Basic Information

Insect: Drosophila pseudotalamancana
Gene Symbol: -
Assembly: GCA_037075185.1
Location: JBAMCK010000742.1:3765-5363[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.5e-05 0.001 19.4 2.7 1 23 214 237 214 237 0.98

2 8 0.0021 0.15 12.6 0.9 1 20 274 295 274 298 0.94

3 8 9.2e-07 6.4e-05 23.2 0.5 3 23 303 323 301 323 0.97

4 8 0.0037 0.26 11.8 0.2 1 19 329 349 329 351 0.96

5 8 3.9e-05 0.0027 18.0 1.5 2 23 360 381 359 381 0.96

6 8 0.00014 0.0096 16.3 0.5 2 23 388 409 388 409 0.95

7 8 0.00013 0.0089 16.4 0.5 1 23 415 437 415 437 0.96

8 8 3e-08 2.1e-06 27.9 0.5 1 23 443 465 443 465 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.5e-05	0.001	19.4	2.7	1	23	214	237	214	237	0.98
2	8	0.0021	0.15	12.6	0.9	1	20	274	295	274	298	0.94
3	8	9.2e-07	6.4e-05	23.2	0.5	3	23	303	323	301	323	0.97
4	8	0.0037	0.26	11.8	0.2	1	19	329	349	329	351	0.96
5	8	3.9e-05	0.0027	18.0	1.5	2	23	360	381	359	381	0.96
6	8	0.00014	0.0096	16.3	0.5	2	23	388	409	388	409	0.95
7	8	0.00013	0.0089	16.4	0.5	1	23	415	437	415	437	0.96
8	8	3e-08	2.1e-06	27.9	0.5	1	23	443	465	443	465	0.99

Sequence Information

Coding Sequence: ATGATCAAATTGCAGCCTGATTTTGATCgctcatattttaatttccgttGCGGTGAGGTACTCTGCGTTGGACCCACGTCCTACGATGTATGCTGTGCGCTCTGCGGCCAGCAGGTGCCATATGCGGAATTTCCTCAACACTTTCGGCTAAAACATCTTCcggagaaagagacagagacagagacggagacTGAAGACTGCAAACTCTTCGCTGCACATGCAGAGGAACAGCATTTGGACGCTCCAGTGGAGGTGGAGGTCGAGCCGCTGGCTATCAAGTCCGAGGATGATCCTATTGCACATGACGAGACTCACGAGTCTAATGATCATGTGCATGTGGATCTGGCTCAGATAGCGTTGCTTGACCAGGAGCACGAGACTGATAAAGATGCAGATGCTTGTGCTGCATCGGAAGATTTGGAGGATTCAAGCACAATTGCAACCCGGCGCCGTCGGCGAGAAGCTACTTTAAAGAATATTCTTTTAGAACAAACTAAAGCTTCAGAAAACGAAACGGTTGTAGACAAACATATAGAATGGATGGAAGGGGACGGCAGCAATAGTGAGGCACGTCTCGAAGTCAATGAGGAGTCTGCTTCAGAGAACAATGATGAAGACGATGACACCAGGGACATGCTCTTCCAGTGTGACCAATGTGACCGCGCCTATAACACCAAGCGCAGCTTGCAGAGCCATAAGCGTAGCAAACATAATTTTCGGAAGCCGGCAAAGCCTCACAGGATTTCTACAGATACATCAataatagcagcaacagctggaaGCGTCCGAAGAAAGACCCGCAAGGGTCCCGCCAAGATATACAAATGCGACGAGACTGAGTGCAACCAGACGTTTCGTACGGAGCGCGATTTGCGCGGCCATCGGTGGAAGCACACGGGCATTTTCTGCGATATCTGTGGCAAGCCCTTTACTCAGTCCGGCAACATGATGCGCCACCGCCAGCGGCACAGTGGTATCAAGCCCTACAAATGCCAGGAGCCAGACTGCGAAGCCACTTTCTACACCCAAAAAGAGCTAACGTCTCACAACATTTGCCATACCGGACGCATGCCCTGCATATGTGAGGTATGCGGCCGTCCTTGTCGCGATCGCGGCGTCCTCACGGCCCACATGCGGCGTCACACTGGGGAACGGCCGGCGAAGTGTGAAGTTTGTGGCAAGGCCTTCTACAGCTTTCATGATCTTAACGTGCACGCTGTCTCGCATACGAATCTGCGACCCTTTGTCTGTGATGTTTGCGGCTCAACGTTTCAGCGGAAGAAAGCGCTGCGCGTTCATAAGCTGTTGCACTCCGAGCAACGAAAATATTCGTGTAAGCTCTGCAACAAAACGTTTGCCCAATCTGGCGGCCTTAATGCCCACATGCGCACCCACGAGTCGGCTCGCGCCAGGGCGAAAGCTAAGGCCACCGCAGTGACGACGCCGACCGTGGAGCTGGCAACGCCAGTCGAGATCGAGGGCGTTAATACCGAGCAACTATTGGAAGAGGCTGTCACAATTCAGTTGATCCAGGAGGAGCATGCATCCCACGTGaaagttgttgccgttgcagctgcaggcaGCTGGCATGTAACATAA
Protein Sequence: MIKLQPDFDRSYFNFRCGEVLCVGPTSYDVCCALCGQQVPYAEFPQHFRLKHLPEKETETETETEDCKLFAAHAEEQHLDAPVEVEVEPLAIKSEDDPIAHDETHESNDHVHVDLAQIALLDQEHETDKDADACAASEDLEDSSTIATRRRRREATLKNILLEQTKASENETVVDKHIEWMEGDGSNSEARLEVNEESASENNDEDDDTRDMLFQCDQCDRAYNTKRSLQSHKRSKHNFRKPAKPHRISTDTSIIAATAGSVRRKTRKGPAKIYKCDETECNQTFRTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKPYKCQEPDCEATFYTQKELTSHNICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYSCKLCNKTFAQSGGLNAHMRTHESARARAKAKATAVTTPTVELATPVEIEGVNTEQLLEEAVTIQLIQEEHASHVKVVAVAAAGSWHVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512897; iTF_00532533; iTF_00559651; iTF_00520083; iTF_00502687; iTF_00476790; iTF_00572760; iTF_00554555; iTF_00549714; iTF_00473238; iTF_00551763; iTF_00540530; iTF_00516443; iTF_00568416; iTF_00586843;
90% Identity: -
80% Identity: -