Basic Information

Insect: Drosophila putrida
Gene Symbol: -
Assembly: GCA_037043535.1
Location: JBAMBI010000465.1:5281869-5284227[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 4.4e-06 0.0003 21.1 0.8 1 23 206 228 206 228 0.99

2 6 4.6e-06 0.00032 21.0 2.3 1 23 234 256 234 256 0.98

3 6 3.2e-06 0.00022 21.5 3.0 1 23 408 430 408 430 0.98

4 6 5.3e-05 0.0036 17.7 4.9 1 23 436 458 436 458 0.98

5 6 0.057 3.9 8.1 1.9 1 23 464 486 464 486 0.98

6 6 0.0016 0.11 13.0 1.4 2 23 520 541 519 541 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	4.4e-06	0.0003	21.1	0.8	1	23	206	228	206	228	0.99
2	6	4.6e-06	0.00032	21.0	2.3	1	23	234	256	234	256	0.98
3	6	3.2e-06	0.00022	21.5	3.0	1	23	408	430	408	430	0.98
4	6	5.3e-05	0.0036	17.7	4.9	1	23	436	458	436	458	0.98
5	6	0.057	3.9	8.1	1.9	1	23	464	486	464	486	0.98
6	6	0.0016	0.11	13.0	1.4	2	23	520	541	519	541	0.96

Sequence Information

Coding Sequence: ATGGAGCTTTCGTCTGCTGGCTGCGCCGATTGCTGTACCGACTGCGCCAACGTCTCCCCCGCATGTTGCGATGCCGCCTGCTGTGAGGCGAACTGCCAACTGATTCCgccagatggcgccaccagcTATGAGTACCATGAGCCCGAAGAGAACTTTGTCTCCATTGACGATGCCAAGATTAAGAGTTTGTTGCTCAAgattgcacaacaacaacaacaacagcagcagcaggaactgCAGCGTCAGCAACAAGAGCAGATTATAGAGCTtttggatgatgatgaggcgATTGTTGAACAACCGCCATTGATGATTATTGGTGCAGCGCGAAGCTTACGATCCTCACCAGATATACAACTCATTCCCAAGCTAATGGAACCACAGCGAATTGTAGCGAGCATTGAGCTAAGTGACAGTGAAGCCGAGGAAGAGAATGAGGATGATAGAGATGGAGATTTACCCTTAACAACAGTTAGTTGTGAACTTAATGAACCAAGTCCTATTATTGTCCTCCAATCGGATGACGAAGAGCAACAGCTCCAATCGGAGCAAACAAAAGTTGGTCCCAAAAAGCGACCTACAAGGCCCTATATTAAACGTCGTGGTCGTCATTTCTATCAGTGTCAAGCGTGTGGCAAGAAAGTCCAATCCAACTACAATCTGCGGCGTCACATGATGATACACACAGGAGAGCGTCCTTTTCCTTGTGATTTGTGCGATCGGCGTTTTCGAGAGTTCAGCGATCTCAAGAAGCATCGACGGCGTCATTTGAACGATCCACGCTATATATGCATGATCTGTAGAATATATCCACCTATGGAGCAGGACTCTACGCGCTGTGTGGATTGCGAGGGAAAGAATCTGTTCCTTGAGCCGCAGAGCTATGAAGAGGAAATGCAGGGGAACATCGGTGTAAATGCTGTGGAGAATGaaaaggaagaggaagaagaggcggagcaggagcaggaagaTATTGAACAGCAGGAGGATAAGGAGATTAAGTCACCACCAGCACCTATAGATTCGTCCCCACCCGTGTTGCTGGTGACTCTAGTGCCTCCGCTAGCCACGCCTACGCAGCCGCCTCCCCAAAATGTGGTTCCTGCTCCTCCGTCACGTCCGCCAATGCCCCGAAGCTGCAGCAGTGCCAATTCCTCATCTTCGCTTAGCAATGATGCGATTCCAAGAGTTCAAGCCAGAGTTTCACGCAATCGACGCTCCTATCCCTGCCCTCTGTGCCATCGTCCCTTTGGCACGCGTCACAATCTCAAACGTCACTATATGATCCACACCGGAGAGAAGCCTTTCAGCTGTAGCAAGTGTCGTAAACCATTCCGAGAGTGCTCCACACTCAAGAAACATATGGTTACCCATGTACGTGATCGTTTGTATAAATGCCCTCGATGTCCTGCCAAATATCAAGACTATCTGCATTACACGGAACACAAGGCGACACATGGCCCGGAGCCACAACAGGACACGGATTCAAACAATCAGCGTTCAAGACAGCGTTCCTCCGATAGTGAAGATGGTGATAGTTCTCTCGAAGATTGGCTGGAATGCTGTGAATGTCAACGTCGCTTTAGTGAACTGGATGCCTATACTGCGCATCTTAAACAACACGATTTGGAACTGTATGGTATGAGTGTCGATGATCTGGACGACGAGGATCAGGAGGTCGATGTGGCCTAG
Protein Sequence: MELSSAGCADCCTDCANVSPACCDAACCEANCQLIPPDGATSYEYHEPEENFVSIDDAKIKSLLLKIAQQQQQQQQQELQRQQQEQIIELLDDDEAIVEQPPLMIIGAARSLRSSPDIQLIPKLMEPQRIVASIELSDSEAEEENEDDRDGDLPLTTVSCELNEPSPIIVLQSDDEEQQLQSEQTKVGPKKRPTRPYIKRRGRHFYQCQACGKKVQSNYNLRRHMMIHTGERPFPCDLCDRRFREFSDLKKHRRRHLNDPRYICMICRIYPPMEQDSTRCVDCEGKNLFLEPQSYEEEMQGNIGVNAVENEKEEEEEAEQEQEDIEQQEDKEIKSPPAPIDSSPPVLLVTLVPPLATPTQPPPQNVVPAPPSRPPMPRSCSSANSSSSLSNDAIPRVQARVSRNRRSYPCPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDRLYKCPRCPAKYQDYLHYTEHKATHGPEPQQDTDSNNQRSRQRSSDSEDGDSSLEDWLECCECQRRFSELDAYTAHLKQHDLELYGMSVDDLDDEDQEVDVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507155;
90% Identity: iTF_00558201; iTF_00608721;
80% Identity: -