Basic Information

Gene Symbol
ncor1
Assembly
GCA_035046095.1
Location
JAWNOE010000105.1:11904934-11912917[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-07 0.00019 21.8 0.0 3 43 814 854 813 856 0.97

Sequence Information

Coding Sequence
ATGGCGCATCACGAAAAAGAAAGAGATGGCTACACCAGGGGCCTCGAGCAGCAGTATGCCAAGCAGGTGGCGCAgctacagcagcagcatcagtcgcaccaccagcagcagcagcagcagcaggagcagcaacagcgCACCACCCTGCATCCGCAgatccaccaccaccaccaacagcagcagcagcagcaacagcagatgcaacaacaacagcagcagcagcaatcctCGAGAGCGGCGGCCAGTCCTTTGTCACCACCTCGTCCTGGAAATCCtggcagcggcaacagcagcggcggcagcaacagcagcaatgcagcagcggcagcagcagcagcggcagccgcAGCGGCGGCCGTCAACACCGGCTACGCGCCACCGCCCCCGCAGCATCGTTTTATCCAGAACCCGGGCTATAGCATTGCCCCGGCGCCCACCTACCGTGAGAATCCCTACTCGCGTCACACCCAaattcagcagcagcagcagcagcaacaacagcagcaacagcaacaggcaGCAGCCTCGATGCCCGAATATCAGAGGGCAGCAGCTCGAGCGGCTGTGGCAGCCGTTTCGGCGGGTAAAGGCGGCAACGTTTCTGGCCAAAGttccaacagcagcagcagcagcggcggaggaggaggaggatcagCCGGTGGATCAGCTCCTCCGGGCGGCGGTGTCGTTCAGGTGTCGCAATCCAGCGGAGTTTTGGTCATGGAAGCCATGCCACACTATGCCAGCCAACCAAATAGTAATCCctcccagcagcaacagcagcaaggcAGCAATCCCAGTGGCGCGGGAGCAACATCGGCCGCCTCATCCGGTGCCAGCAGCATAATGGTCGGGAATCTGGGGCGCATCCTGATGCCCCATCCGCAGGCTCTCCAATATACCAGCGAGTACCTGACCAATGCCACAGCGGTGGCCGTTGCTGCAGCGGCGGTTAACCAGCGACAGCAGTTGCagctacagcagcagcaacagcagcagcagcagcaacaacaacatccgCCCGAGCCATTTGGTGGCCAGCAGCCGTACAAGAAGCAACGGCTTAGCGAGGCCAATGCCAGCAACATGAATCACCTGCCACCACAcccgcagcaacatcagcaacagcagcagcagcaacatcaggcGCACCAGCAACACCAGCGATCCTCGCCAGCccaagtgcaacagcaacagcagcagcagcagatgaaCAGCAGTCGGCAGAGTCACAATGACATGTGCCGACAAGTGGTCACCACGCCAATGGGAATGCAACTCAAGGTGGAGACACTGcctcagcagcaacagcaacagcaacagctgcagcagcagcaacaacaacaacatgccTCACAATCCCAGAGCCGAAACCAACCAGCGGTGAGCAGCATGTCCTCCGGTGTAAGCCAACCCGTGGGCACCATTACCGTTTCCACGGCAGGATCGTCGGCAGGTCACAGCAACAGCGGCAATGTTGCCGGCGGAACGGGCTCGGGAAACAGCGGATCGGCCAGCACAGAGGCCTACCATCCGCAGGTGGAGGCCATTTCGCCCACGTTGCCCAGCGACAGTTCGATCGAGGAGCGCGGACGGACGAGCGCCAAGGAGGACCTTCTGATGCAGATCCAGAAGGTGGACAATGAGATCAAGTCCGCCGAGACGACAATGGAGACGCTGCGCAAGAAGGAGAAGAACCTGATGGAGGAGGCCGCCCTGGCCAAGGAGCAGAAGGCCGCCAAGGAGGTGAACgttgacaacaacaacggcgatCAGCAGGCGGAGGAGGTCGTGGAGCTGGCCTGGCGCAGTCAAATGCTGGCGGAGAAGATCTATGCGGCCAATCGGAAGACGGCCAGTGCGCAACATTCCATGCTGCAGAATGCAGCGGCCGAGGAATCCTCACCGGGCTCCGTGGCCGGACGTCCCTGGCTGCCGCTCTACAACCAGCCACTCGATGTGGAGGCCCTCACCCTGTTGATACGCCAGCACCAGAGTCAGGTGCGAGCCCCCCTGCTGCAGCACATCAGGAAACTGAAAGCGGAACGCTGGGTCCACAACCAGGGACTGGTGGAGAAATACCTCAAGGAGCAGGCCGATTGGCAGCGACGATGCGAACGCATGGAGGCGAGTGCGAAGAGAAAAGCACGCGAGGCCAAGAATCGCGAGTTCTTCGAGAAGGTCTTCACGGAGCTGAGGAAACAGCGCGAGGACAAGGAGCGCTTCAATCGCGTCGGTTCGCGCATCAAATCCGAGGCCGATCTCGAGGAGATCATGGACGGTCTGCAGGAGCAGGCGCTCGAGGACAAGAAGATGCGTTCGTATGCGGTGATACCGCCGCTAATGCACGATTCCCGCCAGCGTCGATGCGCCTATCACAACGAGAACGGACGCATCGAGGATATGGTGGCGGTGCATCAGCAGCGCAAGGCCCTCAATATGTGGACAGCGGGCGAGAAGGAGACGTTCAAGGAGAAGTACTTGCAGCATCCGAAGAACTTTGGGGCCATCGCGGCCAGTTTGGATCGCAAGTCGCCCCAGGACTGCGTACGCTACTACTACCTCAGCAAGAAGACCGAGAACTACAAGCAGTTGCTCCGCAAATCCCGCCAGCGGACGCGTAGTTCGCGTAATCCGGCCAAGGCCCAGGCCGCTCAGCCGCAGTGCATCATTGATTCGATGACGACGGGCGTGATGACGCGACTGCAGcgcgagcagcagcaaaagtCCGGCAATCGTTCGTCCGCCGTCGCCGAGCGTGAGCGCGCCGAAAGGGCTGCCGAGCGGGAGCGTGTGGCGGAGAAGGCAGCCGCGGATGCTGCAAAAGCGGCTGAAAGTGCCGCCGAGAAGGCAAGTGCGGCCACCAAAGCCGTTGAGGCGACGGCTGCCGGTGAAAAGGTGGCCaaggcggcagcagcagcagcggcagcggcagcaggagcaggaggagcagccgccggagcaacagcggcagcaaatccagcagcaggagcaacgGATAAAACGGAAGCGTCTGGCAAAAGCGAAAAGAATGCGGCGACAGCTGGAGGAGCAACTGcggcaacatcagcaacacctgcagcatcagcaacagcaacaacaggagcgacagcagcaggagcagcagcaccaccaccagagATCTCAGCGGGCGGCGAGGCGGGGGCCAAGAGCAAAGCCGCCGAAGAGGAGGCAGCAGCGGCCACGGCAGGAGCAGCCACTGTGGCCACAGCGGGCACACCGGCCAGCGGAGCCAGTGCAGCGAGTGCGGGAGAGGCGACAACGGCAACGGGTGCCACGGCAACGGCGGCGGCCAAGGGAGCCGGGAAGCCAGAAACAGCGACCGAGCCGGCGGGTAGTGCGGCCAAGGGAGCGGATTCCCGGTTAGAGGCCAACAATGATCCGCTGGCCAAGACAACTGGTCCAAAAGCAGTCAATGCCGAGGGCTATAACGCCACCGGTGGCAGCAACACCAGCTCCAGTGCTACGACAGCCGCTGCTCCGGGCGTAACCTTGAATGGCTTCAAGCCGGGCTACCAAACGGTGGTCATGGCCAATGTGAAGGCCACGGCATCGGGTGTCGAGGATCCTGCGAGCGTCGGAGGTGTTCCTGGATCTGGATCTGCAGTGACGAATGCAGCGGGAACGACGACGGCGACGGGCGGCGGTGATAAGATCAACGTCAAGACAATGCCGTCAACCAGGGCCACTCCGAATTCAACATCCTCGACGGCAGCGGGTGAAAGTGGTGGAGCCACAGGAGTTCCCACTTTTGCCCACACCGCCACCACGGCGGGCAACTATCTGGGCCAAAAGCTGAAGGCGGCCCAGGTCGAGGGATTGGGAGCTGGCAATGATCTGCACTCGGATGTTAGTGAATCCAAGAGGAAGCGCTTCGAACTGAATTCTGGTGAGGCGACAGGAGGAAACGCATCATCGGccaatagcaacagcaacattagCAACAGCCACAGCCTGAAGGCCAATGCCAAGGATCAAACGATGGCCAAGACATCGTTGCCATCCGCGTCATCGGCATCGGTTGTCACATCCACGCCATcggcatcctcatcctcaGCCGGCTCCATGCTGCTGATCAGCGCCGCCTCCATCATGTCCACCGCATCGGGAGCCACATCCTCGAGCACGGCGACCACCACGGCCACCGCTTCGGCGATCTCTATGCCCCTACTGGCCGATGGCGGCGGCAATTTGATGGTCAACGCCTCCGAGCTTCTCGCCCTCGATGGCAAAGCTTCTGTTTGCCCTGCTGCCAGCGATTTCGATTAA
Protein Sequence
MAHHEKERDGYTRGLEQQYAKQVAQLQQQHQSHHQQQQQQQEQQQRTTLHPQIHHHHQQQQQQQQQMQQQQQQQQSSRAAASPLSPPRPGNPGSGNSSGGSNSSNAAAAAAAAAAAAAAVNTGYAPPPPQHRFIQNPGYSIAPAPTYRENPYSRHTQIQQQQQQQQQQQQQQAAASMPEYQRAAARAAVAAVSAGKGGNVSGQSSNSSSSSGGGGGGSAGGSAPPGGGVVQVSQSSGVLVMEAMPHYASQPNSNPSQQQQQQGSNPSGAGATSAASSGASSIMVGNLGRILMPHPQALQYTSEYLTNATAVAVAAAAVNQRQQLQLQQQQQQQQQQQQHPPEPFGGQQPYKKQRLSEANASNMNHLPPHPQQHQQQQQQQHQAHQQHQRSSPAQVQQQQQQQQMNSSRQSHNDMCRQVVTTPMGMQLKVETLPQQQQQQQQLQQQQQQQHASQSQSRNQPAVSSMSSGVSQPVGTITVSTAGSSAGHSNSGNVAGGTGSGNSGSASTEAYHPQVEAISPTLPSDSSIEERGRTSAKEDLLMQIQKVDNEIKSAETTMETLRKKEKNLMEEAALAKEQKAAKEVNVDNNNGDQQAEEVVELAWRSQMLAEKIYAANRKTASAQHSMLQNAAAEESSPGSVAGRPWLPLYNQPLDVEALTLLIRQHQSQVRAPLLQHIRKLKAERWVHNQGLVEKYLKEQADWQRRCERMEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDSRQRRCAYHNENGRIEDMVAVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSMTTGVMTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASAATKAVEATAAGEKVAKAAAAAAAAAAGAGGAAAGATAAANPAAGATDKTEASGKSEKNAATAGGATAATSATPAASATATTGATAAGAAAPPPEISAGGEAGAKSKAAEEEAAAATAGAATVATAGTPASGASAASAGEATTATGATATAAAKGAGKPETATEPAGSAAKGADSRLEANNDPLAKTTGPKAVNAEGYNATGGSNTSSSATTAAAPGVTLNGFKPGYQTVVMANVKATASGVEDPASVGGVPGSGSAVTNAAGTTTATGGGDKINVKTMPSTRATPNSTSSTAAGESGGATGVPTFAHTATTAGNYLGQKLKAAQVEGLGAGNDLHSDVSESKRKRFELNSGEATGGNASSANSNSNISNSHSLKANAKDQTMAKTSLPSASSASVVTSTPSASSSSAGSMLLISAASIMSTASGATSSSTATTTATASAISMPLLADGGGNLMVNASELLALDGKASVCPAASDFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00578479;
90% Identity
iTF_00536709; iTF_00578479;
80% Identity
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