Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_037043535.1
Location
JBAMBI010000470.1:2600218-2603026[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.24 4.3e+03 -2.6 0.1 67 100 49 66 31 102 0.45
2 5 0.12 2.2e+03 -1.7 0.5 81 111 105 132 59 149 0.53
3 5 0.25 4.5e+03 -2.7 0.5 118 118 140 140 107 190 0.54
4 5 0.37 6.7e+03 -3.2 0.1 27 47 236 256 233 290 0.71
5 5 9.1e-97 1.6e-92 309.3 10.7 3 218 310 514 308 514 0.91

Sequence Information

Coding Sequence
ATGAGGAGCATGTTCCGTCCGATAAAGAAGATTTTTACGTATATTCAAAAGAATGCAAGCAACGGGACAATGTTTGGCAGCACAACAAGCTTAAGCACTGAGAATGATGGCGACGCAAGTGGCAGCAAAAACGCAGCTTCCAAGAAcgaggagaaggagaaacaACTGGAACTGGAAGTGAGACAACAACTGGAAGCAGAACCGGAACCGGAAGATGATGATATTGAACGTCAAATAAAAACTTCAATAATCGATGCCACTAAGGTGCATGcagttaaatcaaaaattatattgccACTGCAAATACAATTAGATGATGAGTTGGCGGATTTTGCACATGAACCCGTAACGCTAACGGATGAGGATGTGGATGATGAAGAGCTCGATGAACAGTATCTAGAACTGGAAAGTTTTCCCAACAATGAGATTATTGTGTTAAGTGATAATGAGCTCAATTCATCACTGGCCTCGGATAACATTTCCGAGGATCCTTTGGCTATTGATGACTTTACACAAGCGCAGGAGGAGGATGACAATGAGGAGGAAGAGATTGAAAATAATGGAGAATTACTTTGGCTTAAGCTGGACACGCCAATAGAGGtggcaaacaataacaacaacaacaatgatattACTGATACTATAACAGCTCCAACACCAGTATCAAATAATATGCCCACAAAGACCAAAGAGGAGGAATTACGCAGTGATGGTGGCTCCGATTCGGGATTGGGCAGTGAACACGATAGACAcaacaccacaacaacaacagcaacatctggaacgacaacaacaactgaagcGTCTCCAACATTGCAGAAACCCTTACGCTCCAATTTAAAGCGTCGTCTGGAGGATGATGACTTATCTCTGGTGCCCGACATGAACAGCAGTTCTTCTTCCTCGTCCAGCTGCCTGAAACGTGTCAAGCGTTCCATCAACTTTGATAGCGTCAAGGTGTATTATTTTCCCCGTCAACAGGGATTCAATTGTGTGCCCACAGCAGGCGGATGCACCCTGGGCATGGGCGCTCGTCATATTGCCTTTAAGACCATGACTCTGGCGGAGCATGCAGCGGAATTAAGACGAGCACATCGCAGCCAAAatcaggagcaacaacaacttcgcATTGGCGGCTCAAGCAGTGATGATAGCGAGGAATCTGAGGAGGATTATCTAAGTGAAGGCAGTGGATCCGATGCTGATGATGGCTCCAATGGCTTTCTGCAGCCGGTGACGCCAAAGCAACGTCGAGCTCTGCTCAAGGCAGCCGGTGTGAGGAAGATCGATGCAAGTGAGAAGATCGATTGCCGGGATATACGTAATTCTCGGGAGGTATGCGGATGTTCGTGTCGAGAGTTTTGTGATCCAGAGACTTGTGCCTGCAGCCAGGCGGGCATCAAGTGTCAAGTGGATCGCGCCATGTTCCCATGTGGTTGCACACGCGAAGCTTGTGGCAACACCGTCGGACGTGTGGAATTTAATCCGACTCGGGTGCGTACCCATTACATTCATACGGTCATGCGTCTGGACATGGAGCAGCGTCAGAGTCAAGGACCTCCTGTTGCGAGTAGCAACAATAGCTTGATCTATGGCAACTCAATTTCCAGCGGAGGCGGCGTCATTTCAccaactgctgctgccaccgcAGTTGCCGCCTCcgcatcctcctcctccacctcgcATTGCTATTTCATGCAGCCGCAGTCGAATTACAGCTCTGGCTATGCCTCGCCAGCTTACACGCCCGAGACGAGTGTCAGCTactaccaacaacagcagcagcaacaacaacagtcgccACAGCAGGCGAGCATCTCCTCGCCTGTCTCCGCCTGTTATCCTCAACTGGATAGTCTCGATTCTGGCTTGTTTGCCAGCGGTAGCAATGCCACGCCCTCGTATGGTGAGCTACTAACGCCCACCTATCATCAAACCCTTGGCTATGGCAGTGCCCAGCTCAACTCGTACACCGGCTATCAGCAGACTGCATCAGCATCTGGAGGCAATGCATCTTCGTACAGTTCGTGTGCTGTGCCATCTGTGCCACCATTTGGTaatgccaccaccaccgcctcgAATGCAACGCAATATCAGCATGTGAATGTATTGGAAACCACCGCATCCTCAATGAACtcgaacagcagcagcaggagcagcataTCCGTAACAGCCAGCAATTGCTCAACAGGATTAGTGCGATTAAGTGGCACAGTTCCAGCTGATTTCATTAGCCTAAACACACCCATTGGAAGTTCGTCGCGTCTCTCGCAGATTAATGATCTGTTGCAGCACAATCGGAATGCCACAGCTTCTTTGGTGGCCGTCTCCGAGTCTCCAGGCTATGCCACTGTgcggagcagcagcagcagtaataGTAACAGCACCATTGATATCGATTCTATTGACACACCGCCCATTGTCGAGGAGACGCAACGCAGTTGCATGACCTTTGAGGAGTTGCCACCGCCTCTGATCAATCCCACGCCCATTGTGGCCGTCGTGGAGCACAATGAacgcaaattgcaattgaattccACTGTGAGTTCAGCACCACAGCCTCGTCAGCCGCTGGAGACAAGTGGCAATCTGGGTGAATCCTAG
Protein Sequence
MRSMFRPIKKIFTYIQKNASNGTMFGSTTSLSTENDGDASGSKNAASKNEEKEKQLELEVRQQLEAEPEPEDDDIERQIKTSIIDATKVHAVKSKIILPLQIQLDDELADFAHEPVTLTDEDVDDEELDEQYLELESFPNNEIIVLSDNELNSSLASDNISEDPLAIDDFTQAQEEDDNEEEEIENNGELLWLKLDTPIEVANNNNNNNDITDTITAPTPVSNNMPTKTKEEELRSDGGSDSGLGSEHDRHNTTTTTATSGTTTTTEASPTLQKPLRSNLKRRLEDDDLSLVPDMNSSSSSSSSCLKRVKRSINFDSVKVYYFPRQQGFNCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRSQNQEQQQLRIGGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGPPVASSNNSLIYGNSISSGGGVISPTAAATAVAASASSSSTSHCYFMQPQSNYSSGYASPAYTPETSVSYYQQQQQQQQQSPQQASISSPVSACYPQLDSLDSGLFASGSNATPSYGELLTPTYHQTLGYGSAQLNSYTGYQQTASASGGNASSYSSCAVPSVPPFGNATTTASNATQYQHVNVLETTASSMNSNSSSRSSISVTASNCSTGLVRLSGTVPADFISLNTPIGSSSRLSQINDLLQHNRNATASLVAVSESPGYATVRSSSSSNSNSTIDIDSIDTPPIVEETQRSCMTFEELPPPLINPTPIVAVVEHNERKLQLNSTVSSAPQPRQPLETSGNLGES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00585186;
90% Identity
iTF_00608431;
80% Identity
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