Basic Information

Insect: Drosophila putrida
Gene Symbol: -
Assembly: GCA_037043535.1
Location: JBAMBI010000160.1:837688-842746[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.001 0.071 13.6 0.5 1 23 142 164 142 164 0.98

2 14 0.0005 0.035 14.6 2.2 1 23 399 421 399 421 0.98

3 14 3.5 2.4e+02 2.5 0.7 1 23 427 450 427 450 0.92

4 14 0.09 6.2 7.5 1.5 1 23 478 501 478 501 0.95

5 14 0.0013 0.092 13.3 1.9 3 23 789 809 788 809 0.92

6 14 0.049 3.4 8.3 1.4 1 23 815 838 815 838 0.98

7 14 0.33 23 5.7 1.5 2 23 875 896 874 897 0.92

8 14 0.0033 0.23 12.0 0.4 1 23 918 941 918 941 0.97

9 14 0.011 0.75 10.4 0.9 1 23 1159 1182 1159 1182 0.91

10 14 0.0033 0.23 12.0 3.4 1 23 1195 1217 1195 1217 0.98

11 14 0.00018 0.012 16.0 0.2 2 23 1223 1245 1222 1245 0.95

12 14 0.00047 0.032 14.7 3.8 2 23 1256 1280 1255 1280 0.90

13 14 0.046 3.2 8.4 0.3 1 23 1285 1307 1285 1307 0.96

14 14 0.02 1.4 9.6 1.2 1 23 1313 1336 1313 1336 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.001	0.071	13.6	0.5	1	23	142	164	142	164	0.98
2	14	0.0005	0.035	14.6	2.2	1	23	399	421	399	421	0.98
3	14	3.5	2.4e+02	2.5	0.7	1	23	427	450	427	450	0.92
4	14	0.09	6.2	7.5	1.5	1	23	478	501	478	501	0.95
5	14	0.0013	0.092	13.3	1.9	3	23	789	809	788	809	0.92
6	14	0.049	3.4	8.3	1.4	1	23	815	838	815	838	0.98
7	14	0.33	23	5.7	1.5	2	23	875	896	874	897	0.92
8	14	0.0033	0.23	12.0	0.4	1	23	918	941	918	941	0.97
9	14	0.011	0.75	10.4	0.9	1	23	1159	1182	1159	1182	0.91
10	14	0.0033	0.23	12.0	3.4	1	23	1195	1217	1195	1217	0.98
11	14	0.00018	0.012	16.0	0.2	2	23	1223	1245	1222	1245	0.95
12	14	0.00047	0.032	14.7	3.8	2	23	1256	1280	1255	1280	0.90
13	14	0.046	3.2	8.4	0.3	1	23	1285	1307	1285	1307	0.96
14	14	0.02	1.4	9.6	1.2	1	23	1313	1336	1313	1336	0.96

