Dqud007964.1
Basic Information
- Insect
- Drosophila quadrilineata
- Gene Symbol
- -
- Assembly
- GCA_018150725.1
- Location
- JAECWN010000219.1:7152587-7154289[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-15 3.4e-12 45.7 0.0 2 45 371 414 370 414 0.93 2 3 0.035 70 3.1 0.0 28 37 444 453 439 458 0.88 3 3 8.7e-20 1.8e-16 59.4 0.0 2 42 480 520 479 522 0.96
Sequence Information
- Coding Sequence
- ATGAATCACCTAAAATGGATGGGTCACTCGTCCACAATAATGGATATTCAGCGCGTTCTCCTCAACCAGCAGAGCACCAACCAAAGCTGCGAGGTGATGCTAGTGGCCAAAGATGGGACCACTGTACGAGCCCATCTCTTCGTGCTGAGCACATGCAGCGATTTAATGCGCAATTTGTTGGTCGATCTACCCATTGGTCAGGAGGCCACCGTGATACTGCCAGACATACGCGGGGAGCTCCTTGAGAGTATGTTGTCGTTCATCTACATGGGAGAAACGAGTGTGCCCTCGGCACTGCTCACCGAATTTCTGGAGGCGATCAACCTTTTGGGCATCAAGTCAGCGATAAGTTTTGAAACAAACGCAACAGCGATGAACACTCCAAGCATGGCCAGTGGCGCCATGGCTGTGGAGGCCGCGAAATCTATCACCGGCTTGCATATAGCGAATACAACAACCATCATGGAGGAGGAGGTGGAAGATGCCAATGTTGTGGTTGAAAAAATGGATGTAAGTAATTCTGTACTCGGTGGCGACCATCAGCAACAGCCTCAGCAGCAGGACGGCAGATCTTTGGAATTCCTGGATGTGTACAGTGATCAGCCGAAAATCACGTATTCCATTGAACACATGGGCGGCAGCTCCAGTGGTAATCAGTACATATTGACAGAGAATACGGGCACATTTACAATCACACAGTCGGCGACGACATTGACCAAATTGGGAGCGCCCGTCGGTACCGCTGTTGTGAATCCTGTCACTGCAGCGGATCTGGGTGAGGAGGATGGAGACGCCGATGTAACCGATGATCATGATGAATCCGAGTCACATTTAATTGAGGAGGAGTACGTCTCATCCGCTGGACCTCTGATAGAGATGAGTGCGGAGGGGCATGTGGATATGACTGATGAAGCCTTGCACGAGGAGGACGCTGTCGAGGAGGAGGACGACGAAGAATTGTTGGACGTGAAACCTCGTAAATCTCAATTAGATTTGAAGATTCTGAAATCCAGAGAACGCCAGCGTCCATCACCATCGAAATCCGTAAAGAAAGTGACCAAACAGCATCAACAATATGCGGCTCTCAAGAAGGAGATCAAGGACGACATCAACGATGCCTTGGAACTGGCAGCGGACGCCGTCCTCCACGAAGGTCTCAGCCTACAAAAGGCTGCTGATCGCTATGAAATATCCAAAACCGTGTTATGGCGACGAGTGCGTTCCAATCCCGCCTACTTGAGAATAAAGCGAGAGAAGCCATCTCTATCAGAGGCATATGAGCGTTTGAAGAATGGAGATTCGTTGAAGAGCATCAGCCAAGAATTGCAGATTCCCATGTCCACGTTACACAGGCATAAGGTGCGGCTAGCGGCACAAGGACGTCTGCCCGATTTCGTGTCCTGTCGACGAAGGGACAGCACGCCCAAGGATGAGCTGAGAGATAAGTTAGCCAAAGCAGTGCATGCCTGCATCAACGAAGGCATGTCCCAGAATCATGCAGCCAATCTCTTCGAAATACCCAAGAGCACGCTGTGGAGACATTTACAGCGTCGTGTCACGGAGGCGGAGAGAAAAGTGAAAGAGGAACAGGAAGACGAGGATGATGGTCTACACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRVLLNQQSTNQSCEVMLVAKDGTTVRAHLFVLSTCSDLMRNLLVDLPIGQEATVILPDIRGELLESMLSFIYMGETSVPSALLTEFLEAINLLGIKSAISFETNATAMNTPSMASGAMAVEAAKSITGLHIANTTTIMEEEVEDANVVVEKMDVSNSVLGGDHQQQPQQQDGRSLEFLDVYSDQPKITYSIEHMGGSSSGNQYILTENTGTFTITQSATTLTKLGAPVGTAVVNPVTAADLGEEDGDADVTDDHDESESHLIEEEYVSSAGPLIEMSAEGHVDMTDEALHEEDAVEEEDDEELLDVKPRKSQLDLKILKSRERQRPSPSKSVKKVTKQHQQYAALKKEIKDDINDALELAADAVLHEGLSLQKAADRYEISKTVLWRRVRSNPAYLRIKREKPSLSEAYERLKNGDSLKSISQELQIPMSTLHRHKVRLAAQGRLPDFVSCRRRDSTPKDELRDKLAKAVHACINEGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEDEDDGLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00584522;
- 80% Identity
- iTF_00584522;