Basic Information

Insect: Drosophila quadrilineata
Gene Symbol: -
Assembly: GCA_018150725.1
Location: JAECWN010000432.1:5882198-5885566[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.8 1.7e+02 2.9 0.1 3 23 115 136 113 136 0.93

2 12 4.8e-06 0.00028 21.0 3.4 2 23 181 203 180 203 0.97

3 12 0.0074 0.43 11.0 9.1 2 23 534 555 534 555 0.97

4 12 1.4e-06 8.4e-05 22.7 2.8 1 23 561 584 561 584 0.96

5 12 8.9e-05 0.0052 17.0 0.5 1 23 589 612 589 612 0.96

6 12 1.5e-05 0.00086 19.5 4.1 1 23 630 652 630 652 0.97

7 12 4.2e-05 0.0025 18.1 1.6 1 23 657 679 657 679 0.98

8 12 3.9e-05 0.0023 18.2 1.7 1 23 685 707 685 707 0.95

9 12 2.8e-05 0.0016 18.6 0.7 1 23 713 735 713 735 0.98

10 12 4.1e-07 2.4e-05 24.4 2.7 3 23 743 763 742 763 0.99

11 12 2.7e-08 1.6e-06 28.1 1.0 1 23 769 791 769 791 0.99

12 12 1.6 94 3.6 5.6 1 23 796 819 796 819 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.8	1.7e+02	2.9	0.1	3	23	115	136	113	136	0.93
2	12	4.8e-06	0.00028	21.0	3.4	2	23	181	203	180	203	0.97
3	12	0.0074	0.43	11.0	9.1	2	23	534	555	534	555	0.97
4	12	1.4e-06	8.4e-05	22.7	2.8	1	23	561	584	561	584	0.96
5	12	8.9e-05	0.0052	17.0	0.5	1	23	589	612	589	612	0.96
6	12	1.5e-05	0.00086	19.5	4.1	1	23	630	652	630	652	0.97
7	12	4.2e-05	0.0025	18.1	1.6	1	23	657	679	657	679	0.98
8	12	3.9e-05	0.0023	18.2	1.7	1	23	685	707	685	707	0.95
9	12	2.8e-05	0.0016	18.6	0.7	1	23	713	735	713	735	0.98
10	12	4.1e-07	2.4e-05	24.4	2.7	3	23	743	763	742	763	0.99
11	12	2.7e-08	1.6e-06	28.1	1.0	1	23	769	791	769	791	0.99
12	12	1.6	94	3.6	5.6	1	23	796	819	796	819	0.89

