g6178.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- Camta1
- Assembly
- GCA_009870125.2
- Location
- CM020869.1:17708544-17716972[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-41 4.3e-37 126.6 1.4 19 116 25 120 23 120 0.96
Sequence Information
- Coding Sequence
- ATGCGTCTGTGCCACTTGGTGGTTCCTGGCCTGGCCAGCTCGGTTAAGTGTCAACTGCCGGGGCGACACCTCTTTGACAAGCACTGCGAGTGGCAGTCCAAGGAGGTCCGAACCAGACCCAAGAGCGGATCCCTGCTGCTGTACTCGCGGAAGAAGGTGCGCTATCGCCGCGACGGCTATTGCTGGAAGAAGCGCAAGGATGGCAAGACGACGCGCGAGGATCACATGAAACTGAAAGTACAAGGCACGGAGTGCATCTACGGCTGTTATGTACACTCGGCCATATTGCCCACGTTCCATCGCAGATGTTACTGGCTGTTGCAGAATCCGGACATTGTTTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCAGTGATTGCCCCCAGCATCACCCTGTGGGGCGACAAGAAAGAGTGGACCAAGGAGGAACTGGTCAGCCAGCTGAAGCCGATGCTCTCCACAGTCAACTCCGATGATGACTCCGACTCGGGCAACGACATTGAGATATCGACGGCCGAGACCGTGGAATCGATTGTGTGCCAGCTGATGGAGAAGCAGCGCTTGTCCCGCCAGGCGGCCCTCGTCAAGCAGCTCGACTGCGGCTGCGGGGACTCGGGCTGTGCCGACGGCAAGACCTGCACGCATCCCGTGATGCGGCGCACGGGCGGTATCATCAAGTCCGCGGTGGCCACATCGGCCTCAGAGAAGCGACTCAATGAGGGGGCCTTCAACGGCGGCACGCCCAATGTGGTGGTGGCCAGCAAGCTATACTCCCGCTGGGCGGAGCGGCCGCGCCAGCGCAACGATGGCATGCACCTGGACAACCCGCACGCACAGTTCCACAATGCCACGCAACAGCTGCCCCAGGAATCGGCCATCAAGTTTCAGATCATTCCTcctcaacagcagcagcagcagcaacaacagcaacaacagacgGGACATGGCGATGGCAGCTATCAGCAGCAATATCGTGGTGCCAATCAGATGCTGGCCGCAAGAAGCAATCTGgtgatgcagcagcaacagcaacagcagcagcaatatcaccagcaacagcagcaacacttGAGTCTGCAACGATTCGTGGCCAccatagccacaacCACGTCCATGGCCgcatctatatctatatccaCATCTACGTCCGGCACATCGTCCACCTCGAGTTCCTTACAATCGATTATCGATGGcaatcagcagcaacaaattacAACGACATCGACGGCAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCACTGAGCTGAATggagggagcagcagcagcagcaacaatcagGCCACAGATGGCCACAACAAGAGTCAATCCCAATCGCAGTCTCAGCCTCAAACTCTGAGCCAAAATGGTTGTGCAACATTCAGTGCTTCCAGTGATAATAGCAGCCAAATTAGCGCCAGCGACGAGAGTAGCAGCTTTGGGGCCAACAATCAGAACAACAGCATACACAGCAtccacagcagccacagcagcagcagtaacagcagcgAGGACGAGCCCCAGGCGGGCAATGCTGCCGAGACCCTGAGCTTCTTCAACGAAACCCTGGATCTATCCCATGAGGATATTCAACGTACACTGATAGCCAATATGCAGCCGTACAATACGGCTGCAGgcgaagcagcagcgacaacgaTAGAACCTTTGGCAACAAACGGCAGCCacagtagcagcaacagcaatggcaATCCTCAAGAAGTGGAGAAGAAACCTTCAGTCGGCCAGGAAGTCGAAGCCGAACCTGAGGAGGATGACACAGACGATGTGTTTGCCAACCTGGATGCCTTCGATATGCTCGTGGAGTTCCCCGAGCTGGATCTGGATGATAAGCAGGCCCTGAACAACACGGCCTTGGAGCAGGGCTCCTATCTGGGACAGGCGGCCGCCCAAACGCAGCAGCCCCGCAAGATCCACAACATCTGCGACTTCAGTCCGGAGTGGTCGTACACCGAGGGCGGAGTCAAGGTACTTGTGGCCGGACCCTGGACGAGCAGCAATGGTGCTGGTGCCTACACGGTGCTCTTCGATGCCCAGCCCGTGCCCACGCAGATGGTGCAGGAGGGAGTGCTCCGTTGCTACTGTCCTGCCCACGAGGCCGGCTTTGTGACGCTCCAGGTGGCCTGCGGCGGCTTTCTCGTGTCCAATTCGGTCATGTTCGAGTACAAGCTGTCGCTGCTGGCCGATGCCCCGTTCGATGCGAGCAGCTCCAACGATTGCCTGTACAAATTCACGCTGCTCAATCGCCTCTCGACCATCGACGACAAGTTGCAGCTGAAGACGGAGCAGGAGCCGACGACGGACCACACGGCTCTCTATCTGGAGCCGAACTTTGAGGAGAAGCTGGTCGCGTACTGCCACAGGCTGACGAAGCATGCCTGGAGCATGCCCAGCACAGTGGCCAGCTGGAGCGTGGGCCTGCGGGGCATGACGCTGCTGCATCTGGCCGCCGCCCTGGGCTATGCCAAGCTGGTAGGCGCCATGCTCAATTGGCGGGCGGAGAATCCACATATCATACTCGAAACGGAGCTGGACGCCCTCAGTCAGGATGTGTACGGTTTCACGCCGCTCGCCTGGTCCTGTGTGCGCGGCCATGTGGAGTGTTCCCTGCTGCTCTACAAGTGGAATCACAATGCGCTGAAGATCAAGACGCAGAGCCAGCAAACGGCCCTGGATTTGGCCAACCTGAAGGGGCACAAACATCTCCTGGCCCAGATATTTCGACTGGAGAAGGAGCGCTGCCGCAAGCCGCACTTGCGCGGCGGCCTGGCCAATCTTTCAATGAACCTAGGCGTTGAAACGGAAGCGGAGGAGTCGCCGCCGCAGACCTACAACAGCTTTGACCTGGAGATACTCCAAAGAAAGCACGATGGCGTCTTCCTCAGACCTGGGGCAGTGCATAGCAATCAAAGTCCTCCCAACAATGGCAGCAGGTACTCCAAGCGCTCTTCCATAGACAGCGGCATCAACATGGACATACGCAGCAAGTCAGGCAAGTCCCTGGCCAGGCTGCACAGCAACTTTGAGGGGCACGACAGCTATGCATTGGGAGTGGACTCGCCGCTGGATACGCTGACTGGGACCAATTGCCTGCTCTCACCGCTACGTAAAATGGATTTCGCCCTGTGCGAGGTATCCACGGGCGAGTCGAGCCCCATACACGACAAAGACATCGATGGCGATGACACCTCGACGAGCGCCACCGATGTGACCATAGGCAATgacctggccctggccctggccgaTGCAGTTGTAGGGGACTCGGATGCCAAAGTGCTGACCCTGGCCGAACACATTATAGCAGCAATGCCAGAGCGCATCAAAAATGAAGCCGATGAAATGATGGTGCTGGGCAGCCCCTTGACTGAGCCactgacctcggagtcctcgGCCCTGACAGACAGCTTTATGGATCCCCTGCTGGACTCGCTGCCCAATACGCATTTCGACAGCGACTTCAACTTCGACTTCCACGACCACAGCTATCGGTACCACGATGTGAGCACTCCCTGCTCCAGCCTGAGTCCCGCCAGCTCGGGGCCGCTGCAGTCGCCGGCCAGCTACTCCATACTGGGCACAGATCCGTCTGTCAGCTCGCCCAGTCCGCCGCCGTCGACCAAGCAGCTGACCGAGTTCCTGCACGCCTCCAGCCTGTCGCAGTATCCGTTCGAGGCGGACTTCTCCAAGCTGACGCTGACCGACACGGAGCAGCGGGAGCTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTACCGCTCGTACAAGGGCCGGCAGAAGCTCGAGGAGCAGAACAAAGAGCGCACTGCCGCCATTGTCATCCAGAACTATTACAGGCGGTACAAGCAGTACGCCTATTACAGGCAGATGACCAACGCCGCCCTGGTCATCCAGCATGGCTATCGTTCCTATCGAAAGAACAAACGCTTCAAGAAGAGCGGCCTGGGCCAGGGCATGGCAGGGGGCAGCGATCACGGCAGCGTCAGCAGCAACTCTCAGTGCCTGTCCAGCTTCTACGACCACTACAAGcaggatcagcagcagctgcagcagcagcatgagATGGGCTCGCAGCCGAGCACGCCCAAGGAAACCAGTCCCTCGGGTCCCTTGAAACGAACCTACTCGCAGTCCACCCAGAATCAAGCTGCCAGGAAGATCCAACAGTTCATGAGACAATCACGCATCAAactacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATCTTGGCTTGCCTAGAAAATAACAGTTCTGCCcagagcagtggcagcaacaccTATACGAACAGCATCAACAATCTACAATCCAATCAGTGA
- Protein Sequence
- MRLCHLVVPGLASSVKCQLPGRHLFDKHCEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDSGCADGKTCTHPVMRRTGGIIKSAVATSASEKRLNEGAFNGGTPNVVVASKLYSRWAERPRQRNDGMHLDNPHAQFHNATQQLPQESAIKFQIIPPQQQQQQQQQQQQTGHGDGSYQQQYRGANQMLAARSNLVMQQQQQQQQQYHQQQQQHLSLQRFVATIATTTSMAASISISTSTSGTSSTSSSLQSIIDGNQQQQITTTSTAATCDNLMSANALTELNGGSSSSSNNQATDGHNKSQSQSQSQPQTLSQNGCATFSASSDNSSQISASDESSSFGANNQNNSIHSIHSSHSSSSNSSEDEPQAGNAAETLSFFNETLDLSHEDIQRTLIANMQPYNTAAGEAAATTIEPLATNGSHSSSNSNGNPQEVEKKPSVGQEVEAEPEEDDTDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSYLGQAAAQTQQPRKIHNICDFSPEWSYTEGGVKVLVAGPWTSSNGAGAYTVLFDAQPVPTQMVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDDKLQLKTEQEPTTDHTALYLEPNFEEKLVAYCHRLTKHAWSMPSTVASWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWSCVRGHVECSLLLYKWNHNALKIKTQSQQTALDLANLKGHKHLLAQIFRLEKERCRKPHLRGGLANLSMNLGVETEAEESPPQTYNSFDLEILQRKHDGVFLRPGAVHSNQSPPNNGSRYSKRSSIDSGINMDIRSKSGKSLARLHSNFEGHDSYALGVDSPLDTLTGTNCLLSPLRKMDFALCEVSTGESSPIHDKDIDGDDTSTSATDVTIGNDLALALADAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFNFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSLSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRKNKRFKKSGLGQGMAGGSDHGSVSSNSQCLSSFYDHYKQDQQQLQQQHEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEILACLENNSSAQSSGSNTYTNSINNLQSNQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603331;
- 90% Identity
- -
- 80% Identity
- -