Dpse011887.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pseudotalamancana
Gene Symbol
-
Assembly
GCA_037075185.1
Location
JBAMCK010000859.1:41926-46589[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00016 0.011 16.1 0.3 1 23 222 244 222 244 0.98
2 25 0.001 0.07 13.6 1.4 1 23 250 272 250 272 0.98
3 25 0.03 2.1 9.0 0.9 2 23 304 325 303 325 0.97
4 25 0.0075 0.52 10.9 1.9 1 23 402 425 402 425 0.93
5 25 9.1 6.4e+02 1.2 4.0 2 23 436 459 435 459 0.90
6 25 0.1 7 7.3 0.8 1 23 504 526 504 526 0.97
7 25 0.039 2.7 8.6 1.4 3 23 608 629 606 629 0.94
8 25 0.00067 0.047 14.2 0.2 1 21 638 658 638 659 0.94
9 25 0.018 1.3 9.7 6.2 1 23 668 690 668 691 0.96
10 25 0.0005 0.035 14.6 0.4 2 23 721 742 720 742 0.97
11 25 2.4e-05 0.0017 18.7 6.2 1 23 750 772 750 772 0.99
12 25 0.011 0.75 10.4 0.4 1 23 920 943 920 943 0.95
13 25 0.0037 0.26 11.8 1.2 1 22 950 971 950 971 0.96
14 25 0.1 7.3 7.3 0.6 1 23 980 1003 980 1003 0.91
15 25 3.8e-05 0.0027 18.1 3.9 1 23 1027 1049 1027 1049 0.97
16 25 0.00014 0.0095 16.3 0.9 1 23 1056 1078 1056 1078 0.98
17 25 0.018 1.3 9.6 0.0 2 21 1105 1124 1104 1125 0.94
18 25 0.035 2.4 8.8 4.8 1 23 1170 1193 1170 1193 0.96
19 25 0.023 1.6 9.3 0.6 1 23 1230 1253 1230 1253 0.96
20 25 0.014 0.98 10.0 3.1 1 23 1275 1298 1275 1298 0.97
21 25 1.3e-05 0.00093 19.5 0.1 2 23 1326 1347 1325 1347 0.95
22 25 0.00016 0.011 16.2 2.9 1 23 1353 1375 1353 1375 0.99
23 25 3.8e-06 0.00026 21.2 2.0 1 23 1381 1403 1381 1403 0.97
24 25 5.7e-08 4e-06 27.0 2.4 1 23 1409 1431 1409 1431 0.99
25 25 0.00076 0.053 14.0 0.3 1 21 1437 1457 1437 1461 0.92

Sequence Information

Coding Sequence
ATGTTGCCGACGGATATTTGTCGCACATGCGGGATACAGGATGACAGCTTGCTACCGTTAGCAACGCGAACtgataaatatgcaaataaaagctTAAACGACATATTGCACGAATTGACACAAAATGATCCTTTGCAGGAGAATACTGATGACAATCTACCGCAGCATTTGTGTGGTGATTGTTTGCTCAAGCTGGAGTCTGCTTATGCGTTTGTGTTGCAAGCACGTCAGACACAGGAGCaattgttgcaacagttgcgcAAAAGCTTGCAGACAAAGTGTCTGGACGAGATTCCTATAGATATAAACATGCAGCACATAAAAACCGAAACGAATTTTGACTTAGATGGACAACTGAGTAGAAAAACCAAGAGCGAAGATCACGAAGTGGATGTTGAAGAGGAGCCAGATATGGCTACAGTCTCTATTCCAGTCTTAAAATGGCAACCAGAAAGCGATAGTGACGGCGGACAGGTTGCTGTTGATGACCAGGAAGTGGACTTTAAACCCAAGTATTTACGCCGCAGCGCACGTAAAGCCAAACCATTCACTGACAGCGAAAATGAAGCCCTCTCTGCCTATACGAAACCCTTGCCTGTCAAGCGTCCTCGTGGTCGCCCCCCACGTCTGCCCAAAAAGGAAACAATTAACGAGGAGGGTCGTTACGTGTGTGAGGTATGCGGCAAGACATTTTCTTGGTATCGCGATATGCAACGTCATGCCCGCATACACTTCGAGCAGGCGAACTACGTGTGCGACAGTTGCGGCAAGAGTTTCCTACGTAAGGACAAGTACGTGTACCATCTGAGATCGCATGAAAGACGCGCTGCGAAATGGCAGGCCTTGCAGCTAAGTAGCGAATGGCGTTTTGCGGAACGTCTCTATAGTTCGGGTCGACTCAAGCGAGTGCAATGCAAGCTGTGCGGCTTGAAGTGTCAGCGCATAGTGGAGCTGCGCGAGCATCTGTTAAGTCATGCAAGCATTGATACACTATCCAAACTAAGCCTGGAGAGTGATGTTATCAAAGAACAGTATGCCAGCGGGCAGTGGCAGTTGAACTTGGCATTGATCAAGCAACAGGTGTGTGAAGACATTGCCGAAGGACGGGAAAAGCTTGACAAATACTGTGTTGTCGTAAATGCGTATGGCTACGAGCTCTGCTTAAGCGATTCAGACGAAGAGTTAAGCAGTTTATCGCCTCAATATCAGTGTCGGCCATGCAAGTCCACCTTTACACGCAAATATAGTCTCATGCGACACACACTGGAGGAGCATACAAAAAGGGAATCTGATGTGATTTGGCAACGCTGTGATGTTTGTCAAATTGGTTTTGTGTGCAACAAACTGCTGGAACAACATAAACGCTCGCAGTGCCACAATAAACTTAAACGTTACAGCTGCGCCAAATGTCCAGGTAAATTTATCTGGATACAGAATCTGGAACAACATGCATGCTCTCAACGCAGCAAGTTATTAGAGGAGGAGCAGCGGGCAGAGGTGCGGCGTCGCTTCCAATGTTGTCTGTGCGATGCCCAAGTGGACAATATGACACAATTACGCGCTCATTTGCTCCAACACCGCGATGGATACACTGGCATAGATCCGGAGCAGCAGTCTACCTTCTTTATCAGTTACTATCCAGATGGTTTAGACTGTAGCTTGTCGGAGCTGAGTGCACGCATCGCCAACGACTTTGAGTTAGGGGCTTACGAACGCTATTTCAATGCCAGTACAGGCAGCGGCCAGGAATTGGATTTCAATGCCTCGGATACGGATTTAAGTGATGCAGAGAAGCTGATATCTGCCCCTGCGCTTCACTTATGCTCTCTATGTGGTGAGACAAGAAAACGCTTGACTCAACTGCTCGAGCACCAGGAAAGCCAGCACAATGCTTTGGAGACTCCACTGCCGCATCCCTGCGAGGATTGCGACATGAGTTTTGTAGCTGAATCGCTGCTTCAACGGCATCGTCAACGCGTCTGCGCCAAACGACATGTCAACTACCAATGTCAGCAATGCAGTCAGCGTTTTTGCTGGCGATCCAATTATGAGCGGCATTTGCAAATACATCACGATATGCACGGCGAGGCCGACGCAGAGGTTGCCGTGGAAGATGACTCTAGTCTAAGACGCAAGCGGAGAAATACTGGAGCCAGACTGCAGTGCACTGAGTGCGAAAAGGTCTTCATTTGGCCCAAGGATCTTACTCGTCACAAACGCTTGCATCAGCCACAGGCTTTAGCACAATTCCAATGCTCACACTGTGAGCGGAAATTCCATCGTAAGGATGGACTGAAGTCGCATATGCGAGTCCATGGCGAACAGCAACATGATTTAACAGTTACCAGTGAACAAGTTGCATCGATGGTGCAGCGTATGCCAACTGTACTGACCCAACTGTGCCGTCCCAATGGTTGCAAGCAGATTCAGTGCATGATTTGCCTATCGCAGCACACAAAGATCTCCGACTTGCGAACGCATTTGGATAGCCATCAGTATGTGGTAAAGTTTGCGGAGGACCGTGGTCAACCGGAGAGTATTGCTAGCATTTCACGCGCACTTTACCCAGAGCTAGCCACGCCGATGACGCACCCACAGCTAATCGAGCGCATTCAAAGTGATGTTGGGAAAGGTATAGAGTTGGAAAGATTCACATCGATTACCAACGAGGCGGGCATTGAGCTTAGCCTGGAAAGCAGCGAAACTGAAACCGATTCGGACTCTGCCGAGGCAACTGAAAGCAGCACCAGGACGCTTTACAGCTGTGATCTTTGCCAGGTAAAGGTACCGCGCAAATATCAACTATACGCCCATCAGTTGGAAAAGCATGCGTGGCAGAAGGCGACGCATGTTTGCAGCTACTGCCAGGCCAGATTTGTGAGTGAACAGTTGCTGGAACACCATTACCGCACCCTTTGCGGTAACGGACAACGTCGCTTCTATTGTCGTAAATGTCCATTGCGTTTTCGCTGGCGCGAAAACCTAAAGTTGCACTCAGACGTGGCGCATCAGGAAGTTTCTGCGGAGCTGTCAAATTTGGCTATGCCGGAACACGGGACGTTGGTTCCCATTATTAGCTACGACTGTACCGAATGCCATCGTagctttaaaatgcaaaaggaTCTCACCAGGCACACCCTGATGCATGCCCAGGAGTCGAGCATTTATCGTTGTCGCTGGTGTGCACGGCGCTTCTATCGCCAAGCAAATCTGCTGCAGCACATTGAACGCCATGGCATAAGCGCCGAGCAACTTCCCTACGCGGAGGCGCTTCTCAATGCCAGCCGACATCCCCATGGCCAGAAGATCATCCAATGCAAAGTGTGCAATGTGACATACCCTACCATAGCTGCATTGCGAGCTCATTTACAGTCCGCGCCAGCAGGCACCCACCATAAACTTGACTCGTTACTCAACTACTCCATAACCAACCAGCTAGGCTACGAGTTGCAGCTGGACGACTCGGAAACAGATGAGGAGGAGAAGCCACCTGGGACACCCCTGCAGTACACTTGCAGCATGTGCCAGCTGCGTTGTGTACGCAAGTTCGAGTTGCACCAGCACCAACAAGCGATGCATCGACTCGAGCGCATAACCGAGGGCTGTAGTACCTGCATCTTTAAGAGTGTCTCGGCGGATCTTATTGCCTATCACCGTCGCGCGTTGTGTGAGAACACTGAGAAACAGTTCAAATGCGCCAAATGCGGTTACAAGTTTATGTGGGAGGCGAATATGTTGAAACACATGCAACTTCAGCATCCGACCAGTGACGACCAGCAGGATTCCCATTCCATTTCCTTGGCCAGTGGCGAAAGCCAGATCTTTCAGTGCGGTCAGTGTCCAAGTAAATATAATCGCAAGGACCGCCTCACCGCACACGTGAAGAAATGTCATGCAACGGGATCAACTGGTTCTACTGTTGATTCAACAAAGGCGGCAAAGAGTTCAACTGCCGCCAAGCAgcagaaaagttttctttgcgCCTTCTGCGGCAAGGCTGTGAGCTCCTCCTCCAATCTTATTATACACATTCGCCGGCATACCGGCGAGAAGCCTTTCAAGTGCGACTATTGCGAAATGGCCTTTCCGCGCTCATCTGATCTCCAGTGTCATCGGCGAACCCATACGGGCGAGCGTCCTCACATCTGCACCGTATGTCAGAAGGGTTTCGCCCGATCCtacaagctgcagcagcatatGCGTATCCACAGTGGCGAACGTCCCTACAAGTGTACCTATTGCGACAAAAGCTTCACCCAGTCGAATGATCTGACGCTTCACATACGGCGGCATACGGGCGAGCGTCCTTATCAGTGCAACACGTGCGGGGAGCGTTTCATTCAGGGCACGGCTCTTAAGAATCATCGGATACAGCAAGGACACTACGAGACGGATGTGGACCAATTAAGAGATAACAAGCCAAACCCATTGACTATTAattaa
Protein Sequence
MLPTDICRTCGIQDDSLLPLATRTDKYANKSLNDILHELTQNDPLQENTDDNLPQHLCGDCLLKLESAYAFVLQARQTQEQLLQQLRKSLQTKCLDEIPIDINMQHIKTETNFDLDGQLSRKTKSEDHEVDVEEEPDMATVSIPVLKWQPESDSDGGQVAVDDQEVDFKPKYLRRSARKAKPFTDSENEALSAYTKPLPVKRPRGRPPRLPKKETINEEGRYVCEVCGKTFSWYRDMQRHARIHFEQANYVCDSCGKSFLRKDKYVYHLRSHERRAAKWQALQLSSEWRFAERLYSSGRLKRVQCKLCGLKCQRIVELREHLLSHASIDTLSKLSLESDVIKEQYASGQWQLNLALIKQQVCEDIAEGREKLDKYCVVVNAYGYELCLSDSDEELSSLSPQYQCRPCKSTFTRKYSLMRHTLEEHTKRESDVIWQRCDVCQIGFVCNKLLEQHKRSQCHNKLKRYSCAKCPGKFIWIQNLEQHACSQRSKLLEEEQRAEVRRRFQCCLCDAQVDNMTQLRAHLLQHRDGYTGIDPEQQSTFFISYYPDGLDCSLSELSARIANDFELGAYERYFNASTGSGQELDFNASDTDLSDAEKLISAPALHLCSLCGETRKRLTQLLEHQESQHNALETPLPHPCEDCDMSFVAESLLQRHRQRVCAKRHVNYQCQQCSQRFCWRSNYERHLQIHHDMHGEADAEVAVEDDSSLRRKRRNTGARLQCTECEKVFIWPKDLTRHKRLHQPQALAQFQCSHCERKFHRKDGLKSHMRVHGEQQHDLTVTSEQVASMVQRMPTVLTQLCRPNGCKQIQCMICLSQHTKISDLRTHLDSHQYVVKFAEDRGQPESIASISRALYPELATPMTHPQLIERIQSDVGKGIELERFTSITNEAGIELSLESSETETDSDSAEATESSTRTLYSCDLCQVKVPRKYQLYAHQLEKHAWQKATHVCSYCQARFVSEQLLEHHYRTLCGNGQRRFYCRKCPLRFRWRENLKLHSDVAHQEVSAELSNLAMPEHGTLVPIISYDCTECHRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRQANLLQHIERHGISAEQLPYAEALLNASRHPHGQKIIQCKVCNVTYPTIAALRAHLQSAPAGTHHKLDSLLNYSITNQLGYELQLDDSETDEEEKPPGTPLQYTCSMCQLRCVRKFELHQHQQAMHRLERITEGCSTCIFKSVSADLIAYHRRALCENTEKQFKCAKCGYKFMWEANMLKHMQLQHPTSDDQQDSHSISLASGESQIFQCGQCPSKYNRKDRLTAHVKKCHATGSTGSTVDSTKAAKSSTAAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCEMAFPRSSDLQCHRRTHTGERPHICTVCQKGFARSYKLQQHMRIHSGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRIQQGHYETDVDQLRDNKPNPLTIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-