Dpul009532.1
Basic Information
- Insect
- Drosophila pullipes
- Gene Symbol
- -
- Assembly
- GCA_035043795.1
- Location
- JAWNMT010000643.1:2141654-2149338[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00089 0.056 13.8 2.0 1 23 864 886 864 886 0.98 2 8 0.00024 0.015 15.6 1.3 1 23 918 940 918 940 0.97 3 8 1.3 83 3.8 0.4 1 19 947 964 947 970 0.85 4 8 0.0035 0.22 11.9 0.0 3 23 977 998 976 998 0.96 5 8 0.00016 0.01 16.1 1.7 1 23 1004 1026 1004 1026 0.97 6 8 0.027 1.7 9.1 0.2 1 23 1033 1056 1033 1056 0.95 7 8 0.00037 0.024 15.0 2.2 2 20 1063 1081 1062 1084 0.91 8 8 0.28 18 5.9 10.7 1 23 1090 1113 1090 1113 0.96
Sequence Information
- Coding Sequence
- ATGGCAACAATGTGGAATGGGGAAAAAGTGGATCAGTCAGTGAATCTACTGGACAGTCTGAACGCAGCGTCGCGGTGCGATGCAATTAAGTTTCTGCTGCAAACGCTTAAGTGCAAATATCCAGAGACCTGCGACAGAGTCGTCAGGAGTCTGTACGTTAACAGTAGTCACAACAAGCCGACGACTGACAATGGCGCCGGTGCGGAAGTGGAGGTGGATGAGGAGCAGAAGGAGAAGGTCGGTGTGCAGCTAGCGAAGAGcgaacagttgcagctgctgcttgctgccacCGCCATGAAGAAGGAGAAGACGGAACCGGGCACTGGAATCGGGGTTGTGAAAATCAAGCTAGAGAACGAGGATGAAGCATCCGCGATCGATTTAAATCAAAACTTTGAGAAAATTCTCTGCAAGGAGGAGTTTATGTGCCTCGACGAGGAGGATGATTTCCTCGATAATGATGTggccgatgctgatgctgatgccgatgccgacgCGGATGTCGACACCGAAGAGAACTCATCTTCCATTGGTAAACATGGACTGCATCACTATCatcgcaacaacaatgtgaatGCCGGAATTGACGGACGACGAGGTGCTGGCCAAGCTCTTCTAAACACCAGTGATGATCCACTCGATCTGATACACACGGTGAAGCGAAGTTATGCGGCGACATTCGCTGATGATGACGaagacgacgatgacgaggagGAGCACGAGCAGGCGGCGGAGCACGAGGCGGATGAGCTGCTCTCGGTGCGACGTCAACAAAAGCTAGCGAAACGAaagcgcagcaacaacagcaatcacatTAGCAAcagtagctgcagcagcaacagcagcaatatcatCTCACCATCTGTCCACCTGCTGTCCACACGTTCCACACGTCTTGGCGATGGCTATGTGTTCCACGAGGACAACCAATACACTTTGCGCTATCATCACAGCAGCGGCGAGTTCAGCGAACGGGCATTCAAGGCACAGTTTCGCCTGCTGTTGCGTCTGGCGCTGAGTCAGCATCACAAGCCGTTCCTTAAGCAGTTCTATGAGAATTTTGTGATCACTGGCCGGTTGCTGGGCACCACGCCCTCCACACGGGTGCTAAAGGAGCTCCGCGAACAGCGCCTGGATGAGTGGCGACGGCAACGTGAACGCAAACTGTTGGCGAAAACTGTTGCcgaggcagctgcagctgcagcagcagaggaagcggccgcagcagcagcagcaaaggaaacggcagcagcaacagttgctgcccGTCTAGCGctggaacagcagcaggagcagcagcagcagcagctgctggagctggaaaagcaaaagcacacccagcatcagcagcagcagcagcagttggaacAGCAATTGGATGTGGCAGTGTCACCGTTGCAACTGCAGCCAGATCATCAGCTGAGATCCATTTCGTTTGGTGACTCTGAGCTGGAGTCAGAAACGGAATCGCAGCTATCGTCAGCGGCGCAGGAGATTATGAAGTTTGAGGAGTTCATTGATGATGGTGTAGGCGCAGGTCGTCTCATCGATGGGCTCGAAATGGAGCCGGAAATAGATGAGATGATGCTGGCGGGTGCCGGTGGCAGCGCCGGCGACGTCGGTGACGGCGCCGGCAGTGGATTGGGCAGCGTAACGGGCACCTGCAGCGGCAGCGggaacagcaatagcaacagcagcgccgtTCATGACAACGGCATCGCCTCCCTCCTCATGGACACCAGCCATGGGCAGCAGCTTCATTCGCACCATCTcagcagcaacagcaacagtagtgGTGGAAATCTTGTGATCAATGGCCTTACGTCAAGCAAtatgcacagcaacaacattaattgtaacaagagcaacaatgcGCTCAatccacagcagcaactggcgCCTGACCATCTCTCGAAGCAGTCCGGGCCGCATACGGATCGGGATCGAGAACGGGATCATCAGGCGCAGATGCAGCCACAATCGCAACAATTATCGATGCCACCAATGAGGAGCGGATATGGCATCGATGGCGTTGCGATGTCGGCGACAACACAGCTGATGGCTGGCACTGAGATTCAGCTGCAGAACGAATCGCAGAACCAGACTCAGAATCAGAACCAGAATCATTACAATTCAAGCAATAATCCGCTCTCAATGCCGCCCATCATTGAGCAAAtgatgcaaatgcaaatgcatcatgagcagcagcagcaacagagccCATTTCCCCAGCATCAGCATGCCCAGCTGATGAACAATCGTCAGTCGCATCtgcatccgcatccacatccgcatccccATCCACATCCCCAGTCACATCCAcactcgcagtcgcagccaaCGACGCATTTGGGTGCAGCGGGGAGCATCGGTGGATCATCGCAGCTGAACTCATCGCTGGAGCTGGACGACAATGAGTTGTCCGGCGAGGAGGATGACGATGACCTGGACAATGAGATTGACGAGCTGGATGCGGCCAAGCAGCAGCTCATCgatggcggcagcagcagcagcacctccCTGCAAGCGCCACCCTCCCAGCTCGGCGGCAGCCATACGCCCGGAGGCAGTAAAAAGGACAAGCCCAGCTATAATTGTCTGCTGTGCCCCAAGTCATATCGGAAGCGCAAATCGCTGCTGGATCACTACAAGATGCATCCCGGCTACTGTCACGACTGTGGCCAGCCCAATGGCAACACCCTGGAGGAGATAATTCAGCACAATCGGACAATGCATGTGAAGGAGTTTCCGTTTGTGTGCGAGACCTGCGGCGAATCCTATTCGCGTCGACAGCAGTTCCATGCCCATGTGGAGTCGCACAAGAAGGATTTCAAAATCTTTCCGTGCGGCGAGTGCGGCCTGAAGTTGTCGCAgaagaagctgcagcagcactttGAGGAGACCGGCCACAAGGCTGATGGCGCCATCTGCGAGGTTTGCGGCGCTGAATTCCCCTCGAAGAATGCCCTCTATCAGCACATCATACGGGTGCACAAGCGTGACAATTTCTTTGAGTGCCACATTTGCCAGAATCGTTTCACGCTCAAGGCCAATCTGGAGCGGCATGTGCAGCTGCACACGGAGGTGAAGCGCACGTATGTGTGCGATATGTGCGGCTCCTCCTATTTTACATATCCCGCACTCAAGGAGCACTACAGCAACGCCCACGTCGATGTCTCCGAGTGCAAGTGCACCCTATGTGGCAAGAGATTCGGCTCGGCCAAGTCACTGCAACGCCATTTGCCATCGCACTCGGAGGAGCGGCCGCATTGCTGCAATCACTGCGATCAGACTTTCAAGTGGAAGACGCATTTGGTGCGTCACAAACAGACAATGCATGGGAATCAGCCGCCGCCACCCAAAAAGGGCAAACAGCGTTTCCCCAAGGCCAACGAAGAGGATATGTTGCCACTGCCTGATATGCCAGGGCCGCCGCCGGTGAAGGCTAGCAAAAAGTCAGCGGTCAGCAAGGCAAAGTCACAAGCAGGTacggcagctgcagccgctatacagcagcagcagcagcagcaacaacagcagcagcaacagcagatgcAGTCGGGCGTTGGGAAGGGTGGTAGTGTGGGTGCCACGCCAACACCGCCGCCACCATTGTCGACGACGCCGGGCTGCTCGCAGCAGGATCCGTTCAATGCCGCCATTGTGAGCAGCAACAGTTCGCAATCATCGACGGCATCCACGTCACAGCACTCGGTCTCCACGAGCGAATCTCAGCAGAATTCCATGTACAATCAGAGCTTTAGTGCGGacaagttgcaacagcagcagcagcagcctccgacgcagcaacaacagcagcagcagcagcagcaaaatgcgttgcatcaacatcagcagcagcagcagcaacatgcggCAGCAACGCCACCAccaacgcaacagcaacaacaacagcaagcgtTGCCCactgcacagcagcaacagcagcagccgccgcatcATCGCCATACGCCGCATACGCCGAACAACAGCACGCCGGAACTGCATCTGCAACGGATGAACAGCTTTGGTGGGCCGGAGAGCCAGTTTCACTTTGAGCCCACCGGCAATCCAGCTGTCGGctatcagcagcatcaggTCTTGAATCagtatcaacagcaacaacaacagcagcagcagcaagcgcaacaaccgcaacaacaacagcagccgccgcagccacagccaccgcagcagcagcaacagcatatGCGCAGCCACACGCCACAGAgtccacatccgcatccacatccacatgcGCATGCACATCCGCATCAGgcacagcagttgcaacagcagcagcaacagcaacactttaGCTCGCCGCATCACATGCCACCAATGCATCACCAGcatcagttgctgttgcagcagcatcgTCACAGTCATTCGCCGCAGCATCCGCAACACTCACGCTTGCAATCTCCACAGCCACAGCCGTCGCCATCGCCCGCTGCGTcagcaacacaacagcaattcttgcaacagcagcagcagcagcaacaacaacaacagcaagcgaCTGACTCATGGGGCAACATGGGCTTTGGCGGGGCACCAAATACGCAGCCGGTCGAGCTGAAGGACAACAAGTTCTACATTGTTGACTCAACCGAGTTTCTCGGGCTTCCAATGAACGTGGGCGCAACAGCGCCGCCCACTCAGCAGCaagccgctgttgttgtcggcaacaagccgcagcagcagcagcaacaggcgccACAAGATCCCGCCTTAGCTGGCGATCTATTGGGCTTCCAGCACATGTggccgcagcaacagccgcagcaacaacagcagcagcaacagccgccaacagcagcaccgCAGGTGAATCAAGTGGGGCCGGGAGATCCACACAACTACAATAATATTGGCAGCATTCTGACGAATCTCATCGATACGAATCCCACGCCTTTGGAGTACAACTTTGATTTAATGCCacaatcgcagcagcagcaacaacaaccccagcaacagcagcagcaaccacagcagtcgcagcaacagcaggcggcTCAGCAACATCACAATGCTGGTGCTGCTTACGGTGCTGGTCTAATGCGGCACGGAGTACCAGCGGGCAACGTTTACtacgagcagcaacagcatcacaATCACAACCACAGTGCGCtgagcgagcagcagcagcagcagctagtcAGCGAACAGCAGAAGCACAATAGCTTCCAGCCATATCATCCACATGCGCATCCACAcccgcatccacatccgcatccgcatggactgcaacagcagccgttGCATTCGTTGGCGGGCGCCACACACTtgttgccaccgccaccgccgcatGGCAGCGTCTATGAGCGTACAGCACCACCAgtgggtgtgggtgttggTGGCTATCCCATGCTGGGCGATGATAGCAAGTCTGTGTTGCCGCCAATCAATGACTATATGCATCatatgcagcaacagcagcccgATCTAATCTACTATCCAGTGAAGAACGATTGA
