTAGGAGCGTTTTTTGGACAGCAGAATGGTGATGGTGTTGGCACTTCCATTTCCAATCATTATCAAGGATCAGCCGTATATCCGCCGCATCTGTATTCGCCCTTTGGCAACAACCCCTTCGCGACTGGCGGCTTTGACTTCAGCACGTCAAAGCTGCAGGCATCCGCGCCAGAATTCGTGCCTAGCTTTGCCAAGCTCAGTTTGAGTTTAGGAGCTGACGAAGCTCAAGCTTCTGCATCCGGAGCCTCCAACGGTAACAATAACAGCAACACTGCCATCCAGCTAAACAGTGACACAGCCAACGGGGCAGTAACCACAGATCATCCTCATCCACATCCTCATCATCCTCATCAACGAGGAGGAGGAGGAGGCATGGCCACAACAACGGAGCAGCTGCCAAGGCAGCCGAAGCCACATGGCAGCAACGGTCGCCAGCAACGTCGCAACGATCATCGTGAGGATCGCAGCGAACGCAACGAGGATCGCTATGATCGCAAGAAGCCACAGAAGCAACAGCGCTATGACAATCATCGGAGCAACAAGCGGCGCGACGACTGGAATCGCAATCGGGATAGAATCAATGGGTACTCGCGTGCAGCCGAGGAGCTCGATACGAGCAACAGCAACGACAGCGCACATCCCTCGCCGGAGAAGCAACAACAACAACATCATCATCACCATTATCAACAGGGCCAATTCTCGCCGAGACGTGCCGCCGACAATGAGAAGCTCTCCCAGCGCGAGAAGCTCATGTGCGACATCGAACAGAAGCTATTGGAGTGCCTGGTGTGCGTGGAGCCGATAAAGGCACACAACAGCACCTGGTCGTGCCAGAACTGTTACCTGGTGCTGCATCTCAAGTGTGTCATCACATGGGCCAGCAGCTCCAACACGGACGAGGGCTGGCGCTGCCCCGCCTGCCAGAATGTGCTGCAGGTGCTGCCACGCGACTACCTCTGCTTCTGTGGCAAGCTGAAGAATCCTCCACTGACGCGCACCGAGCTGCCCCACAGCTGTGGAGAGGTCTGCCTGCGTGTCGAGGGCTGCAGTCATGCCTGCACGTTGCTCTGCCATCCAGGGCCATGTCCGCCTTGCCAGGCGAATGTCAATCGCAGCTGCGGCTGTGGACGCACCAACAAGCTGATGCAGTGCTCCATGAAGCAGCCGCTGCAATGTGAGTCCATCTGTGACAAAGCACTGAACTGCAATGAGCATCGCTGCCAGCAGCAGTGCCATGCGGGCAAGTGTGCGCCATGCGCGGACCAAGTGCAGCAGAACTGTCACTGTGGCAAGCAGCAGCGTGAGGTGCTGTGCACGCGGGAGAGCCAGGATAAGCGCAACTACTCGTGCCAGGAGTGCTGTGGCAAGCCGCTGCCGTGTGGCAATCACAAGTGCAAGGACTCGTGTCATGCGGGCGCCTGTCGTCCCTGCAAGCTCAGCCCCACACAGATCACCAGCTGCCCCTGCGGCAAGCTGCCCGTGGCGCCGGAGCAACGCACCAACTGTCTGGATCCGGTGCCCACCTGTGAGGGCGTTTGTGGCAAGACGCTGCGCTGTGGCAAACCCGCGCATCCGCATCAGTGCACCCACAAGTGCCACCTAGGGCAGTGTCCGCCGTGCAACAAGCAGACCGCGGTCAAGTGCCGTTGCGGTCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCAACGCGGGCGGACGATGCGCGTTGCAAGCGACGCTGCGTGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAATGCTGCATTGATATCGATCACGACTGCCCGCTGCCTTGCAACCGCACCCTGACCTGCGGTCGCCACAAATGCGATCAGCCCTGTCATCGCGGCAACTGCCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGTGCCGAGGTCATCTATCCACCTGTGCCTTGTGGCACCAAGAAGCCCATCTGTAATCGGCCATGCTCGCGCACCCACAGCTGCGGTCATGAACCGCAGCACAACTGCCACTCGGCTGCCGCTTGTCCACCCTGTATGCTCTTCACCACCAAATGGTGTCATGGCAAGCACGAACAGCGCAAGACCATTCCCTGCTCCCAGGCCAGTTTCAGTTGCGGTCTGGCCTGCGGCAAACCTTTGGCCTGCGGTCGCCACAAGTGCATCAAGCCCTGTCATGAGGGGGACTGCCAACAGGCTGGTGAACAGTGCCGCCAAAGTTGCATCAAGCCGCGCATTATCTGTGGTCACAAATGCGCGGCGCCCTGCCACGATGGAGATTGCCCGGAGACACCGTGCAAGGAACTGGTCGAGGTGCAGTGCGAGTGTGGCAATCGGAAGCAGAACCGCAGTTGCCAGGAGTTGGCTCGAGAGCATAGTCGCATTGCCACCGCTCAACTGGCATCGTCAATGGCCGAGATGTCCCGTGGTAACTACATGGAACTCAGCGAGATTCTGGCCCCCACCAAATCTGTCAAGTCAAACAAGATGTTGGATTGCAATGACGAGTGTCGCGTGCTGGAGCGCAATCGTCGCCTGGCCATTGGATTGCAGACGCGTCCCACGGAATCGGCCCTGAAGCCACTCACCAAGTACTCGGAGTTCGTGCGCAGCTTTGCCAAGCGTAATCCCGCTCTGACCAAGAGCGTCTATGACACCTTGGCTGATTTGGTGAAGCTGGCGAAGGAGAGCAAACAAAAGTCAAGAAGTCACTCGTTTCCCACAATGAATCGCGAAAAGCGTCAATTGGTCCACGAGCTGTGCGAGGCGTTTGCCATTGAGTCCGTTTCCTACGACAAGGAACCTAACCGCAATGTGGTTGCCACCGCTCACAAAGATCGCTGCTGGTTGCCTGCTGCCAGCATCATGGAAGTACTTGCCCGTGAGTCTGGACAACGACGCATCCCTGTGCCGAGCAACAACGCCTGGGGTCTGAAGAAATAA
Protein Sequence: MSGESEDIGELIKFIDRNPPYGPFYGIMGVSAAMVFSSFGAAYGTAVSGSSIAAMAVMRPELIMKSIIPIVMAGIIAIYGLVVAVLIAGTLDSSERYSIVKGYVHLAAGLSVGLCGLAAGYAIGVVGDVGVRNTALQPRLFIGMILILIFAEFITQHNLGASNRAYSNGVGGGVGGAFGLLPANSNSSNNLNSNSSSGGGYSGVGAFFGQQNGDGVGTSISNHYQGSAVYPPHLYSPFGNNPFATGGFDFSTSKLQASAPEFVPSFAKLSLSLGADEAQASASGASNGNNNSNTAIQLNSDTANGAVTTDHPHPHPHHPHQRGGGGGMATTTEQLPRQPKPHGSNGRQQRRNDHREDRSERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRAAEELDTSNSNDSAHPSPEKQQQQHHHHHYQQGQFSPRRAADNEKLSQREKLMCDIEQKLLECLVCVEPIKAHNSTWSCQNCYLVLHLKCVITWASSSNTDEGWRCPACQNVLQVLPRDYLCFCGKLKNPPLTRTELPHSCGEVCLRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTNKLMQCSMKQPLQCESICDKALNCNEHRCQQQCHAGKCAPCADQVQQNCHCGKQQREVLCTRESQDKRNYSCQECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVAPEQRTNCLDPVPTCEGVCGKTLRCGKPAHPHQCTHKCHLGQCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCVKKRSCGKHKCNAECCIDIDHDCPLPCNRTLTCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICNRPCSRTHSCGHEPQHNCHSAAACPPCMLFTTKWCHGKHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGDCQQAGEQCRQSCIKPRIICGHKCAAPCHDGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKSVKSNKMLDCNDECRVLERNRRLAIGLQTRPTESALKPLTKYSEFVRSFAKRNPALTKSVYDTLADLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEAFAIESVSYDKEPNRNVVATAHKDRCWLPAASIMEVLARESGQRRIPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -