Dpse011718.1
Basic Information
- Insect
- Drosophila pseudotakahashii
- Gene Symbol
- pnr
- Assembly
- GCA_035046095.1
- Location
- JAWNOE010000179.1:8369923-8374218[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.89 2.2e+03 -1.4 0.1 7 25 15 33 14 33 0.80 2 2 9.1e-17 2.3e-13 49.8 2.5 1 35 476 509 476 510 0.98
Sequence Information
- Coding Sequence
- ATGTACGATGTTCCGTCGCATAATCATAATAGTGCCCCAGACAGAAATACGGCCGATTTTCGAAGGGACGAGAAGCGTGCCAACTGCTTTTGCAGTGCTTTGAGCCCCAATCAGTGCAGCTGCGTCGGTGATAACTCGCTATCAGTATCCGCGGTGACCAATAATGAAACGGGAACGGGTCCAAGCCAACTCCAACCCAAGTCGCAGTCCCAAATGCAAACGCAAACGCAAACCCTTCACCTTCaccaaaaccaaacccaaaCTAAAACCCATTACACGCCAAGTGTGCCTTCTGCTGCGGACACAAAATCGAGTGAACGCGAACGCCAATTGGAGTCGGACATCGCCGAAAGATCAGTATTCAAAAGTCAgtcatcgtcgtcatcgtcgacccacgaacaacaacaacaacatataGCACGCGGGGAGGTCcagtcccattcccattcccaatcaAAATCGGAACTCCCGCGAGAGGAGCATGAGCGTAATCATAATCAGCGCGAGGAGACATGTGTGAATGTAGATACAACAAATATAAGCGGAACCGATAACTACGGCAAAGAGCACGGCAGAGATGATTCATCACCACATCTTACATTTCAGATATTCAACTGTCTCTCTATTAAGGCACTGCCTAACGATGGACTACCAAACGTGATTTGTGGCGAATGCAGACAAAAATTGGattcatttgaaaaatttcgtaCCATGGCGCACAACTCACAAATAGCTttgaaagaatttttaaatatatcaaaaaatcttaatctaGACGCAAATGATTTGGAAATTAAGCTTGATGCCATTTTAAAGGCTTCATCGGAGGCTATAGCGGCAAAGGCTCTGACGGAGCTAAGCACGTTTTCTAAAGTTAAGTACGACCAGATTGGTGGGTCCGACTACAAGTCGAAGGCACCGAAGGCGAGTACCGGATCCTTACTAGACTCTGGCGACAGCTCCGACTCTCACAAACTGGAGATGGACATCACGTCCTCAATTAATGATAGAAAGACCCCGGATAGCCTAAGCTCGGACCACGCCACGGATGCGGCAACTACTCAACTGTGGCAGGCACTGGCCCGATCAGCCGctaaaagcAAAGAGGAAAATCAGGCCACACAAATAATTCGTAGCATGATGAGCGCCCAGTCTTTCGTGTTTCCGGTTCCGTCGACAGTATCATTTACAAAAGTACCTGAAGAACCCATAGCACTATTAAAGGATCTATCAGAGGCTCAATCCAGCAAATCAAAACCATGTAGAAGAAAACAAAGTTTTCCTACCAAAACTGATTGCATCGATGTAGTTAATGAGAATGTGACTGATACTTATACCACTTCAGATGCAGCTCCAGAGGAAAAGAAAGATAAAAGGAACATTAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCGAATTGTGGCACCCTCACCACAACAATTTGGAGACGAAGTGTTCGAGGAGAAATGGTTTGCAACGCCTGCGGATTGTATTTCAAGCTGCATGGGGTCAACAGGCCGCACTCAATGAGACGCGATACCATACACACCAGACGCAGGCGTCCTAAAGAATTGGAGCGATCTAAAAAGAAACACAAGCAAATGTCATCGTGTTCTTCAATGGAACCAACGAAACCAGACTTCTTGACGTCTAGGGAACCCCTTGATATATCTGGTCTGGTTTTAAATaaatacaaAAAGGAAATTGATGAGTCCGAAACCGCAGCAGCacttaaagatattttattaaggCGGAAGAAGTCAAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCTATCCGCACCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MYDVPSHNHNSAPDRNTADFRRDEKRANCFCSALSPNQCSCVGDNSLSVSAVTNNETGTGPSQLQPKSQSQMQTQTQTLHLHQNQTQTKTHYTPSVPSAADTKSSERERQLESDIAERSVFKSQSSSSSSTHEQQQQHIARGEVQSHSHSQSKSELPREEHERNHNQREETCVNVDTTNISGTDNYGKEHGRDDSSPHLTFQIFNCLSIKALPNDGLPNVICGECRQKLDSFEKFRTMAHNSQIALKEFLNISKNLNLDANDLEIKLDAILKASSEAIAAKALTELSTFSKVKYDQIGGSDYKSKAPKASTGSLLDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEENQATQIIRSMMSAQSFVFPVPSTVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYTTSDAAPEEKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSSCSSMEPTKPDFLTSREPLDISGLVLNKYKKEIDESETAAALKDILLRRKKSNSLPAFNDTCESADLSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537167; iTF_00548458; iTF_00494770;
- 90% Identity
- iTF_00537167;
- 80% Identity
- -