Basic Information

Gene Symbol
osa
Assembly
GCA_018150725.1
Location
JAECWN010000375.1:1562288-1583293[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7 7.4e+03 -2.7 0.0 13 46 769 805 764 807 0.80
2 2 4.7e-25 1.3e-21 76.7 0.0 3 89 1017 1103 1015 1103 0.92

Sequence Information

Coding Sequence
ATGAATGACAAAATAAAATCGCCCTCCACAGCTGCGCAAGGTAGCGGAGGCGGTGGACCATCTGGTGGTAATAGTAGTGGACCGCCGTCTGCTGCGGCGAACGCTGCTGGTGGCGCCACACCACCTACATCGGGTCCGCCCACGCCAAACAACGGCAATGATCCCATAATACAGCAGGGCGGCACTGTACCCCATCCATACGGCGGACCACCGCCAGGCTCAGCACCTGGTGGGCCACCTGATCCAGCAGCTGTTATGTCGCATTATCACCATCTGCACCAACAGCAGCAGCAGCCTCAACATCCACAAGGACCGCCTTTACCACCACACATGCAACACCACGGTGGACCACCTCCGCCACAGGGACCACTGCCGATACCAGGAGCACCTGAGCATACGCCCGGTGGTGTCAAGGATGAATATGGGTCAGCACATTTGCCCCCACCACCCGGTGTACAACACCAGCATGCCCATCCCGCCTATTCGCGTTATCACACAGGCGATCCCAACCTAGATCCGTATCGTTATGGCCATGCTCCCACGCAGCAGCAGCCACCCCCTGGCAGCAAGCCGCCGCACCAGCAACAACAGCAGGGCCAAGGTGCCGGAGGATCACCCAATCGGCCACCACAGCAACGCTACATACCTGGACAACCGCCTCAGGGTCCAACACCAACATTAAATTCATTACTGCAATCGACCAATCCGCCGCCACCGCCCCAACATCGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTGGGCCTCCGCCCCCAATTCCCGGCCATGGACCGCCGCCGCCACAACACCAGCCATACGGAGCGCAACAAGGTGGTTGGGCACCACCGCCGCGGGCCTACAGCCCACAGCTGGGACCCTCACAGCAGTATAGGACACCTCCACCGACAAACACTTCCCGAGGTCAATCACCATATCCGACAGCTCACAGTCAAAACTCAGGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGGCGGTGTTGGTGCACCCGGTGCACCAGCTCCTCCACCTGGGCCCGCCCAGCAGCAGCAACAACAGAATACACCGCCCACATCTCAATATTCGCCGTACCCGCAAAGATACCCAACTCCGCCCGGTCTGCCTGGGTCTGGGCCAAATCATCGAACTGCCTACACAACGCACCAATATTCCGAACCAAATCGACCGTGGCCTGGCGGCTCATCACCTAGTCCTGGTCCTGGCCATCCATTGCCGCCTGCCTCACCGCATCATGCTCCGCTGCAGCAACCGCCAACGCCGCATTCCGCAGCTGGTGGCCCGCCACCAAGCAGCAGTCCGGGGCATGCGCCAAGTCCATCGCCGCAGCCCTCGCAGGCATCACCATCCCCACATCAGGAGTTGATTGGTCAAAACAGTAACGATAGTTCGAGTGGCGGTGCACATAGTGGCATGGGATCTGGTCCACCTGGCACCCCAAATCCACAGCAAGTAATGAGGCCCACACCCTCGCCAACTGGCTCATCGGGCTCAAGATCAATGTCTCCTGCCGTGGCACAAAATCATCCAATCTCGCGTCCGGCGAGTAACCAGTCAAGCAGTGGGGGTCCAATGCAGCAACCGACTGTAGTCAGCGGTCCACCACCGATGCCACTGCACGGTCTATCCGGCGGGCCGCCATCTCAGCAGCAATCTCAGCAGCAACAGGCTTCAAATTCAGCGTCGTCGGCCAGCAATTCACCACAGCAGACGCCACCACCAGCCCCGCCGCCAAATCAGAATGTGAATAATATGGCAACACCACCGCCGCCGCAAGGTTCCGCCGGTGGTGGCTATCCCATTCCCCAGCATATGCATGGCAGTTACAAAATGGGCGGACCGGGACAAAGTCCTGGCGCTCAAGGATATCCTCCGCAACAATATCAACAAGGTAACTACCCGCCACGGCCACAGTATCCGTCGGGCGCGTATGCCACTGGGCCACCACCTCCGCCTACCAGCCAAGCTGGCGGAGCCAATAGCATGTCATCCAGCGCACAATCTGGTTATCCACGATCAATGCCGAACCACAGCGGTGGCAGCCCTCATCCACAGTATCCACCATATCAGTGGGTGCCACCATCGCCGCAACAGTCAGTGCCTGGAGTCGGCGCGGGTCAACTTGGTGCATCGATGGGCAATCACGTGCAGGGCAAGGGCACACCACCTCCAGTGGGACCGCCACCACCACAGGGCAGTGGTTCTCCACGTCCCCTGAATTATTTGAAACAGCATTTACAGCACAAAGGTGGATATGGTGCCAATCCAGCAGCACCACAGCCCCAGGGCTACGGGAATGGGCCGACCGGCATGCATCCATCCATGCCAATGGGTCCGCCACATCATATGGGTCCGCCTCAAAGTATGGGTCCTCCCACCAGCACACCACCGCAGTCAATGTTGGGCTCCCAGCCTGGCGGCAGTGACAGTGGCCCAGAGCATATATCGCAGGACAATGGCATCAGTTCATCGGGGCCATCACCAGCATCCGGTATGCATGCGGTAACTGCTGTCGTCACAACTGGTCCAGATGGCGCACCCATGGACGAAGTTAGTCAACAGAGCACGCTCTCGAATGCTTCAGCTGCCTCTGGCGAAGACCCACAATGTACTACACCAAAGTCGCGCAAACATGATCCATATAGCCAAAGTCATTTAGCACCACCAAGCACATCTCCACATCCCGTTGTCATGCATGGGGGCGGTGGTCCGTCTGGCGAAGAATACGACATGAATTCACCACCCAATTGGCCACGTCCAGCTGCTGGAGCGCAGGTATTCAACAGTCATGTTCCTGTTCAGCAAGAACCCTTTCGTAGCACCATTACGACCACAAAGAAATCGGATTCGCTGTGCAAGTTGTACGAGATGGATGACAATCCGGATAGACGGGGCTGGCTGGACAAGCTGCGCAACTTCATGGAGGAACGACGCACGCCAATTACGGCGTGCCCCACCATCTCCAAACAGCCACTCGATTTATATAGGTTATACATTTATGTAAAAGAACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAGAGCAAGACCTGGAAGGATATTGCGGGTCTGCTTGGCATCGGCGCCAGCAGCAGCGCTGCCTACACACTACGCAAGCATTATACAAAGAATCTTCTGGCATTCGAGTGTCACTTTGATCGTGGCGACATCGATCCTTTGCCCATCATACAGCAAGTTGAGGCCGGCAGCAAGAAAAAGACAACGAAGGCAGCATCGGTGCCATCACCAGGATCATCGAATTCGCAGGATTCGTTCCCGGCACCACCCGGTAGTGCACCCAACACCTCTATCGACGGCTACACGGGCTACTCGGGTGGTGGCGGTGCCTATCCAGCTGCCTCCGGGCCACAGCCAGACTATGGAGCCGCTGGACAGATGCAGAGACCGCCATCGCAATCAAATCCGCAAGCACCGCATCCCGGCACACAAAATCAAACGGGCGCCTCCGCCGTAGTTGTTGCCGGTGATAACATAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCACAATCAAACAATCATCCACACCATCCACAACAACAACAAGGCATTCCAACACAGTTGCCGCCACCGTCACAACAACCACCGGCACCACCACCACAGCAACATGGTCCGCCATCGACGCAACAGCAGCATGCGCGCCCTGCAACTGGAGTACCTTATCCACCAGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGCTCTCCGTATCCAACACAGCCGGGTGCATATGGTCAATATGGTGCCGGCGATCAGTATAATGCCGCTGGGCCACCGGGTCAGCAGTTTGGGCCAAATCAGGGACAGTATCCGCCGCAGAATCGCAATATGTATCCTCCCTATGGACCAGAAGGGGAAGCACCTCCAGCGGGTGCGAATCAGTACGGTCCTTATGGCAGCCGACCATATAGTCAGGCGCCACCTGGTGGACCGGGTCAGCCGCCAACGCAAGCCGGAGCAGGTGGACCACCGGCTGGAGGTGCCGCAGTGGCACCGCCAAACAGTGGCTATGCACCTGGCACCCCCAACCAGCAGGACTACTACCGACCGCCCGATCAAAGTCCTCAGCCACGTCGACATCCTGATTTCATCAAAGACTCCCAGCCTTATACTGGCTACACAGCGCGGCCTCAGCTTTATGCTGGATGGCAAGGTGGCAATGCACAGTATCGTGCCCAGTATCCCTCATCGTCGGCTCCACAGTCCTGGGGTGGTACACCGCCAAGGGGTGCTGCTCCACCGGGTGGACCACATGGCCCGCATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTGGTCAGACCCTGCCACAGCCACCACATGTGGGCGTGCCAACACCAAATATGCCACCAGTGGCCGGTGGCATGACAAAGCCACCTTATGCGATGCCACCTCCATCCCAGGCTGGCGGTGTGCCACCTGGTGTACCCGGCATGGTGGTGGGTACTCCACCCGGCAGCATGATGCCGCAGAAGCAGCAGCAGCCCATCGTTGGTCAGGGCATGCCACCGGCGCAACAGCAACCTCCGCACCAAATGCCACCCAATCAGCAGGCGGCGTTTGCACCTCAAGTTCCTGGTGCTGGCGCCCAGCTGGTAAAGAAGGAGCTCATCTTTCCGCTTGATAGCGTGGAGTCCACCACACCGGTGCTATATCGTCGCAAGCGCTTGACAAAGGCTGATGTCTGTCCCGTGGATCCATGGCGGATATTCATGGCCATGCGTTCGGGTCTGCTTACGGAATGCACCTGGGCACTAGATGTGCTCAACGTACTGCTCTTCGATGATGCCACGGTGCAGTTCTTTGGCATCTCGAATCTGCCTGGTCTGCTGACGCTGCTGCTCGAGCACTTTCAGAAGAATCTGGCCGAGATGTTCGACGAACGCTGTGAGGAGGGGGCAACCGATGAGGCTGATGATGATGCTGACAGTGGCACCGTCATGTTATCCCTGCAGGGGGATGACCAGAAGCTACGCCGACGGCAGCCCCGATGCGTGCGCAGCATTTGCAGCTACAATCGGAAGCGCCACTATGAGAATATGGACGTGAAGCGTAGTGGTGGTAATCGTGCTGGAGAGGATTCCGATGATGCCGACGAGGGCATCGATTTGGGCCAGGTGCGAGTCCAGCCGAACCCCGAGGAGCGTTCCCTGCTGCTCTCCTTTACGCCCAACTACACAATGGTCACACGTAAGGGTGTGCCCGTGCGGATTCAGCCGGCTGATCAGGACATCTTTGTGGACGAGCGCCACAAAGCCTGGGATATTGATACGAATAAATTGTATGAACAGCTTGAGCCGGTGGGCAGCAATGCCTGGACATACGGCTTTACGGAACCCGATCCGCTTGATGGTATCATCGATGTGTTCAAATCGGAGATCGTTAACATTCCATTCGCGCGTTACGTACGCACGTCCAAGCACAAGGAACAGAAGCGAAACAACAACAGCCAAGTCCGAGTAGTCGCCGACAACGAGGAGACGGTTGTTGTCAAACAGGAGGATACCACGACCAGCACTACCAGCAGCAGCAACACCGAGGATAGCAGTGTCCTCCAGCAGACCTACAACAAGAAGCGGAGGCTGGTCAGCAACAGCACAGGTGATATCCATAAAAAGTCCAAGACAGAGGAGGAATTCGCTCAGCCAGCGATCGAGGTAAAGAAGGAGCCAGGAGTTGAAGCCGCTACTCCTGGTGATGCACCTGCTCCTAGCAATACAACGGATAGCGACTGCCGTGCCGTGGACATGGAGATTGAGTCGCCACAACAGCAGCGTCTGACCAATGGAGTCATGGGATTTGATCCCAAGTCAACGGTACGGGATGTGGCACAAGTCTTGCAGCGACGTCGCGACTCCAGCTTCGAGGATGAATGCTATACACGGGATGAGGCGTCGTTGTATCTGGTAAACGAAAGCCAGGACTCGTTGGCCCGACGCTGTATCGCGCTCTCGAATATCTTTCGTAATTTGACCTTTGTGCCCGGCAACGAGACGGTACTGGCCAAATCTACACGTTTCCTGGCTGTGCTGGGTCGCCTCCTCCTGCTGAATCACGATCATCTGCGACGCACGCCCAAGACCCGCAACTACGATCGCGAGGAGGATTCCGACTTCACCGATTCGTGTAGTTCGCTGCAGGGTGAGCGCGAATGGTGGTGGGAGTATCTGATCACCATAAGGGAGAACATGCTGGTGTCCATGGCCAATATAGCGGGTCATCTGGAGCTCTCCCGCTACGATGAACTGATCGCTCGCCCGCTTATCGATGGTCTGCTCCATTGGGCTGTCTGTCCTAGTGCACATGGTCAGGACCCGTTCCCGTCCTGTGGCCCCAACACGGCATTATCCCCGCAACGTCTCGCCCTGGAAGCGCTATGCAAATTGTGTGTGACGGACGCGAATGTGGACTTGGTGATTGCCACGCCTCCATTCTCACGGCTCGAGAAACTCTGCGCCGTGTTGACCCGCCATCTGTGCCGGAACGAGGATCAAGTGCTGCGTGAATTCTCGGTAAATCTGCTGCACTATCTGGCCGCAGCCGACAGTGCCATGGCCCGGACCGTGGCACTGCAGTCACCGTGTATCTCCTACCTGGTGGCCTTCATCGAGCAGGCGGAACAGACCGCATTGGGAGTGGCCAACCAGCACGGCATCAATTATCTGCGCGAGAATCCCGACTCGATGGGCACCAGCCTGGACATGCTGCGACGAGCAGCCGGCACGCTACTCCATCTGGCCAAGCATCCCGACAATCGGTCGTTATTCATGCAGCAGGAGCAGCGATTGCTGGGACTGGTCATGTCGCACATACTCGACCAGCAGACTGCGGCGCCTCCGCCAACCAATGCCAATACGACGGCTGCCGTTGCGTAG
Protein Sequence
MNDKIKSPSTAAQGSGGGGPSGGNSSGPPSAAANAAGGATPPTSGPPTPNNGNDPIIQQGGTVPHPYGGPPPGSAPGGPPDPAAVMSHYHHLHQQQQQPQHPQGPPLPPHMQHHGGPPPPQGPLPIPGAPEHTPGGVKDEYGSAHLPPPPGVQHQHAHPAYSRYHTGDPNLDPYRYGHAPTQQQPPPGSKPPHQQQQQGQGAGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSTNPPPPPQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPPPPIPGHGPPPPQHQPYGAQQGGWAPPPRAYSPQLGPSQQYRTPPPTNTSRGQSPYPTAHSQNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVGAPGAPAPPPGPAQQQQQQNTPPTSQYSPYPQRYPTPPGLPGSGPNHRTAYTTHQYSEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHSAAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVSGPPPMPLHGLSGGPPSQQQSQQQQASNSASSASNSPQQTPPPAPPPNQNVNNMATPPPPQGSAGGGYPIPQHMHGSYKMGGPGQSPGAQGYPPQQYQQGNYPPRPQYPSGAYATGPPPPPTSQAGGANSMSSSAQSGYPRSMPNHSGGSPHPQYPPYQWVPPSPQQSVPGVGAGQLGASMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYGANPAAPQPQGYGNGPTGMHPSMPMGPPHHMGPPQSMGPPTSTPPQSMLGSQPGGSDSGPEHISQDNGISSSGPSPASGMHAVTAVVTTGPDGAPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGGGGPSGEEYDMNSPPNWPRPAAGAQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRNFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGSAPNTSIDGYTGYSGGGGAYPAASGPQPDYGAAGQMQRPPSQSNPQAPHPGTQNQTGASAVVVAGDNINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSNNHPHHPQQQQGIPTQLPPPSQQPPAPPPQQHGPPSTQQQHARPATGVPYPPGSSGYPTPVSRTPGSPYPTQPGAYGQYGAGDQYNAAGPPGQQFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGSRPYSQAPPGGPGQPPTQAGAGGPPAGGAAVAPPNSGYAPGTPNQQDYYRPPDQSPQPRRHPDFIKDSQPYTGYTARPQLYAGWQGGNAQYRAQYPSSSAPQSWGGTPPRGAAPPGGPHGPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQTLPQPPHVGVPTPNMPPVAGGMTKPPYAMPPPSQAGGVPPGVPGMVVGTPPGSMMPQKQQQPIVGQGMPPAQQQPPHQMPPNQQAAFAPQVPGAGAQLVKKELIFPLDSVESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDATVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEEGATDEADDDADSGTVMLSLQGDDQKLRRRQPRCVRSICSYNRKRHYENMDVKRSGGNRAGEDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQPADQDIFVDERHKAWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRTSKHKEQKRNNNSQVRVVADNEETVVVKQEDTTTSTTSSSNTEDSSVLQQTYNKKRRLVSNSTGDIHKKSKTEEEFAQPAIEVKKEPGVEAATPGDAPAPSNTTDSDCRAVDMEIESPQQQRLTNGVMGFDPKSTVRDVAQVLQRRRDSSFEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDSDFTDSCSSLQGEREWWWEYLITIRENMLVSMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-