Dpse019754.1
Basic Information
- Insect
- Drosophila pseudotakahashii
- Gene Symbol
- -
- Assembly
- GCA_035046095.1
- Location
- JAWNOE010000285.1:3780272-3781908[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-16 5.4e-13 48.7 0.0 2 45 351 394 350 394 0.95 2 3 0.057 97 3.1 0.0 28 37 424 433 419 438 0.89 3 3 3.8e-19 6.5e-16 58.1 0.0 2 42 460 500 459 502 0.94
Sequence Information
- Coding Sequence
- ATGAATCACCTCAAGTGGATGGGACACTCGTCCACGATAATGGACATACAACGCTCGCTCCGCAACGACAACCAGAACTGCGAGGTGGTGCTGGCCTCCAGGGACGGCGTCCGGGTGCGCGCCCATCTCTTCGTGCTGAGCACCTGCAGCGAGCTGATGCGCAACATCCTGGTGGACGTGCCGCGTGGTCAGGAGGCCACCATTGTGCTGCCCGACATCCGGGGAGACTTGCTCGAGAGCATGCTATCCTTCATCTACATGGGCGAAACGAGTCTGCCCTCCGCTTCGCTCTCCGAGTTCCTGGAGGCCATTAACCTGCTGGGCATCAAGTCGGCCATCAGTTTCGAGTGCAACCCATCGGCCAGTCCACCTGGCGGCGATGTGGAGAACGGTACTTTGGCCGTGGAGACAGCCAAGTCGATCACAGGGCTGCAAATCGCCGAAGCGGAGCTGctggacgacgaggaggagcccCAGCCGACGGTCACCGTGCCTGCCTCTGTCCTGGCGGAGCCACAGCATCAGCCCAGCCACTCTAGCCGCTCGCTGGAGTACCTGGATGTGTACGAGCCGCCAAAGATCACCTACTCCATCGAACACATGGACGGCAATTCCAGCGGCAACCAGTTTATTCTCACCGAGAACACGGGTACCTTCACCATCACACAGTCGGGGTCCAGTTTGTCCAAGATGGGAGGCGACGATACGGCCACCAGTGGCGCCGAAGTGGAGCTGGTAGACGATGATGTAGAGGCGGACATTGCTGAGGATTCGGAGGAGCACGAAACACAGATGATCGAGGAGGACTTCACGCCCACCGATCCACTAATCGAGCTGGGCAACGCCACCGAAatggacgacgacgaggaggatgtGACCGGCGAGCTAATGGACGAGGAAATCGAGGAAGAAGAGAAGCCACGCAAGTTGGGCGGCGGAAAGCCGCGAGGCCGTCGCCCCATTAACATCAAGAACGAGAAGCGATTGTCGCACAAGCCATCGCGACTCCAACAGTTTGTGGCGCTCAAGCGGGAAGTGAAAGACGATATCAACGACGCCTTGGATCTGGCGGCGGATGCAGTTATCTTGGAGGGATTGAGCCTGCAGAAGGCCGCCGACCGGTTTGACATCTCCAAGACGGTCCTGTGGCGACGCGTGCGCACCAATCCCGCCTACATGCGCAACAACCGGGAACGGCCATCGCTGCTCGAGGCCTACGAGCGACTGAAAAACGGCGATTCACTTAAGAGCATCAGCACGGAGCTGCAAATCCCCATGTCCACGTTGCACCGGCACAAGGTGCGCCTGTCGGCCCAGGGACGCCTGCCCGACTTTGTGGCCTGCCGCCGGCGCGATAGTACGCCCAAGGATGAGCTAAGGGACAAACTGGCCAAGGCCGTGCATGCTTGCATACACGAGGGAATGTCCCAGAACCACGCGGCCAACCTGTTCGAGATCCCCAAGAGCACGCTCTGGCGACACCTGCAGCGACGCATGTCCAACCAGGACCGGAAGGTCAAGAAAGAGCTGAAGGACGAGTACGAGGACGATCTGCTAAACTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRSLRNDNQNCEVVLASRDGVRVRAHLFVLSTCSELMRNILVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPPGGDVENGTLAVETAKSITGLQIAEAELLDDEEEPQPTVTVPASVLAEPQHQPSHSSRSLEYLDVYEPPKITYSIEHMDGNSSGNQFILTENTGTFTITQSGSSLSKMGGDDTATSGAEVELVDDDVEADIAEDSEEHETQMIEEDFTPTDPLIELGNATEMDDDEEDVTGELMDEEIEEEEKPRKLGGGKPRGRRPINIKNEKRLSHKPSRLQQFVALKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKVRLSAQGRLPDFVACRRRDSTPKDELRDKLAKAVHACIHEGMSQNHAANLFEIPKSTLWRHLQRRMSNQDRKVKKELKDEYEDDLLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605685;
- 90% Identity
- iTF_00605685;
- 80% Identity
- iTF_00581646;