Basic Information

Gene Symbol
Ubp1
Assembly
GCA_037043535.1
Location
JBAMBI010000472.1:1081945-1093709[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-53 4.6e-49 166.7 0.2 22 190 399 564 378 574 0.88
2 2 6.1e-13 5.5e-09 35.6 1.2 188 222 641 675 634 676 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTTTCGCAAAGTTCCGGCCTCTTGGATTTACAAAGCATCTTTGATCCACAATATTCatcgaaacaacaacaacaacatctaccatcacaacaacaacaacaacaacaacaagaacaacactcATCACGCACATCAacgaaatttgatttaaacatCTTCAACGATTTCGACCAAATGgaattcaacaacaatttgagtCGAAACCATAATCAATATCAGAATAATAACAGTAgcatcaataataataataatagtaataaccACAataccaccaccaacaacaacaacaacaccatatATACGCACCAGACGAACGGTGAAAATCTTAATCAGATCCAAAATCGTCATTTTATTAGCGGCTATCATCACCAGCATATTGGATCGGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGAACTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGAATCACCAGGACCCCAGATAATCGACGTTAGGACAATTTactccaacagcaacagttctCGCAAAAGACGAATGGATTGGGACTCATTAGATATCGGTCAAAGTGAAAATTCGCCGACAACACAAACTGGCGATCTACCCAATAAGGCGACACATCTCGACAAAGATAAACACAAGCGTGAAAAGCATTCAGGTCGCAGCAGCTGGAGCGACGATATAGGCTTCGATCTGAACGCAGAGTTTAATAGCAACTCGTATTTAAACAATGAGAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTGAAACAGGAGCCGCAAACGGAGCAGCTCAAACCGAATCCAAAGGAAGGCAACAATTCCGCGGCCGTGATCAATATTGCCAAGATTGATAAGTCGCCATTGGGTGACGCCAATCATTCACCACAGCGTGGAGGACATTCACAAGAGCCAGGAGGCGGAGGTCGAGGAGGAAGTGGCAACAAGCATGAGTTGAACTCTGGCAACCACAATTGTGGTTGTGGCTCGCCGCAAGGCTCGCCCGCCTCAACGGATTTTGAACTGAATGGCAATTCCAATGGAAATGTAGCTGACACTGGCAAatctacagctacagctacaggcAACGAGGCCTATGCCCAGGCGACACGCTCTggattgcagcagcagcagctgaacGTTGTCGAGGAGGCTAAAATAGAGCCAAGCTCCTCTGGCAGTGCAGCCCATGGAGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCGACCAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattggAGATTTATCTTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGTTTGCAGTTTATGGAACGGGAGCAGATGCAACAATGGCAAGCATCGCGTCCTGGCGATCGTATCATTGAAGTGGATGTGCCACTTTCCTACGGTTTGTGCCACGTGTCGCAGCCATTGAGTTCGAGTTCATTGAATACTGTTGAGATATTTTGGGATCCATTGAAGGAAGTCGGTGTTTACATCAAGGTCAATTGCATATCAACTGAATTTACACCAAAGAAGCACGGCGGCGAAAAGGGTGTTCCATTTCGACTACAAATTGAAActtatattgaaaatacacagacaacaacagcagcagcaggagtatctgcagcagcagcagcacacagtggcaacaacagcagctcgagcagcagcagcagtagcaacagcagcaacagcaatacaaCAActaccaataacaacaacggcaacaacaccaTAGCAATCACATCGCCAGGCACTCCCGATAATCGTACAGCGGGCagcggcaatggcaatggcagcagcggcaacaactcCGGACTTGCCACACTCAACGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTATTCAAGCTAAAGGGCGCCGATCGCAAGCACAAACAAGATCGCGAAAAGATTCACAAGCGTCCACAGTGCGAACAGGAGAAGTTCCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATAACgccaacaaccacaacaactggCTGCTATAGTCCCGAATATATGAAATTGTGGCCTAATTCGCCGGTGCATATACCAAAATATGATGGAATGCTGCCATTTACAGCCAACGCATCACCGGCGACCAGTCCAATTGCCATCAATTCAGTGACATCAACGAATTCACCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCAGCATGTGCCAGCGGATATGGATgattatAATCAAAACATAATGCCGGAATCAACGCCCGCACAAGTGACACAATGGCTGACCAACCATCGTCTGACGGCCTACCTCACTACATTTGCCCACTTCTCCGGAGCTGATATTATGCGCATGTCGAAGGAGGATCTCATTCAAATTTGTGGTCTTGCTGATGGCATACGCATGTATAATATTTTGCGCGCCAAaacaaTTGCACCTCGTCTGACGCTCTATGCCAGCATGGATGGTTGTAGCTTCAACGCCATCTATTTGCTCTCCAATACGGCCAAGGAATTGCAACAGAAACTCTACAAGCTGCCTGGATTTTACGAGTTTATGGCCAAGGGTGGATCAGCTGGCGCTTTGGAGAATGGTGtcggtgttgctgctgcactcTACAACAGCAATTGGGGCATGCATTCAAAGTACTCGGGCAGCGGCTCGAACATATACAATGAGGTCAACAAGAGTTGTGTCTACATTTCGGGCCCATCGGGCGTTCATGTTAGCGTTACCGATGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTCTATGCTCTGGATGTGCAGGGCGGCAaagttgttttgaaattgatcAATAAGCAAGATAACTGA
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSSKQQQQHLPSQQQQQQQQEQHSSRTSTKFDLNIFNDFDQMEFNNNLSRNHNQYQNNNSSINNNNNSNNHNTTTNNNNNTIYTHQTNGENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKESPGPQIIDVRTIYSNSNSSRKRRMDWDSLDIGQSENSPTTQTGDLPNKATHLDKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNPKEGNNSAAVINIAKIDKSPLGDANHSPQRGGHSQEPGGGGRGGSGNKHELNSGNHNCGCGSPQGSPASTDFELNGNSNGNVADTGKSTATATGNEAYAQATRSGLQQQQLNVVEEAKIEPSSSGSAAHGEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTQTTTAAAGVSAAAAAHSGNNSSSSSSSSSNSSNSNTTTTNNNNGNNTIAITSPGTPDNRTAGSGNGNGSSGNNSGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIHKRPQCEQEKFQPSYECTIMNDISLDLITPTTTTTGCYSPEYMKLWPNSPVHIPKYDGMLPFTANASPATSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTNHRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMYNILRAKTIAPRLTLYASMDGCSFNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSAGALENGVGVAAALYNSNWGMHSKYSGSGSNIYNEVNKSCVYISGPSGVHVSVTDEVLNNEIKDGSLYALDVQGGKVVLKLINKQDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
-
80% Identity
-