Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035043795.1
Location
JAWNMT010000135.1:350432-362695[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.012 96 2.0 4.4 92 137 26 70 14 114 0.77
2 3 2.9e-52 2.4e-48 164.2 0.3 19 185 413 576 398 589 0.90
3 3 3.6e-13 2.9e-09 36.4 0.8 188 221 634 667 624 669 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCCGGCCTTTTGGATATAAAAAGCATATTTGATCCACAATATTCattacaacaacatcaacaagaaaatcaacatcagcaacatcaacaacaacagcagcagcaacagcaacttgatTTGccatcacaacaacaacaccaacatcaacaacaacaacattatcaAATATCACACATATCAacgaaatttgatttaagcatTTTCAACGATTTCGAGCAAATggaattcaataataatttgagtCGAAACCATAATCAGTACCagaatagcaataacaataacgataATAACAGTAccatcaacaataataacaacaacaacaacagtgaacATTTAAATCAGGTCCAAAATCGTCATTTCATGAGCGgctatcatcatcagcatatTGGGTCGGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGATTCACCAGGACCGCATATTATCGACGTACGGACAATTTACTCAGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACACAATCGGGCGACATACCCAATAAGGTAGCACATCTCGAGAAAGATAAACATAAACGTGAAAAGCATTCAGGTCGCAGCAGCTGGAGCGACGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAACTTCTTGGCCTTCTCGCCGAGCTTAACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTGAAACCGACTGCAAAGCTACCCTTGGACAACAGCTCTGCGGGGGCTGTGCACAATATTGGCAAGATCGACAAGTCGCCATTGGGCGATGCCAATCATTCACCACAGCGGCCGGTCCAATCCCAGGAAGCGGTTGGCGCTGCAGCAGGAACAGTAACAGCTGctggcaacagtggcagcgAAAACGGTGGCAAGCATGAGTTGAACTCCGCTATTATATGCGGATGTGGCTCACCACAAAGCTCGCCCGCCTCAACGGAATTTGAACTGAAGGACAGTGCCACCAATagaaatgcaactgcaacggacAAAACCATTGCTGCATCTGGCAACGAGGCTTATGCCCAGGCGCCACGCTCTGAGCTGCCGCATCAGGTGAGCGTTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCAGTGGTGCATCACATGCCGAGGATCACAAATTCCAGTACATTTTGGCAGCGGCCACCTCAATTGCGACAAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattgGTGATTTATCATTCTATCGCGATAAGATTTTAAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTGGATGTGCCATTATCGTATGGTTTGTGCCATGTGTCGCAGCCATTGAGTTCGAGTGCACTGAACACGGTGGATATCTTTTGGGATCCATTCAAGGAAGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCGTTTCGTCTACAAATTGAAACCTATATAGAAAACTCACCAGCAactagcagcaacagtaacaccAGTAGCagcactagcagcagcagcagtggcagcggtgCCAGTGtcaataacaacaccaacagcaacactagCAATAGAAcaaccatcaacaacaacaacaacacattaGGTGGCACATCGGACAGTCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAACAGGATCGGGAAAAAATACAGAAGCGGCCAACATCTGAGCAAGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGATATATCATTGGACCTGATAACGCCAACCACCACAACAGGCTGCTACAGTCCCGAGTATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCGAGCAGCGCATCACCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACATGTGCCAGCAGATATGGAAGACTATaaCCAGAACATAATGCCGGACTCGACACCCGCACAAGTGACACAATGGCTGACCAATCACCGTCTGACGGCCTACTTAGCCACCTTTACTCATTTCTCGGGCGCGGACATTATGCGCATGTCCAAGGAGGATCTTATTCAAATCTGTGGACTTGCCGATGGCATACGTATGTTCAATATTTTACGCGCCAAAACGATTGCCCCACGTCTGACTCTCTATGCGAGCATGGATGGCTACAGCTACAATGCGATCTATTTGCTCTCCAACACGGCCAAGGAGTTGCAGCAGAAGCTGTACAAGTTGCCGGGCTTTTACGAGTTCATGGCGAAGGGCGGATCTGGTGGCGCCTTGGAGAATGGCGGTGttgcagctgcggctgctgctgctgcggcgctCTACAACAATTGGGGCATGCATTCAAAACACTCCGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGCGTGTATATTTCGGGTCCATCGGGCATTCTTGTCAGCGTCACCGACGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTCTATTCCCTGGATGTGCAGGGCGGCAAAGTTGTCTTGAAATTTATCAATAAGCAGGATAACAATTAA
Protein Sequence
MALSFLSQSSGLLDIKSIFDPQYSLQQHQQENQHQQHQQQQQQQQQLDLPSQQQHQHQQQQHYQISHISTKFDLSIFNDFEQMEFNNNLSRNHNQYQNSNNNNDNNSTINNNNNNNNSEHLNQVQNRHFMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQSKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSPTTQSGDIPNKVAHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPSLTALKQEPQTEQLKPTAKLPLDNSSAGAVHNIGKIDKSPLGDANHSPQRPVQSQEAVGAAAGTVTAAGNSGSENGGKHELNSAIICGCGSPQSSPASTEFELKDSATNRNATATDKTIAASGNEAYAQAPRSELPHQVSVVEAAKIEPSSSSGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSALNTVDIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPATSSNSNTSSSTSSSSSGSGASVNNNTNSNTSNRTTINNNNNTLGGTSDSRAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLITPTTTTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMEDYNQNIMPDSTPAQVTQWLTNHRLTAYLATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSGGALENGGVAAAAAAAAALYNNWGMHSKHSGSGSNIFNEVNKSCVYISGPSGILVSVTDEVLNNEIKDGSLYSLDVQGGKVVLKFINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
-