Basic Information

Gene Symbol
osa
Assembly
GCA_037075185.1
Location
JBAMCK010000271.1:289636-298512[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3 3.7e+03 -1.6 0.0 13 46 246 281 242 284 0.82
2 2 1.7e-24 2.8e-21 75.7 0.0 3 89 490 576 488 576 0.91

Sequence Information

Coding Sequence
ATGGGTTCTGGCCCGCCCGGTACACCAAACCCACAACAAGTCATGAGGCCAACACCATCGCCTACAGGCTCGTCGGGGTCACGATCTATGTCTCCTGCAGTGGCACAAAATCATCCAATCTCTCGCCCGGCGAGTAATCAGTCAAGTAGTGGAGGGCCAATGCAGCAACCGACAGTGGTAGCTGGTCCACCTCCGCTGCCACCACATGGTCTACCAGGTGGACCACCGTCTCAGCAACAatctcagcagcaacaggcttCAAATTCAGCATCTTCAGCGAGCAATTCGCCGCAGCAGACGCCGCCACCAACTCCGGCGCCAAACCAAAATGTTAACAACATGGCTACACCACCGCCTCCGCCTCAGGGAAGTACAGGTGGTTATCCAATTCCGCAGCATATACATGGCGGTTACAAAATGAGCTTACCGGGACAAAGCCCCGGCGCTCAAGGATATCCTCCACAGCAATATCCTCAAGGCAACTacccgccacgcccccagtATCCATCAGGAGCCTATGGAACTGGCCCACAACCTCCACCAAGTAGCCAGTCTACTGGGGGAGCCAACAGCATGCCTTCCGGTGCACAAGCTGGTTATCCTCGATCTATGCCTAACCACGGTAGTGGAAGCCCTCATCCCCAGTATCCACCATATCAGTGGGTGCCACCCTCGCCCCAACAGTCTGGGCCTGGTAGTGGATCTGGACAAATTCCCACTGGTATTGGCAACCACGTGCAGGGAAAGGGCACTCCACCACCAGTTGGACCACCACCACAGAGCAGCGGCTCTCCTCGTCCTCTTAACTATTTAAAGCAGCATTTACAACACAAAGGTGGATATGGCGCCAGTCCAGCGGGGCCACAACCACAAGGCTATGGCAATGGGCCAACAGGCATGCATCCCGCGATGCCTATGGGGCCGCCACATCATATGGGTCCGCCACAAAGCATGGGGCCACCTACCAGCACGCCACCGCAATCTATGATGGGTGCACAGACTGGCAGTGACACCGAACATATATCACAAGATAATGGTATAAGTTCATCAGGTTCTTCGCCAGCTGCAGGCTTACACGCAGTTACCGCAGTAGTCACAACTGGTCCAGATGGTACACCAATGGATGAAGTTAGTCAGCAGAGTACTCTCTCAAATGCTTCGGCTGCATCAGGCGAAGATCCACAATGTACTACGCCAAAGTCGCGAAAACATGATCCATATAGCCAAAGCCATTTAGCTCCACCAAGCACTTCTCCACATCCAGTTGTCATGCACGGAGGCGGTGGTCCGTCAGGCGAAGAGTACGAAATGAATTCGCCTCCGAATTGGCCACGTCCAGCCGCAAACACACAGGTTTTCAACAGTCATACTCCTGTTCAACAAGAGCCATTTCGCAGCACCATAACGACTACTAAGAAATCGGATTCTCTTTGCAAGTTGTATGAAATGGATGATAATCCGGATAGACGAGGTTGGCTAGACAAATTGCGTGCTTTTATGGAGGAACGGCGTACACCAATAACGGCGTGCCCAACAATCTCAAAACAGCCACTTGATTTATATaggttatatatttatgtaaaagaaCGTGGCGGATTCGTCGAGGTATGCAAGGTGACTAAGAGCAAGACCTGGAAGGATATTGCCGGTCTTTTGGGAATTGGTGCCAGCAGTAGTGCTGCATATACACTTCGTAAACATTATACAAAGAATCTGTTGACATTTGAGTGTCACTTTGACCGCGGCGACATTGATCCATTGCCCATCATTCAGCAAGTGGAGGCCGGCAGCAAGAAAAAGACAACGAAAGCAGCATCGGTGCCATCGCCAGGGTCATCGAATTCGCAGGACTCTTTCCCTGCACCACCTGGCGGCGCTCCAAACACAGCAATCGATGGCTATACAAGCTACACTGGCGCTGGTGCGTATCCACCATCTGGTGGTCCCCAACCAGATTATGCTGCAACAGGTCAAATGCCAAGGCCACCGTCGCAAAACAATCCGCAGGCAGCTCATCCTGGCACTCAAAATCAATCAGCTGCCACTGTTGCCGGTGATAACATAAATGTGAGCAATCCCTTCGAAGATCCAATTGCTGGTGGTGTGGCCGCCGGTGGTGTtactattgctgttgctgcagttggtgGTGCGTCACACGGTGCTCCTCCACCGCCCCCACATTCACCGCACACAGCGCCACAATCGAGCAcccaacaccaccaacaaggCATTCCAACGCAattgccgtcgccgtcgcagcaACCACCGGCGCCCCCACCTCAGCAACATGGGCAGCCATCGACGCAGCATGCGCGCCCTGGAACTGGAGTACCTTATCCACAGGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGgTTCTCCTTATCCAACACAACCTGGAGCTTATGGTCAATATGGTTCGAGCGATCAGTACAGCTCCGCTGGCCCGCCTGGTCAACCTTTTGGACCAAATCAGGGCCAATATCCGCCACAGAATCGCAATATGTACCCTCCCTATGGACCCGAAGGGGAAGCCCCTCCAGCTGGTGCTAACCAGTACGGACCCTATGGAAACCGGCCGTATAGTCAAGCACCACCTGGTGGACCCGGAGGACCACCAACACAAGCTGTTACGGGTGGCCCACCAGTTAGTGGAGCGCCAGTAGCCCCTCCAAGTAGTGGCTACGTTCCAGGCACTCCAAATCAGCAGGATTACTATAGGCCGCCGGATCAGAGTCCACAACCGCGACGACATCCTGACTTCATTAAAGATTCTCAGCCTTACCCAGGCTATGCTGCGCGTCCTCAGATTTATGgtgGTTGGCAAGGTAACAATCCGCAGTATCGTCCTCAATATCCCACATCGTCTGCGCCACAGTCGTGGGGCAATGCACCACCACGGGGTGCAGCACCTCCTGGAGGTCCACACGGACAGCAGCAAGCAGGAGTAGCTCAATGGGAACAGCATCGTTATCCACCTCAGCAGCCTccaccaccacaacaacagccgccTTACCAGCAAAGTACGCCACctggacaacaacagcagccggcaCCACAATGGGCGCAAATAAATGCGGTTCAGGCGCCACCACAAACAAGTATTTCGCAGACGGGCACTTCATTGCGTCCGCCCACTGGAGTTGCACAGCAACAACGTATGCCCAGTGGAGTGCCTGTAATGCCGCCACAGCAGCCGCAAGGGCAGCCAGTTCCACAACCACCACATGGAGGAGTACCAACTTCAAGTATGGCTTCTGTAGCTGGAGGCATGGTAAAGCCGCCCTACGCTATGCCGCCACCATCACAGTCTGGAGGTGCTTCACCTGGTGTGCCAATGGTTGGAAGTGCACCTGTCACAATGATTGCGCAAAAGCCGTCGCCTATAGTTGGACAAGGAATGCCGCCCAACCAACAGCAACCACCTCATCAAATCTCCAATCAGCAAGCTCCCTATCCCCTACAAGTAACTGGCTCAGGGGCACAGATGGTTAAAAAGGATCTAATCTTTCCCCACGATTGTGTTGAGTCAACTACGCCCGTACTTTACCGTCGAAAACGGCTGACTAAGCTTGACGTCTGCCCTGTCGATCCATGGCGAATTTTTATGGCCATGCGTTCAGGCTTACTTACCGAGTGTACATGGGCATTAGATGTCCTTAATGTTCTTTTGTTTGACGATTCCACAGTACAATTTTTTGGCATATCAAATTTGCCCGGTCTGCTAACTTTATTGTTGGAACACTTCCAAAAAAATCTCGCCGAAATGTTTGATGAACGTTGTGATGAAGCGCCAGATGATCCAGATGATGATGCTGACAGCGGTACTGTAATATCATTAAAAGTTGAAGACAAGCTGCAACGAAAGCAGATTCGTTCTGCGCACAGCATTTCCAGCTATAATCGTAGAAGACACTATGAAAATATGGATGTAAAGCGTGTTGGCCGCAGTGATGACTCAGATGATGCAGATGAGGGAATTGACTTGGGTCAGGTACGCGTTCAACCCAATCCTGAAGAACGTTCAATTCTTCTTTCATTCACACCCAATTACACTCTGGTAACGCGGAAAGGTGTACCAGTCCGCATTCAAACGGCTGAAAACGATATATTCGTAGACGAGCGCCAAAAAGCTTGGGATATTGACACAAATAAGTTGTATGAGCAGCTGGAACCTGTGGGCAGTAATGCTTGGACTTATGGCTTTACGGAACTGGATCCACTTGATGGCATCATCGATGTTTTTAAGTCAGAGATTGTTAACATTCCATTTGCGCGATTTATACGCTCTAAACACAAGAGCAAACAGGAAGTCgcacaaaaaagtaaaaataccCCTAAACAAGATGACATATCCTCTGTTCTTAAGCAAGAGGAGACCACAAGTAGTACTGAAGACAGCAGTCTACTCCAGCAGacttacaacaaaaaaagacgACTTGTGAGTAATATTGGTGCACCCAGTAGTGATAACAAGAAGTCTAAACAGGAGGAGGAGTTTACACAGCCAGCTGTGGACGCAAAAAAAGATATAGACAACGAAAGTGTCGGCGTAAATACAACCGACAGTGATTGTCGCGCCATTGATATGGAAATCGAATCACCGCAACAGTTACGTCTTACAAATGGAGTCGGCTGTCAGCCCAAGGGATTTGATCCGAAGTCAACAGTACGAGATGATGCGCATGTTTTACAACGACGTCGTGACTCTAGTTACGAAGACGAATGCTACACGCGGGACGAAGCCTCTTTGTACTTAGTAAATGACAGTCAGGACTCATTAGCACGTCGCTGTATTGCGCTTTCCAATATCTTTCGAAATTTGACGTTTGTCCCTGGCAATGAGACGGTGCTTGCTAAGTCTACGAGATTTCTAGCGGTGCTAGGTCGATTACTTTTACTAAACCACGATCACTTGCGGCGGACTCCCAAGACTCGCAACTACGACCGAGAAGAGGACACAGACTTTACCGACTCTTGCAGCTCGCTGCAGGGAGAACGTGAATGGTGGTgggaatatttaattaccaTACGAGAGAACATGCTCGTAGCCATGGCTAACATAGCTGGACATCTAGAACTTTCCCGCTACGATGAACTAATTGCACGCCCGCTTATTGACGGATTATTACACTGGGCTGTATGTCCCAGTGCGCATGGCCAAGACCCATTTCCATCCTGTGGCCCAAATTCTGCACTATCCCCACAACGGCTTGCTTTGGAAGCCCTGTGCAAATTGTGCGTAACAGATGCGAATGTTGACTTGGTTATAGCCACACCGCCTTTTTCACGTTTAGAGAAACTGTGCGCGGTACTTACGCGTCACTTGTGTCGAAATGAAGATCAAGTATTGAGGGAGTTCTCTGTTAACCTGCTGCATTACCTGGCTGCGGCAGACAGTGCCATGGCGCGCACTGTAGCACTGCAGTCACCATGCATCTCTTATCTCGTCGCATTTATTGAACAAGCCGAACAAACCGCACTGGGAGTCGCAAATCAGCACGGAATAAACTACTTGAGAGAAAATCCAGATTCAATGGGAACCAGCTTGGATATGTTGCGAAGAGCAGCGGGCACGTTGCTTCACTTGGCTAAGCATCCTGATAATCGCTCACTATTTATGCAGCAGGAACAGCGATTGCTTGGATTAGTTATGTCTCACATATTGGATCAACAAGTGGCATTGATAATATCTCGAGTGCTTTATCAGGTATCTCGCGGAACTGGACCACTGCATTCGGTTGAGTACAGATTGTTgcagcaacgacagcaacaacaacggcccAGTCAGGCTCCTTCCGAAAAGCCAATTGCGCCAACACCAACTATAAATACTAAACCCGAGCCCTGCATCCAGCCGGAACTGTCTGCTGATGTTAAGTCTTCTGCTGGTGTTTCCACGACAGCTGTAGTAAACGATGATAGTAGTAACAGCAGTAACCAACAATTACCGCCAGCGGCAACATTTAATGATGTAAGCAATAGTAGCACCAACAGCAATAGCTGCGGCACCGTCAGCAGCAATCAGACAAATAGCAGCAGCTTGGGTAGCAACAGTCAGGCCACTCTTAACAACTTAGTGACCCCTAGCGAACAAGTCGGTAAAACTCCTTTAGCTTCGTCTTCCGCTGTGTCATCCAACAATTTAGGTCACATTAACGATACCGCTTCGTCGCCGAATGCAACTCCTCCATCAGCTGCGCCACCggctgcaaatacaaatacaacagctgcagttgcGTAG
