Dqud009579.1
Basic Information
- Insect
- Drosophila quadrilineata
- Gene Symbol
- hang
- Assembly
- GCA_018150725.1
- Location
- JAECWN010000432.1:4929377-4938249[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.24 14 6.3 1.0 3 23 366 387 365 387 0.93 2 15 0.3 18 5.9 3.2 3 22 494 513 492 513 0.89 3 15 0.00051 0.03 14.7 3.3 1 22 620 641 620 643 0.90 4 15 0.028 1.7 9.2 0.1 2 21 655 674 654 675 0.93 5 15 0.00059 0.034 14.5 0.2 2 23 805 827 804 827 0.95 6 15 0.0017 0.099 13.0 0.1 1 23 835 858 835 858 0.96 7 15 1.4e-05 0.0008 19.6 0.1 2 23 944 965 943 965 0.97 8 15 0.00024 0.014 15.7 2.9 2 23 1072 1094 1071 1094 0.97 9 15 0.019 1.1 9.7 0.2 2 23 1103 1125 1102 1125 0.95 10 15 8.9e-05 0.0052 17.0 0.4 1 23 1138 1161 1138 1161 0.98 11 15 0.00011 0.0062 16.8 1.1 1 23 1230 1252 1230 1252 0.99 12 15 0.0016 0.096 13.1 0.9 1 23 1260 1283 1260 1283 0.96 13 15 0.31 18 5.9 0.4 2 19 1291 1308 1291 1309 0.93 14 15 1.4e-05 0.00084 19.5 0.4 3 23 1380 1400 1379 1400 0.98 15 15 0.0043 0.25 11.7 0.1 1 23 1435 1457 1435 1457 0.97
Sequence Information
- Coding Sequence
- ATGGGTTGGGGGTTATGCTGGGCGGGTGGAGTGGAGTTTGGCACATCTATCACACCAATGGATCTCATGTCGCAGAACATTTGCCACGCCTGCATCAGCTACCTGAACTCATGGCAGAGCTTCAAGAATCGCTGCCTCAGCGCCCAGTTGAAGCAGCGACAGTGGCTGGATACGGACAAATCCAAGCAGCAGACACTGCTGGGCTATCTGGATTTGAACAGGGCGGAGAATGGCGGCAGCAGCAGCACCATTGGAGATCCCCAACACCAGCACCAATCTGAATTGAATCGTATCGATTTGGCAGCAGCAGCAGCAGCTGCGGAGAAGGCGTCCAGCCCCAATATGCTGGATGGCATATCATCGTTGAAGAAGCGCAAATCGTTAACAGTCTATTTGAAGCCAAAAGTATATTTGCCACTGGATATTGCGGTGCCAGCGTTGCCGCCAATGTTGCCCACAGCAGCAACGCCCGTTTTGTCAACTGTTGCTGTTGCTGGTGGAAGTGTTGCTGCTGGTGAGCCACTCACATTGCAGTTGCCTTCAGCGTTGCCAATTGATTTCAGCCAGAGTAAGAATTATAGCCAGAGACAGGGCAATTTGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAACAACAATATCGACAACAAATACGATGAATTTTGGTGGTGGCACAGCAGCAACAGCAACAGTTGCTGCTGGAAGCGCTGCTGCAGTCGCCACACCGACACCATTGCTGATGCCGCCGCTGCCCGCCGTGTCGATCAAGGATGAGCCCCTGGACGATACGGATGATGACTATCAGATGAAGTGCATCGATGAGTCCGATGATATGGTGGATCCAACCATGTTCCTAGAACGCTCCGAGCACGAGGGCGATGTGCCACTAATGACCTCCGACTATGATTATACGGCTCAACACGGCGTTACGGCAGCAGTTGCTGCGGCCTCAAGTTTGCCAGCCACCGCCGTTGCCAATGTGGCAGCCGCTGGTGATTCGAAGGTGGCCAGTTGCCGGGCATGCAGCTTGCAGTTTTCGACGCGTGCGAATGCTCGCCGTCACGAGCGGAATCTGCATCCGAATCTGTTTCAGTTGTCAACCGATTCGCCAAATAATACGCCCATTACGAAACCAACGCCCGCCTTGGCTGCGGCACTGGAGATACAGCGGGCTGCTGCAGCGGCAGCTGCCACAGCGGAGGCAACGAAGGCGGCAGCCGGCGGCAATATATCGGCACAGAAGTATCGTCAGGTTGTGATGAACACGTTCATTAAGTGCGAGAATGGCGGCTACGACTATGATAATCCTGAGCAGTATCAGCAGCTGTTGAGCCGCGACAAGGTGGAGTTCCTGCAGGAGAACAGTGAGTTCCTGGAGCAGTATCAGACAATGACGTGCCGCTGTTGCAACAAATACTTCAGCACCTACAAGAACTTTATGGCGCATGTGCGCAAAAAGTATCCATTGTTGCCACGGAATCTCTGCTTCAATTGCCTCAAGATGAATGATTCCAAGGCATTGTTCATATCGCATCTAAAGAAGCGCAACTGCATCAATCTCTATCGTGTGATGATTGCCATGCGCAGCAAACAGACGTCTACCTCTGCCTCTGCCACTGCCACTGTCACAGCTGCAACAGATCATCATCAGCAGCAATTGCTGGTCTCATCATCATCATCATCATCGACAATTCGACACGAGCTGGCCGCTACTGGTGCTGGTAGTGGTGGCACCGAGAAGCTCCGTGCCAAGGAACTGCTCGCGAATAAGCTCTACGAGTGCAAATTGTGTCCAAAGGGATTCCGCACCAAGCACGAGTTCCGCACCCATGTCTATGACAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCAGCTTCTGTGGACAGGACTTTGCAGATCCCGTGGATCGGCGCCGCCATTACAACAACATGGGCTGCATTGTCCGATTACGTTGCATGACCTGTGATGCCAAACTGGATACTCATCAGCTCTTCCTAGACCATGTCTATCAGGATCATCTTGGCAGCGTCGGAAGTACTGGCGGCGGCGCTGGCAGTGATAATGTATCCGGAGGCGGTCTGGATCAGTCGGGATCTGGCAAACGGCATTTGCTGGGTGCACTCACCATGGCAGCTGGCCAATCATCCAATGATGAGTCGCGTAGCAGCGGTAGCAACACCAACAACAATCACAATGCAAGTTCCAGCGGCGCACCACTCACATCCACGCCCAAGTTGAGCGGATCATCGTTAGCGGTGGGTGCTGTGGGCAATCGTGATGCGCCCAAATCCCAGTACTTTTCGCGTATGCCACAGGTTTGCCCGATCTGTGGCCAGCAGTACAACAACTACAACAATGTGCTGAGGCACATGGAATCGAAGCATCCAAATAAGCTGCCCGAGACGTACAAGTGTGTCCGATGCGGCCTGGGCTATCCACGGATCTCATATCTGCGTGAGCATATGATCAATGTGCATGGCGTCGATAAGAATCGACATTCCGGTGGCTTCGAGTACATCGTCAATGCGGATGCGGTCAAGCTGGCGGATGGCAGCACTCCGAATGTCTATACCGGCCGCTATGATTATGTGATGAAGGATTTGATGTCCATTACAAATGGTGGGACACTCGATGACGAGGAGGAGGAGACGGGCAGTCTGGCCAAGAAGATGCGCCTGGATGATAGCAGCAACAACAGTAGCATTAATACAACCATTGCCAATCAGCAGAAGGAGTGCCCCATCTGTAATGCGGTATTCAGCAACAACATCGGCCTCTCGAATCACATGCGTTCGCATTATACGGCCTCATTGAGTGCATCCGCAAATACGGCGCTGGCTGTTGCTAATCGGATGACACCCAAGTCGCTGACGATAACGGCAACGCCACCGTTGGAAATGTCGGTCACCTCGACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAGCTATGGTGAACCAGACACCGCAGGAACAGGCTGTATTCCGTCGCAGTTTGGATCAAGCGGCTGATCGACGCTTTCGACGAATGCGTTGCCGGATTTGCCAACGTCGGTTCAGCTCCAAGAAATCGTATCGCTATCATATGCTGACCGATCATCAGGTGCAGAATGTGCAGTTTATTAAGTGTAAACTGTGCAATGCGGAATTCGCATACGAGAAGGGACTGAAGGTGCATCTATTCAAGGTGCATGGACGTGCCATCAAGGATGAGATGATTGTGAAGCAATTCGAATGCGATGTCTGCTCCACAGTCTACAGTTCCGAAACGGAATTGCAGCAGCATAAACGCACTGTCCACAAGTCCGTTCCTGGGCTGGACGCCACAAAGTATGCAACGAAATCGGCAACAGCTACAGCTACCTCAGCGACCGAATTGGCCGACAACAACAACACCACAACTGCAACTGGATCAGTAGGGGCAGCTTCAGGTGGAGGAACATCATACAGTGGTGGCGGTGGAGCAGGATCTTCGGCTGCTGCTACCGCCATGCCACTTTATTGGTATCAATGCAAATATTGTCCATCAAATTTCAATACCAATAAGAAGCTGGCGATACACATCAATTCCCACGATGAGTTCGATTCGAATGATTATTCCTGCAAGGATTGCGGCAACGTTTACAGCGGACGAAAGAGCCTCTGGGTGCACCGGTACAAGAAGCATCCACAAGTCCCTGATCCGGCCGAGTGTACACTCTGCCGTAAGATGTTCTTCGACCGGCAAATGTTGGATAATCACACGCCCACCTGCAATCGTAAGCCAATCACTGCCACTGGTGCCCATCAGCAAGATCAGCAGCATCCGCGTGGCATATTCAAGCACAAGACGGGCGACGATGACGACGAGGATGAGGATGATGATCAATTGTTGCTGCTAGAGGATGCTGGTGGTGGCAACAGTAATGGCAAACCATCGACAAGCACCCTAAAGATTCGCATACCAGAGGTGGCATGCACCATATGCGGGGCACGGTTCACGGATCAGGACATGTTCACCAAGCACATACAAAAGCACGAGCAAGAGCTGTATGTGGACAATCCACTGGCAGCCATGTTCGATGATGGGCCCGCCGATCCCGGCCAATTTCAGGTTGATCATCAGAATGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCTTTTTGGACTTGTGCTGGCGAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAACTGGATGA
- Protein Sequence
- MGWGLCWAGGVEFGTSITPMDLMSQNICHACISYLNSWQSFKNRCLSAQLKQRQWLDTDKSKQQTLLGYLDLNRAENGGSSSTIGDPQHQHQSELNRIDLAAAAAAAEKASSPNMLDGISSLKKRKSLTVYLKPKVYLPLDIAVPALPPMLPTAATPVLSTVAVAGGSVAAGEPLTLQLPSALPIDFSQSKNYSQRQGNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTISTTNTMNFGGGTAATATVAAGSAAAVATPTPLLMPPLPAVSIKDEPLDDTDDDYQMKCIDESDDMVDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAAVAAASSLPATAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLSRDKVEFLQENSEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMIAMRSKQTSTSASATATVTAATDHHQQQLLVSSSSSSSTIRHELAATGAGSGGTEKLRAKELLANKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGQDFADPVDRRRHYNNMGCIVRLRCMTCDAKLDTHQLFLDHVYQDHLGSVGSTGGGAGSDNVSGGGLDQSGSGKRHLLGALTMAAGQSSNDESRSSGSNTNNNHNASSSGAPLTSTPKLSGSSLAVGAVGNRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEETGSLAKKMRLDDSSNNSSINTTIANQQKECPICNAVFSNNIGLSNHMRSHYTASLSASANTALAVANRMTPKSLTITATPPLEMSVTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSETELQQHKRTVHKSVPGLDATKYATKSATATATSATELADNNNTTTATGSVGAASGGGTSYSGGGGAGSSAAATAMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLDNHTPTCNRKPITATGAHQQDQQHPRGIFKHKTGDDDDEDEDDDQLLLLEDAGGGNSNGKPSTSTLKIRIPEVACTICGARFTDQDMFTKHIQKHEQELYVDNPLAAMFDDGPADPGQFQVDHQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSFLDLCWRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -