Dput003222.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila putrida
Gene Symbol
-
Assembly
GCA_037043535.1
Location
JBAMBI010000137.1:5903146-5906081[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 5.9 4.1e+02 1.8 0.2 1 23 217 240 217 240 0.94
2 9 0.41 28 5.5 0.1 2 23 305 327 304 327 0.92
3 9 0.0025 0.17 12.4 5.5 1 23 607 629 607 629 0.97
4 9 0.0011 0.074 13.6 1.4 1 23 635 657 635 657 0.97
5 9 0.0011 0.079 13.5 0.6 1 23 663 685 663 685 0.99
6 9 3.7e-07 2.5e-05 24.5 0.1 1 23 691 713 691 713 0.99
7 9 2.6e-06 0.00018 21.8 0.4 1 23 719 741 719 741 0.99
8 9 1.1e-06 7.7e-05 22.9 1.3 2 23 748 769 747 769 0.97
9 9 6e-05 0.0041 17.5 1.5 1 23 775 798 775 798 0.97

Sequence Information

Coding Sequence
ATGTTAAAAATGACAAATGTGCCGATGCCGACAATGCTTAAGCTAGGCAGCagtcgcaacaacaacagcgcagcagcagcagcaacaacaaaaaagacacagcataataataatggagTAGCAGCCGTCGCAGCTGCGTCGCTGCGCTGCGCAACAGACGACACGGACGAATCCGATGAGGATTCTGAGTCTGAGCTAGACATTGAAGAGGAAGACATTTTGCTGGATGATgcagatgatgatgttgtgTTGCAAATTGACAGCGAGGATGAAGCCGAGTTGGAGGCGCAGCGCATACGATTGGATGATTTAAAGGCAGCGGCCGCAGCAAAGTCGCAGGTCAGTAACGGTAAAGAGGCGACCACAGcgacgcagcagcaacagaagcagcagcaaccgctGCCAACGTCGCGAAAGCCGCGTGGGCGGCCACCCGGCAGCAcgaataaaaacaacagcaaaaaccagagaaataaaaacaaacgtAAAAAATCAAACAGCCCCTGCGTCAGCGCAAGCGTCGCAGTCACAACTGTAACCGTCCCCGTTCCAGTTCCCGTACCCGTTGCTGTTGCGGTCTCTGTACCCACCCCCTctccaattgttgttgctcaaatACACGCGGATGAGAAGGCGCATCGTTTCATATACAGCTGCGTCAGCTGCTCTCTGCTTTACGGGGATGCAGCAGCGCTCTCCCAGCACTGGCACAAagagcatcagcagcagcagcttcagcaggtggaggagagagagaacaaaCGGATTAAAAGCAAAACGCCATCTGGAGAGCAAGTGAAGTTAGAACCACCGTTAGAACTGACCGATGGCATCAAATTGAGCGACTTGAAATGTTGCGCTCAACTGCTGCTCCTAGCGTTGGCAGGGGAGGAATCCTCCAAGCAGCAACTTCGCTGTTCCGCCTGCAGTGCATCCTTTGAACAGATCAAGGGATTGCAATTGCATCTGAGTGAGATACATGGCATCTTTAAGCTGCTCGTGCCGAAAAAGGAACCCTGCGAACCCATGGTTATCATACCCTGTGAAATGGGTGTGAGCAAGTCCAATTTAATACAGGCTTTAGAGTTGCCAGAGACTCCGCCACCAGAAAAGGATACGACCGAAAAAGATGATCTCGCAATGATAAGCGCCATGGTGGCGGAAATTGCAGCTGAACGCAGTCCTAAGGTCAACAAGATGATCATTAAATTGCCGGTGATAAAGCGTGCAGGACGCAAGCGCAAAAAGGCAGAGCAACCAAAGCAGGAGAAGGAACTGGAGAAGGAACAGGAGAAGGAGCAGGAGAATGAAAGCCAAGCCGAAGTCAGCAATGCTAAAAGGAAACGAACACGAAAGGTGCAAAAGGCACAAAAGGTGAACGAAAAGCAGCTTGAAAAGGAGAAGGTGGAAGAAAAACAGCCAGAAAAGCAGAAGATGGAAGAAAAACAGTCAGAAAAGCAGAAGGTGGAAGAAAAACATCAGGAAAAAGAGAAGGAACTTGTAAAGCAGCCAGAAAAGGAGAAGGAAGATAAACAGCAGGAAAAAGATGCAAATAATCAGGAGGAAAAACAGCCGGAGAAGGAGGAAGAAAAGCCAGAGATCAAAGAAGAATTAGAACCACGACGTGCACGCAAAGCACGCAGCTTTGTGGATTACGTGGTCGATATTAAGGATGAGGAGGACGATGATGAAGAGGAAGATAAAGACACCGACTCGGACGTTGAGACGCCACACAACAGTTCCACAGATGATAGCCATGCAGCTGCCTCCATCAAACGCGAATCCTCTGAAGAATCGCAACGTCAAGGAGGAACCATTCACACCTGTAACTTTTGCAGTAAAACCTTTCAACGTTTCTCCCGACTGCAGGATCATCTTCGTTTGCACACGGGCGAGAAGCCGCATGTTTGTGGCCAATGTGGGCGCGCCTTTCGCCTGAAGATGCGTCTTACGGAGCATCAGCTGCGCCATCGCACCGAAAAGGCATACAAATGTGAACTCTGCGGCTTGCCGTTGGCCACCAAACAGGACATGTCGCTGCACATGCGTCATCACAAGAACGATCGGCGTTACAAGTGCGATCGTTGTGGCAAGGGATTCGTGCGCAGCTCCGATCTGGCCATACATGTGCGCGTCCATACGGGAGAGAAGCCCTACAGCTGTGACCTATGTGGCAAGGCCTTCCGTGCCCGTCAGAATCTCGTTGTGCATCGACGCACACATCTCGGTGACAAGCCCATTCAATGTGAGCAATGCGATAAGCGATTCTCCCGCAAGATCGACATGCGTGTCCATATGCGTCGGCATACAGGTGAGAAACCCTTCAGCTGCAGTTCCTGCCAGCGTGGATATTCTTCACGCGTCAACTTGCAGCGTCATCAGCAGCGGGAACACGGCGGACAAACGTCCAGCGAGTCTCAGCCAGAGCAGCAAGAAGCTGAGGACTCCAAATCAAAGCCCGTGACGCGTCGTCCGCGTCGCGAGAAACTGCAGGAGAAGATTGCCGCCCAGGAGAAGCTGTTGGATGAACTGAAGCGCAGCCTCAGCACACTACCCGACATTGCCGAAGACTCCACAGATACTCCACTGGCTGAGAGCAAGCTCAACATAACCGAGCTGGCCGCAGATGCTGGAGCAGGCTCGGATGcgggtgtgggcgtggccttGGGCGCAGGCTGTGCACAAGTTTCTGTGACAGTTTCCATGCAAGTGGAGCCAGCGAAAGCGGATCATGATGAGGAGATAACTCCGGAGAAGGAGAATGCCCTGTCCAGCGGCTCAACAACGGATGCCGTGTCCAGCAATGGCAAGACAAAGACTAATCGCAAGATAACGAGCTACTTTACGGTCGTTGGTCAGCAGGCGGAAATCTAA
Protein Sequence
MLKMTNVPMPTMLKLGSSRNNNSAAAAATTKKTQHNNNGVAAVAAASLRCATDDTDESDEDSESELDIEEEDILLDDADDDVVLQIDSEDEAELEAQRIRLDDLKAAAAAKSQVSNGKEATTATQQQQKQQQPLPTSRKPRGRPPGSTNKNNSKNQRNKNKRKKSNSPCVSASVAVTTVTVPVPVPVPVAVAVSVPTPSPIVVAQIHADEKAHRFIYSCVSCSLLYGDAAALSQHWHKEHQQQQLQQVEERENKRIKSKTPSGEQVKLEPPLELTDGIKLSDLKCCAQLLLLALAGEESSKQQLRCSACSASFEQIKGLQLHLSEIHGIFKLLVPKKEPCEPMVIIPCEMGVSKSNLIQALELPETPPPEKDTTEKDDLAMISAMVAEIAAERSPKVNKMIIKLPVIKRAGRKRKKAEQPKQEKELEKEQEKEQENESQAEVSNAKRKRTRKVQKAQKVNEKQLEKEKVEEKQPEKQKMEEKQSEKQKVEEKHQEKEKELVKQPEKEKEDKQQEKDANNQEEKQPEKEEEKPEIKEELEPRRARKARSFVDYVVDIKDEEDDDEEEDKDTDSDVETPHNSSTDDSHAAASIKRESSEESQRQGGTIHTCNFCSKTFQRFSRLQDHLRLHTGEKPHVCGQCGRAFRLKMRLTEHQLRHRTEKAYKCELCGLPLATKQDMSLHMRHHKNDRRYKCDRCGKGFVRSSDLAIHVRVHTGEKPYSCDLCGKAFRARQNLVVHRRTHLGDKPIQCEQCDKRFSRKIDMRVHMRRHTGEKPFSCSSCQRGYSSRVNLQRHQQREHGGQTSSESQPEQQEAEDSKSKPVTRRPRREKLQEKIAAQEKLLDELKRSLSTLPDIAEDSTDTPLAESKLNITELAADAGAGSDAGVGVALGAGCAQVSVTVSMQVEPAKADHDEEITPEKENALSSGSTTDAVSSNGKTKTNRKITSYFTVVGQQAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00528999;
90% Identity
iTF_00608628;
80% Identity
-