Protein Sequence
MGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVAGPPPLPPHGLPGGPPSQQQSQQQQASNSASSASNSPQQTPPPTPAPNQNVNNMATPPPPPQGSTGGYPIPQHIHGGYKMSLPGQSPGAQGYPPQQYPQGNYPPRPQYPSGAYGTGPQPPPSSQSTGGANSMPSGAQAGYPRSMPNHGSGSPHPQYPPYQWVPPSPQQSGPGSGSGQIPTGIGNHVQGKGTPPPVGPPPQSSGSPRPLNYLKQHLQHKGGYGASPAGPQPQGYGNGPTGMHPAMPMGPPHHMGPPQSMGPPTSTPPQSMMGAQTGSDTEHISQDNGISSSGSSPAAGLHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGGGGPSGEEYEMNSPPNWPRPAANTQVFNSHTPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGAPNTAIDGYTSYTGAGAYPPSGGPQPDYAATGQMPRPPSQNNPQAAHPGTQNQSAATVAGDNINVSNPFEDPIAGGVAAGGVTIAVAAVGGASHGAPPPPPHSPHTAPQSSTQHHQQGIPTQLPSPSQQPPAPPPQQHGQPSTQHARPGTGVPYPQGSSGYPTPVSRTPGSPYPTQPGAYGQYGSSDQYSSAGPPGQPFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGGPGGPPTQAVTGGPPVSGAPVAPPSSGYVPGTPNQQDYYRPPDQSPQPRRHPDFIKDSQPYPGYAARPQIYGGWQGNNPQYRPQYPTSSAPQSWGNAPPRGAAPPGGPHGQQQAGVAQWEQHRYPPQQPPPPQQQPPYQQSTPPGQQQQPAPQWAQINAVQAPPQTSISQTGTSLRPPTGVAQQQRMPSGVPVMPPQQPQGQPVPQPPHGGVPTSSMASVAGGMVKPPYAMPPPSQSGGASPGVPMVGSAPVTMIAQKPSPIVGQGMPPNQQQPPHQISNQQAPYPLQVTGSGAQMVKKDLIFPHDCVESTTPVLYRRKRLTKLDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCDEAPDDPDDDADSGTVISLKVEDKLQRKQIRSAHSISSYNRRRHYENMDVKRVGRSDDSDDADEGIDLGQVRVQPNPEERSILLSFTPNYTLVTRKGVPVRIQTAENDIFVDERQKAWDIDTNKLYEQLEPVGSNAWTYGFTELDPLDGIIDVFKSEIVNIPFARFIRSKHKSKQEVAQKSKNTPKQDDISSVLKQEETTSSTEDSSLLQQTYNKKRRLVSNIGAPSSDNKKSKQEEEFTQPAVDAKKDIDNESVGVNTTDSDCRAIDMEIESPQQLRLTNGVGCQPKGFDPKSTVRDDAHVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDTDFTDSCSSLQGEREWWWEYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPLHSVEYRLLQQRQQQQRPSQAPSEKPIAPTPTINTKPEPCIQPELSADVKSSAGVSTTAVVNDDSSNSSNQQLPPAATFNDVSNSSTNSNSCGTVSSNQTNSSSLGSNSQATLNNLVTPSEQVGKTPLASSSAVSSNNLGHINDTASSPNATPPSAAPPAANTNTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00576844;
90% Identity
iTF_00572382;
80% Identity
-