Dpse016106.1
Basic Information
- Insect
- Drosophila pseudotakahashii
- Gene Symbol
- fru
- Assembly
- GCA_035046095.1
- Location
- JAWNOE010000247.1:5115982-5117973[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-12 1.2e-08 34.8 0.1 1 44 372 415 372 416 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGCCCAACGGCGCCGGTGGCCAGCAGCGGCGAGGTGGGTCAGACGTACTGCCTGCGCTGGAACAACCACCAGACGAACCTCGTCCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCAGCTTGGTCGTCGACGATGAGCAGTTCCAGGCGCATCGCGTCGTTCTGGCTGCCAATTCGCCGTATTTCCAGCACATCCTCAAGGATGTGCCGCAGGACCACTGCAGCATTATCCTGCCGGGAGTGAAGGGCTTCGAGATTGCCGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACGGCCAAGGAGCTGCAGGTGAAGGGTCTGTACGACAACCTGATGAAGTTCAACCACGCCAGCGTCACGCCCACCTCCAGTTCGGGAGCCAAGCCCCAGAATGGTTCGGCCTCCAATCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGTGCCGCCATCTCGAGCAGCTGCtcgccaccaccgccaccgcaGTTTGGCTATCAGCCGGGCTTTGGCCACTATCctccgcagcagcagccgttGTCGGCCAGTCAAGTCCCGGCTCCCGGCGAGGCTCCCCTGACCCCCACCCAGGCCACGCCCCATTCGGCGCCCTCGGGGGCTGGCGAAGCTGGCGGTCAGTGGCCGCTGACACCctccgctgccgccgccaTGCTGAACTCCGTCTACGAATCCGCCGCCGATATGAATCCTCTCAAGCGCAAGAAGCTGTCGGCCATCTCAAGCATGCTGCTCAGCGGAAATCGCGATACGCCCATCCTGAGAAACGTTCTGGCCCAGGCAAATCCCGCTGACTCCTCGCAACCCGGACCCCTGGCCATGAATGGCGAAAAGACGCCCACACATCCGCACCAGAGCAGCCAACTTCCAGCCGGATTGGGAGTGAGTGGTGGCGAGCGCAACCACAGCTTCAATGGGTCGGACTACGGCGGCGACAAGGAGCCACTGTCGCCCTACACGGATCGCTCCTTCGAGGAGGAGAGCGGCCAGTCAGGTGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACCCGGGCGGACATGATGTGCGCCATCCAGGCGGTGCGGGAGGGCATGAGTGCCCTGCAGGCAAGCCGGAAGTACGGCCTGCCCAGTCGCACCCTGTACGACAAGGTGCGTAAGCTGAACATCACCACCGGTCGTGGCACCCACCGCACCCCCAAACGCAGCCCTCCGGGAGCCGAGTCCTCTCAGGGATTCCCCTACTCCGCCgcggccgccgctgctgcccaCAACTACGGACATGGACACGGCCATGGCCATCACTCGGAGGCTAAGCGTGATCCGAAGGTGGACCATGTGCCCGCCCACCACGGCATGCCGCCCACCATTCCACCCTCGGCGGCCGCCCTCCTTGATCACGCCTTCCTGCAGCAGGCTCTGGAGAACCGCGGCGGCGACATGGCCGGCCGAGAGGCGCTCCATGCCATGGCTCTGGCCGCAGCTGCCCATGCCGCCGCCAACCGGCTGTCGAGCAGCCCCGCGGAGATGGACCAGCGCTCCAATGGCCATGGCATGCGATCGCCCAGTCCGCAGGGTCGTCACTACCCGCACGACCATGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGAACATGATCAAGCGGGAACGCGACCAGGACGAGCGTGATGATgccgacgacgaggaggaccACGAGCAGGAGCATGTGGAGGATCTTTCGCTGGCCAGGAAGGAGCGCCCGCAGTCGCCCTACTCGCCGCAGCCGGCTGAGGGTTCCGGAGTGATCATGCACGCCAGCAGTGCGTCCGCCAACGGCAAGGAGCACGAGGAGCACTACCCAGCCTCGCCGCCGTTCGTGCCCATGGGCCTGAAGCGGGAGCTGCTGGATGCTGGCGAGGATGCCCAGGCTCGGGCCGACTGA
- Protein Sequence
- MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSSGAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGFGHYPPQQQPLSASQVPAPGEAPLTPTQATPHSAPSGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPLAMNGEKTPTHPHQSSQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFPYSAAAAAAAHNYGHGHGHGHHSEAKRDPKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHYPHDHEAMDLEMEKHEQNMIKRERDQDERDDADDEEDHEQEHVEDLSLARKERPQSPYSPQPAEGSGVIMHASSASANGKEHEEHYPASPPFVPMGLKRELLDAGEDAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00515674;
- 90% Identity
- iTF_00539586;
- 80% Identity
- iTF_00581623;