- Protein Sequence
- MATMWNGEKVDQSVNLLDSLNAASRCDAIKFLLQTLKCKYPETCDRVVRSLYVNSSHNKPTTDNGAGAEVEVDEEQKEKVGVQLAKSEQLQLLLAATAMKKEKTEPGTGIGVVKIKLENEDEASAIDLNQNFEKILCKEEFMCLDEEDDFLDNDVADADADADADADVDTEENSSSIGKHGLHHYHRNNNVNAGIDGRRGAGQALLNTSDDPLDLIHTVKRSYAATFADDDEDDDDEEEHEQAAEHEADELLSVRRQQKLAKRKRSNNSNHISNSSCSSNSSNIISPSVHLLSTRSTRLGDGYVFHEDNQYTLRYHHSSGEFSERAFKAQFRLLLRLALSQHHKPFLKQFYENFVITGRLLGTTPSTRVLKELREQRLDEWRRQRERKLLAKTVAEAAAAAAAEEAAAAAAAKETAAATVAARLALEQQQEQQQQQLLELEKQKHTQHQQQQQQLEQQLDVAVSPLQLQPDHQLRSISFGDSELESETESQLSSAAQEIMKFEEFIDDGVGAGRLIDGLEMEPEIDEMMLAGAGGSAGDVGDGAGSGLGSVTGTCSGSGNSNSNSSAVHDNGIASLLMDTSHGQQLHSHHLSSNSNSSGGNLVINGLTSSNMHSNNINCNKSNNALNPQQQLAPDHLSKQSGPHTDRDRERDHQAQMQPQSQQLSMPPMRSGYGIDGVAMSATTQLMAGTEIQLQNESQNQTQNQNQNHYNSSNNPLSMPPIIEQMMQMQMHHEQQQQQSPFPQHQHAQLMNNRQSHLHPHPHPHPHPHPQSHPHSQSQPTTHLGAAGSIGGSSQLNSSLELDDNELSGEEDDDDLDNEIDELDAAKQQLIDGGSSSSTSLQAPPSQLGGSHTPGGSKKDKPSYNCLLCPKSYRKRKSLLDHYKMHPGYCHDCGQPNGNTLEEIIQHNRTMHVKEFPFVCETCGESYSRRQQFHAHVESHKKDFKIFPCGECGLKLSQKKLQQHFEETGHKADGAICEVCGAEFPSKNALYQHIIRVHKRDNFFECHICQNRFTLKANLERHVQLHTEVKRTYVCDMCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNHCDQTFKWKTHLVRHKQTMHGNQPPPPKKGKQRFPKANEEDMLPLPDMPGPPPVKASKKSAVSKAKSQAGTAAAAAIQQQQQQQQQQQQQQMQSGVGKGGSVGATPTPPPPLSTTPGCSQQDPFNAAIVSSNSSQSSTASTSQHSVSTSESQQNSMYNQSFSADKLQQQQQQPPTQQQQQQQQQQNALHQHQQQQQQHAAATPPPTQQQQQQQALPTAQQQQQQPPHHRHTPHTPNNSTPELHLQRMNSFGGPESQFHFEPTGNPAVGYQQHQVLNQYQQQQQQQQQQAQQPQQQQQPPQPQPPQQQQQHMRSHTPQSPHPHPHPHAHAHPHQAQQLQQQQQQQHFSSPHHMPPMHHQHQLLLQQHRHSHSPQHPQHSRLQSPQPQPSPSPAASATQQQFLQQQQQQQQQQQQATDSWGNMGFGGAPNTQPVELKDNKFYIVDSTEFLGLPMNVGATAPPTQQQAAVVVGNKPQQQQQQAPQDPALAGDLLGFQHMWPQQQPQQQQQQQQPPTAAPQVNQVGPGDPHNYNNIGSILTNLIDTNPTPLEYNFDLMPQSQQQQQQPQQQQQQPQQSQQQQAAQQHHNAGAAYGAGLMRHGVPAGNVYYEQQQHHNHNHSALSEQQQQQLVSEQQKHNSFQPYHPHAHPHPHPHPHPHGLQQQPLHSLAGATHLLPPPPPHGSVYERTAPPVGVGVGGYPMLGDDSKSVLPPINDYMHHMQQQQPDLIYYPVKND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00482605;
- 90% Identity
- iTF_00597770;
- 80% Identity
- -