g12056.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- SIZ1
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:16654255-16655286[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-24 1.8e-20 72.6 2.0 1 49 169 217 169 218 0.98
Sequence Information
- Coding Sequence
- ATGAGCTCGTTTGCCTATTTCGAAATAATCGCCCATCTCATTCCGCCGATTCGGCCTACTATGGAGCACGTGCTCATATGCTTGAATCTAACGGCAGAGAAGATGGATGCAATCAATGAGAGCTACATTTCCGACGCAGATGGCTACGGGGTTCAAGTTCGGCTCTACATTTGGGAAGGTTCAACCGCCCCAACGAACACTTTTCCCGACAACCTGGTCGTCCAAGTGAACGCGCAGCCGTGTGTCGTGCCTGAAACTcagcagcccataGACATTACCGCTAATTTGATACTTGAGCAGTCGCACAATTCCAACAAAATATCGGTGAAATGGTCTTCTGGCGACAGTCGCATCTTTTTTATGTCAGTGCTTTTGGTCAAAAAGCCTTCCGTCAATCAAATGGTAGATCTCATAAGGAACGGACGCATAATGGCAGCGGAGAGTGTTCAAAAAATGTTTTTGCTAGACGATGCCGTCCGCATGACGCCCCACATGCCCACGATGATCTCCCTAAAATGTCCGGTGGGCAAGAAGAAGATTCAGCTGCCCTGTCGCGGGCTGAACTGTTCGCACTTTCTGTGCTTTGACGCCGGTGCTTACCTCGAAATGAACGAGCGTCTGAATACCTGGGAGTGTCCAGTGTGCCACAAGGGGGCCCCTTTCGAGGATCTCGTTATAGACGGCTATTTTTATCATATCCTTAATTCGGGGCTACTGGGGAATGGCGACTTTGAGGTACTGGTCTACAAGGATGGCTCGTGGTGTGCTCCAAGCTCGTTACTCCACAAAAATGTTCTGCCCATTACATATATTACAACAACATCACTAACCAATATTGAAGATGATATTCCACATTCCATTTGA
- Protein Sequence
- MSSFAYFEIIAHLIPPIRPTMEHVLICLNLTAEKMDAINESYISDADGYGVQVRLYIWEGSTAPTNTFPDNLVVQVNAQPCVVPETQQPIDITANLILEQSHNSNKISVKWSSGDSRIFFMSVLLVKKPSVNQMVDLIRNGRIMAAESVQKMFLLDDAVRMTPHMPTMISLKCPVGKKKIQLPCRGLNCSHFLCFDAGAYLEMNERLNTWECPVCHKGAPFEDLVIDGYFYHILNSGLLGNGDFEVLVYKDGSWCAPSSLLHKNVLPITYITTTSLTNIEDDIPHSI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00575250;
- 90% Identity
- iTF_00575250;
- 80% Identity
- -