g3323.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- GATA6
- Assembly
- GCA_009870125.2
- Location
- CM020868.1:27044950-27051177[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 7.5e+03 -3.2 0.4 1 6 492 497 492 499 0.80 2 2 1.3e-17 3.2e-14 52.4 6.2 1 35 542 575 542 576 0.97
Sequence Information
- Coding Sequence
- ATGGTCTGCAAAATTATCTCAACGAATGTCAAGATGCAGCTGAAGATGGAAACGCAGAcaacgcagcagcaacagcagcagcagcaacaattgcaacagcagcaacaccaacagcaacaacagcagcagcagcagcagcaacaacagcaacagcagcaacaacagcagcaggtccAGGTCCTGACCAAGCAGCAGATCCCATTGATAGACAAGATCAAGCTAGAGGCCAGCAATGGAGCCGAGCAACTGAGTCAGCAGACAGCCAGCGCCCTGGAGgagcaacaggaacagcagcagcagcagcagcagcagcaaccagcaacatCCGTGGGAGGAGTCAGCAGTGATCCTGAAGAGCAGTACGTGGTGGTGCCACGCACCCAGCAGAGGCGCATCCTTACCACAGCGGGAACACTagaACTCAACGAAGCTCGGGAGGGAGAGCCCAGCAGTGGGAGCTCTGGTTCCGCCTCGGAGGGGCACATCGTGTACCAGCGCAGCTCGCACCATTCCCCTGGGGCTGCACACGCCACGCACTACGTCCAGATGGCGCCGCGCAATGCCGAGGTGCCAGAGGTGCCATCAGGTGCGCCACCGGGCACCCTCTACGCCTATCCCTCAGGGCAGATCATCTGCAGCGGCGAGGATGTGACGGCCATCAAGATAGAGACCGTCGAGAAGGGCGAGGTGCCAGGGGAGTCGCAGCAGCTGCATtcccaccagcaacagcagcaacagcaattgcaacatcagcagcagcagcagcagcagcagcagcagtgtcCCACCCCCAATGGAGCCGCCTATGGGGAGGCCATTGTGATCAGtcgagaggcagaggcactgcagcatcaccaccagcaacagcagcagcagcagcagcagcaacatcagcagcagcagcaacatccgGCATCAGCGGTGCACATCGCCAGCAGTTCCCATGGCGGTACCGTGCGCTTTGTGTCCGAAGACGGACGCTTCTCCACTGCTGTGCCTGAGGCGTCCGGCTCCACGCTGTACTACGATGTGCCCGTGGTGGATGCCAGTGTCCATGCCAACGAGTCCAAGACGTACGCGGACCTGGGCAACGCCTATGCCTTCCCTCCGAGCTCCAGTTTCACGAGCAACAGCTACGCGGCCACCCTGCAGCAGGGGAACACCATCTACACAGTGCCCGGGGGCCAGTTCTTGGCAAAGTCCGAGGCGAGTCTCAACTCCCTGCGGCAGACAGGACCGACGACCTTTCTGAACCCCTTCCCAGACGGCAGCCAAGCCATCGACCTGTGGACATCGCCCGCTCCGCCAGAGTACCAGAATACACCATTTACTAACTTCCATCCGCAGGTAATGGACGAGTATGCCTCCAGCAACATGACCACCACCCACTGGTCGCCCGCCAGCAGCATCGGGCAGTACGATGGCAGCCTGGTCACAGCCTCCGCCACATCCTCTCCGAACCACGAGCTCAAATGCGAGAGCTGTCATTCGCCGTTCGTCCGCAAGGGCACGGACTTCTTCTGCCCCAATTGCAGCTTCATACGCATGACCCCACGCATGCCCCCGCGGCAGGCGAAGCCAAAGACCCCTGCGGCACCCAACAATCGCCGGAACGGAGTGACCTGCGCCAACTGCCAGACCAACTCCACGACTCTTTGGCGGCGCAACAACGAGGGCAATCCCGTGTGCAACGCCTGCGGCCTGTACTTCAAGCTGCACAGCCTGAACCGGCCGCTCTCGATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCAAAGAACAATGGAGGAGCGCCCATACACAGGCACGCCCAGGCACCACTGCCAAGCATGTCGCAAGGTGTCAATCTGATGGTGAACAACGCCCCTCTGTATCCATCCCAAGTGCCCATGAATATGCTGCACAGCCAGCAGAATGCCAGTCCCGAGCTGCACGACATGTCCACGACGGGACCGGCCGGAGGATCACGTGTGGTGGCCATTCAGGTGCAGAATGCCACGGGTGCAACGCCCAGTTCCGAGGGGACTCTGAATATGTCCGCCCGCCACCATGTGACCGGTGAGAGCCATTCGCCGTACAGCCAGCAGACGACACCGTCGCAGAGTCAGTCGCCGCATTTACCCAGCCCCGTAACCCTCAATCGCCAGATAGTCCAGCCAGTACCTGCCATTGAGAGCGGTCGCAGTtcctccaacaacaacaacagcgaacTCCCACCGAGCGTCATAACGCGCACTGGTTTGCCGGAGCGATCATCGAATAACTAA
- Protein Sequence
- MVCKIISTNVKMQLKMETQTTQQQQQQQQQLQQQQHQQQQQQQQQQQQQQQQQQQQQVQVLTKQQIPLIDKIKLEASNGAEQLSQQTASALEEQQEQQQQQQQQQPATSVGGVSSDPEEQYVVVPRTQQRRILTTAGTLELNEAREGEPSSGSSGSASEGHIVYQRSSHHSPGAAHATHYVQMAPRNAEVPEVPSGAPPGTLYAYPSGQIICSGEDVTAIKIETVEKGEVPGESQQLHSHQQQQQQQLQHQQQQQQQQQQCPTPNGAAYGEAIVISREAEALQHHHQQQQQQQQQQHQQQQQHPASAVHIASSSHGGTVRFVSEDGRFSTAVPEASGSTLYYDVPVVDASVHANESKTYADLGNAYAFPPSSSFTSNSYAATLQQGNTIYTVPGGQFLAKSEASLNSLRQTGPTTFLNPFPDGSQAIDLWTSPAPPEYQNTPFTNFHPQVMDEYASSNMTTTHWSPASSIGQYDGSLVTASATSSPNHELKCESCHSPFVRKGTDFFCPNCSFIRMTPRMPPRQAKPKTPAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHSLNRPLSMKKEGIQKRKRKPKNNGGAPIHRHAQAPLPSMSQGVNLMVNNAPLYPSQVPMNMLHSQQNASPELHDMSTTGPAGGSRVVAIQVQNATGATPSSEGTLNMSARHHVTGESHSPYSQQTTPSQSQSPHLPSPVTLNRQIVQPVPAIESGRSSSNNNNSELPPSVITRTGLPERSSNN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00518107;
- 90% Identity
- -
- 80% Identity
- -