Sequence Information

Coding Sequence: ATGGCGAGAAAGCGAGTGAAAACATTTGACATGGAAGTGGATTATAAATTTGCGTGTCGCTGTTGCCTTAAGTCAGAGGCAGACTTCAAAAAGCTGGACTCCCTGACGGAGAGTGTCATAGGTTGCGACGAGTCCGCAACAAAAGTACCACTTATACGTTTGTTATTATTCTGTTGTATGCACACTGAAAATCTACCCGAGTTGCCACAATACATATGCGTGGAATGCAGCAAGAGCttgcaaattgcatatttttttataaaaaacagtCTCAGAGCACATGAAATACTGTGTCGCAAACTGTGCCCAAAGAATATTAAGGGAACAACGCGTCTAAATGGGAAACAACTCTTTGAGGCACACCGAGACGACGCGGCGGTCGACGTGCCGCTGGCAATGAAGCCTATTAAGTCCGCCGTGCGCCACGAGTGCAAAGTATGTGGTGCTATCATCTATAATCGAATGGAACTCAAGCAACATATTCGCATGCATAAAGAGGAGCCGGGACACGCGTGCAAGATATGCAAAATTGAGACGCTTAAACAACGCCAGATACCAGAACATTATCGAAAAGTACATGGCCTAACGGCTGCACAAATTGATCAGCAACTTAAAATCAGAAGGTCTATGCAGGCTGCGGCTGCGGCTACtgctacaaatacaaattcagcTGCAAAAACTGATCTGCAAACGCAGGATGAAGTGAAGGTGTGTACTTTGGAAGACATGGAGATGCTGATACCTACTGTGCTAACGCCGGAGGATTTTTCACACCCTCAACTAGATGCTGAGCAACTGCGCGATATTGAGCAACAGTTGGCTAACTCTTTGGCTGTTGGCCAGCCAAAGTCTCAGTCAGGCTTTAGCTCCGTTGTCGCGCAGATCGAACCGACTATATCAACGGGAAACTCGGTAACTGGTAACGTGAGCATAGGCGCAGAGTTTCTGGTCATGCCCGATGGCTCGTTGCAGCAAGTCAATGATGGCGGTGTTGTTTTCGAGTATATTGATGACAGCAAAAGTACGACGGCGCCCACCAACATAAGTCTGCAAAACTTATTGGAAGACTCCAATCCAGAATTGTGCTATAATGCAATGGACATTGATGTTAACCACCTGGTAGAGGAAACACTGCCACAGATAACTGTAAAGCCACCCCCAAGACCAGGCCCAGGATCAATTGCTGCCCTAAAACACAAATGTAAACTGTGCACCAAAGCATTTCCAACTGTAGCACGACTTAAATCTCATCAGTTAACACACAGCAATTTGCCCAAATTTTATTGTGATCAGTGTTCCTACTACTCGCTGCGCAGCGTTGATCTCATCCAGCATTACAAGGAGGAGCACAAAACTATattaagtgaaaataaaaatcaccTAGCTAAATCACCGCAATCACTGTCGCTGTCGACAGACAGGAGCCGTATATATTCCTGTGACATGTGCTTGTTTGAGACACCGACCAGCACCCAGCTACGAAAGCACTATAGCAATAAACATTTGATACAGCCCACTGAGATTCAATTGCGTCCCAGCTGGAACAACGAGTCTTCGGAGAAGTCTACCAGCTTGACGCTAGTCAGCGGGAGTGACCAACATCAGCTGAAAAATTCACAGCCTGCAATACCATATATTCCAATGGGTATTAAATATCCGccaacaacatttgttgccACAGCTGAATCAAATGAGCCGGCcgacacaacaacagcgatgGAGCTACATCAAccacagccaacaacaacagctgtggTAACTCCTGCTGGTGACATAAATGTGGTCATGGATGCAACGTCGTTGTTCTAtgcaacaacttcaacaaccGGGGAAGCAACAGGATCAACAAGAGTAACAGATGCAGGTGCTGCAACGGAGTCAAAAGATTTTACAATATTCCCAGAGAAATCTTTTACCAAAagcatcacaacaacaacagaaacaacaactctGACGGGAATACTCCCTGATGtaaatgttgctgcttcttctgctgctgctgtcgcttcCACTGCAATTCCTAACTCCAACATCTTTGGAGATATGCAAGATTTTATTGATGACACCGATGTGGCAGCTATTTGTACAATACCCGCCGACGATATGCCTGTTGTCGATGGCGATGATATTGTTATAGATAACAATAACATGAGCCTGGATTTCGATACTGAGAATCTATTTGAAGACTTTGACGAAGATGTTGAAGTTGGCGAAGATGATGACGAGGATGAGGAAGATGCCGAAAATGATGATGAGAATGACAATAATGATGCGGCAGCCGatcaaaatttgttgcttaCCAGCGATGATGACGACGTCGATGACTTTGATGACGAACAATCGAAGCATCTACAGAAGCCATATTGCATCtattgcaacaaaaaatttaccaGTCAATACAAGTTCGAGAATCATATGTTCATTCATCGCGGATTGGCGCCATATCGCTGTGAGCTATGCACGAATCTGTACAATATGAAACGCCTGCTTATACGCCACTACAAAACGGTGCACAAGCGAATGCCTACTCGGGACATGGTGCAGGCCAAGGGCGACAAGGTATTAGTAGAGCGTACCACCATCGAAAAACTGAAGATCAATGTAGAGAAGCCTCCTATGCTAATGTGTGCTAAATGTCCATTTGAATGCGAGCAGGAGGGTGAGATGCGTAAGCATCTAAATGCGCATCATGGCATTAATGATGGCGtCTCTGTGCACGCTAATGAGGTGTTTATCATTCGGAAATTGCCTTTTGAGTGTCCACGCTGCATTCGAACATTTGCGGCAAAGGGCACGCTGACTCGCCATTTGCAACGAAGTCATTTAGTAGACACAATCATTGAGATGCAGGCGCCTCAATTGTCAACGAGctcagtggcaacaacagccacattGACAAGTTCAGCCACACTGCCGAAGAATGCTAGTGACACCAAAGTAATCTCAATGCAGCAGGAGACCACCACTTTGATGGATGCTTTGCATCGTGAATTTGACAATGCAGCtagcgatggcgatggcgatggcaatGCGAATGGAAAATGCGACAGCGTGATAAACAGTGACACAGGTATAGAGACGGACAATGAAGATACAGAAATAAAACCATTAATGCAAATATCAGAAACAACAGTTACACAAGAGAATATGAcaactgaaacaaaaacagatgATGATTCCCCTGAAGTTgtaaattcaacaacaacaacaacaccatcgaCGTCAACGctatcaacaacaaacaaaacaccaaCGACAGTGACAACAGTAGACTCTTTACTCGATCCAACTCCTACGccatttgattttgatatgGATTTCATTGGGAATGAATCACATTCCGCTTCGCCTAAAAACTGTATATCAGAATCAGGCCCAAGTCAATTGTTAAACGGCAGCGACAAGCTACTGACAGCTGCGTTAGAGCCATCACCAGTTAAAGACTTACGTCCAAAATTGCCCAATACACCCATTTTTGTATGCAAGCAATGTAACCGGACATTTGACGAATTGGGTAAATTGTTGCAACACGAATCGCAGAAACATTCCAGCGAGAGTGTCTCTCCCCGCAGCATTTATCAGCATCAGTGCAACATATGTAGCAGCTCATATCGAACAGTAACGCTGCTGAATTATCACATGAAAAGGCATGCCCTTCGCAAAGTTCAATGTAAGCAGTGCCCCAAGGAGTTTACGTCCAATTCGGAGATGGAGGAGCACGTAGAGTCGGAACATGGTAATGACAATGGAACAAAAGTACCCATGAAATGTGGAATCGACGGTTGTAATAAGACATTCAATTACAAACATCATCTGAAGCGTCATCAGACAGCTTCCCATACCCCTGTTCGGTATATATGTTCCGAGTGCGGACGCGAAATGTTGACTAGTCAACTCCTCAGGAGTCACCTGAGAAGCCACAAGAGCCCACATTCGTACAAATGCCCTAAGTGTGTGCGAACTTATATGACACGCAAGCCTTTTCGAAGTCACGCGCTGCGTGAACACAAGTGGGATCCGACTGATGACGAATTggacaaaatattttttgttaatgaaaCACTACTGAAAGCTGAAAATAAGCGGTCTGAGCCACTTGACACATCCAGTTGA
Protein Sequence: MARKRVKTFDMEVDYKFACRCCLKSEADFKKLDSLTESVIGCDESATKVPLIRLLLFCCMHTENLPELPQYICVECSKSLQIAYFFIKNSLRAHEILCRKLCPKNIKGTTRLNGKQLFEAHRDDAAVDVPLAMKPIKSAVRHECKVCGAIIYNRMELKQHIRMHKEEPGHACKICKIETLKQRQIPEHYRKVHGLTAAQIDQQLKIRRSMQAAAAATATNTNSAAKTDLQTQDEVKVCTLEDMEMLIPTVLTPEDFSHPQLDAEQLRDIEQQLANSLAVGQPKSQSGFSSVVAQIEPTISTGNSVTGNVSIGAEFLVMPDGSLQQVNDGGVVFEYIDDSKSTTAPTNISLQNLLEDSNPELCYNAMDIDVNHLVEETLPQITVKPPPRPGPGSIAALKHKCKLCTKAFPTVARLKSHQLTHSNLPKFYCDQCSYYSLRSVDLIQHYKEEHKTILSENKNHLAKSPQSLSLSTDRSRIYSCDMCLFETPTSTQLRKHYSNKHLIQPTEIQLRPSWNNESSEKSTSLTLVSGSDQHQLKNSQPAIPYIPMGIKYPPTTFVATAESNEPADTTTAMELHQPQPTTTAVVTPAGDINVVMDATSLFYATTSTTGEATGSTRVTDAGAATESKDFTIFPEKSFTKSITTTTETTTLTGILPDVNVAASSAAAVASTAIPNSNIFGDMQDFIDDTDVAAICTIPADDMPVVDGDDIVIDNNNMSLDFDTENLFEDFDEDVEVGEDDDEDEEDAENDDENDNNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFIHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVLVERTTIEKLKINVEKPPMLMCAKCPFECEQEGEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRTFAAKGTLTRHLQRSHLVDTIIEMQAPQLSTSSVATTATLTSSATLPKNASDTKVISMQQETTTLMDALHREFDNAASDGDGDGNANGKCDSVINSDTGIETDNEDTEIKPLMQISETTVTQENMTTETKTDDDSPEVVNSTTTTTPSTSTLSTTNKTPTTVTTVDSLLDPTPTPFDFDMDFIGNESHSASPKNCISESGPSQLLNGSDKLLTAALEPSPVKDLRPKLPNTPIFVCKQCNRTFDELGKLLQHESQKHSSESVSPRSIYQHQCNICSSSYRTVTLLNYHMKRHALRKVQCKQCPKEFTSNSEMEEHVESEHGNDNGTKVPMKCGIDGCNKTFNYKHHLKRHQTASHTPVRYICSECGREMLTSQLLRSHLRSHKSPHSYKCPKCVRTYMTRKPFRSHALREHKWDPTDDELDKIFFVNETLLKAENKRSEPLDTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00608689; iTF_00558163;
90% Identity: iTF_00558163; iTF_00608689;
80% Identity: -