Sequence Information

Coding Sequence: ATGCCCGATACAACCACTGACTTCGATGCGGAGCGCGTTTGTCGCGTTTGCTTGCGCGAAGTGGGCGATTTCTATTTCATCTACGACGAGGCGCCCGCAGAGCGGGGCGTAAACATTGCCCAGATACTAAACGAATGCACGCGCTACACCTGCGAGAGATTTGACCAGATGCCGCATCACATGTGCGACACCTGCATCCAGGATGCCTGCCAAGCGTACCGCTTCAAGCGTAACGCCGAGAAATCCTATAGATCCCTGGTCTCCATGCTGGGACGAACGCTGCCCACCAAGCCCAACAGCAGCGATGTGTGCACCCAGACGGAACAGGTGGCAACGCTGGCGTGCGGCATCTGCGCTGATCAATTTGTGAATATTGTAGAACTGCGATTGCATCGCAACCGACAGCACAAGCATTTGGAGGATCTCAAGTGCAGACTATGCAGTGTCCACACCGAGTTCCAAAACTTTCGTCAACTGCGTCAGCATCTCGTCGAGGAGCACGACCGCCAATCGGTGGCTCCCTTTCTACGTCGCCGCCTGCAATGTCGCAACTGCCAGCGCTCCTTTAGTCGCCGGGATCATCTCTTGCGCCATGTGCGAACGGTGCATAGTGGCGTACAAGCAGAGCTGGAAGAGAACGATAAGGGAGATGAGGGAGATGGAGATGAGGAGCAGCACATGGCAAACCATTGGCCGGCCATCGATGAGACGACCATGCAGAGCGGCGGTATGGATGAACTGGAGTCAACTGCAGTTCTATTAAATACGACGCACAGCTCCAATGATGATGAAGACATGACCATTAACAATGGAGACATTTACCTCTGCCATACGAATCCTATTTCCAGCAATGAAGAGGAAGCCGAAGACGACGACGATAACGTGTCGGATGCTGAAGCTAAGCAATCCCTGTGGCTGCACATTAAACCAGAACCGGAGGCGGATCCGCAATCCAATGACACCGCCTCTGACTCCACCCCCGCTGTGCTTCAAGTGAAACGTGAGAAACGGCGACGAAAGCCTCCGTTGTCTAAGGAGCAGGAGGAGCAGGAGGAACTGGAGCAGTCCCATGAGAGCCATCGAAGGACATCAACTCCTGCGGATGTCAAGGTGGAACCCTTAGCCAGTGCCGGGGAGCAGCAGGTGCCCATAAAGCAGGAGGGTCCGCCAGTGAGTAGCCTTAAGGAGCACAAAGAGAATGAAGATTACTATGCGCAAGATGTGGAAGTGGATACATCCACAGTTGCGGATGCCATGCACAGTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGAGATGGGGAAAGCGATGAACTTGATAGGAAAACGGCCGCACTTAAAACAGACATCGAGTCCACGAGTCCCAAATCGAAACAATCCCAAGCCAATCAAGTGGAAATCGTACGGGAATATCTGGAGAAATCCTCAACGGGGGAGAAGCCTTCACAGCAGCGGCGTCGTCGTCGCCGCAGTAAACCAACGGATGCGGCTGAAGCCAACCCAGAGAATCGCTGTGACATCTGTCAGCGGACATTCTCGCGCCATTGCCACTTGTTGCGGCACAAGCTGTCGCATCTGGAGAAGAAGCCGCATAGCTGCCCTCACTGTCCCAAGGCGTTTGCGCGCAGCGATCACCTGAAGGCGCATGTCCAGAGTCTGCATGGCAGCAAGGAGCACAAGTGTGTGCTCTGCGATGCGGCCTTCACCCGCCCAGATGCGCTCGAGCGGCACAAGCTCAGCAAACACAATGGCGAGGGCGTTGATGCCGCCATCGAGATTAAGCTGCAGATGAACGAACACACCTGCGAATATTGCTCAAAGCGATTCTCCAGCAAGGCCTATCTGCGCAAGCATACCCTCATCCATACCGAGTTCCTCTACGCCTGCAAGAACTGTGACGAGACCTTCAAGGAACGGCAGCAGTTGCGTAGCCATGAGAAGACCCACACCGGTCAGCGCAACTTCCTCTGTTGCATTTGTGGCGATAGCTTCGCACGCAACGACTATTTACGCGTTCACATGCGGCGCCATAATGGCGAGAAGCCGTACAAGTGTCGCTACTGTGTCAAAGCATTTCCACGTGCCACAGACCTCAAGGTGCACGAACGTTATCATACGGGCACCAAGCCCAATCTGTGCAACACGTGCGGCAAGAGCTTCCATCGCGCCTACAACCTGACCATACATATGCGGACGCATACGGGCGAACGGCCATACAAATGCGATCAGTGCCCGAAGAGCTTCAGCCAAAGCAACGACCTGAAGGCCCACATCCGACGTCACACGGGCGAACGCTACAAGTGCCCCCACTGTGATGCGTACTTCCTGCAGCTGTATCACATGCGCAACCATTGCCTCACCGCACACAACAAGCACATCGAGACGAAGACGGGCAGATTGCAGCGCACCGGACTGCTCGATGAGCCCACCCAAAGTCATCTGACCACGGTCGTGATGCCGCCGGCACGATATGTGCCACAGCCGCATGCTATCAACGAATTAACGCCTGGAGCGCCAACAGCAACAACAACGACAGCGGCTGCTGCAACAGCGACAGCCATTGCAACAACTATTGTGCAATCACCGGTGGCATACAACACGGCATCACCTGTGGCTGTCACCGTGCCAGTTCCTGTTCCCGTTCCCGTACCACTGCCCATGTCTGTAAGTGTGCCCGTACCCGTGCCAGTAACGTTGCCGGTTAACGTGAGTGTGCCCGAAGGTGTTGGCTTTGTGACCGCAACAAATGCAAATGCAAATGCGCAAGGCGCAGCTGCAACGACTGCATCACCATTTGGAACATTCAACATAACGCCCGCCGTCATGGCGCATCTCATGTACAATAACAGCCAGCAGAGCAGTGCCAGTGGCAATGAAGCCAGCAAATAG
Protein Sequence: MPDTTTDFDAERVCRVCLREVGDFYFIYDEAPAERGVNIAQILNECTRYTCERFDQMPHHMCDTCIQDACQAYRFKRNAEKSYRSLVSMLGRTLPTKPNSSDVCTQTEQVATLACGICADQFVNIVELRLHRNRQHKHLEDLKCRLCSVHTEFQNFRQLRQHLVEEHDRQSVAPFLRRRLQCRNCQRSFSRRDHLLRHVRTVHSGVQAELEENDKGDEGDGDEEQHMANHWPAIDETTMQSGGMDELESTAVLLNTTHSSNDDEDMTINNGDIYLCHTNPISSNEEEAEDDDDNVSDAEAKQSLWLHIKPEPEADPQSNDTASDSTPAVLQVKREKRRRKPPLSKEQEEQEELEQSHESHRRTSTPADVKVEPLASAGEQQVPIKQEGPPVSSLKEHKENEDYYAQDVEVDTSTVADAMHSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDGESDELDRKTAALKTDIESTSPKSKQSQANQVEIVREYLEKSSTGEKPSQQRRRRRRSKPTDAAEANPENRCDICQRTFSRHCHLLRHKLSHLEKKPHSCPHCPKAFARSDHLKAHVQSLHGSKEHKCVLCDAAFTRPDALERHKLSKHNGEGVDAAIEIKLQMNEHTCEYCSKRFSSKAYLRKHTLIHTEFLYACKNCDETFKERQQLRSHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRYCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFSQSNDLKAHIRRHTGERYKCPHCDAYFLQLYHMRNHCLTAHNKHIETKTGRLQRTGLLDEPTQSHLTTVVMPPARYVPQPHAINELTPGAPTATTTTAAAATATAIATTIVQSPVAYNTASPVAVTVPVPVPVPVPLPMSVSVPVPVPVTLPVNVSVPEGVGFVTATNANANAQGAAATTASPFGTFNITPAVMAHLMYNNSQQSSASGNEASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -