g11314.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- DNAJC1
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:9807825-9809596[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6 8.1e+03 -2.8 0.2 6 18 28 39 25 45 0.58 2 3 9.6e-08 0.00014 22.1 0.0 4 38 307 344 304 345 0.86 3 3 3.3e-08 4.7e-05 23.6 0.3 3 43 411 456 409 458 0.89
Sequence Information
- Coding Sequence
- ATGAAACTGCCAATGGACACACTGGTACTGCTGCTGGGCGGgtgcctgctgctgatgtgCGGCACGGCCCGGGCCTGGCACTCGGAGGAGCTGGAGATCTTCGATTTGGTGGAGGAGATCAACAAGAACTTCTACGAGTTCATGGGCATCAATCAGACTGCCACCAACAACGAGATCAAGCGCGCCTTCCGCACCCTCTCGATTGTTCTGCATCCAGACAAGAATCCGTCCGAGGACGCGAACATCCAGTTCCGGAACCTCGTCTCCATCTACGAGGTGCTGAAGGACTCGTCCAAGCGGGAGAAGTACGACAAGGTGCTCAAGGAGGGCATGCCCAATTGGAAATCGGCACTGTACTATTACCGCCGCATGCGCAAGATCGGCTTGTACGAAGGCGCCTTCATCCTGTTCCTGATCATCACCGTTGGCCAGTATCTGTTCGCGTGGGCCGCCTACCTCGAAAAGAAGTACACCGCCGAGCAGGTGTTCGGCACCAAGCTGAAGAAGCTCCAGAAGAAGAATAAAAATATCGACATGGATGTGATCCTCAGCGAGATCCCCATGCCGTCGCTGCTCAACACGCTGCCCATCCAGATACCAGTGGCCATCTGGAATCTACCGAAGACCATCAAGAATGGCTTCAGCAAGGCCAACGAGCTCAAGGAGCTGGCCCTGGAGAAGCGCAGACAAGAGCTCGAGGCCGCTCGCCGccaggaggagctggagcgcGAGGCCGAAGAGCAGGCCCGCCTGCGCAAGGAGCAAAAGGAGAACCTGCGCAAGCGCAAGCAGAACACCAAGGCGCCGGAGAAGACCGAGGAGGAGTTGCGCGGCTATTCCCGGATCAATGCCCGACAGCTGAACGAAGAGGATGGCATGCGTCCCGCTGCCCAGAAGAGCACTGTGAGCGGCGGCTTCTGGACCGACGAGGATCTCACCGAGCTGATACGCCTCGTGAAGAAGCACCCGGGTGGTGCGGGCAGTCGCTGGAACACCATTGCCGAGTCCATGAACCGCTCGGTCCAGGAGGTCACCTTCATGGCGGCCAAGATGAAGGAGAACGGCTACCGCATACCCGGCCAGACGGAGAGCGTGGCCGAGAACCTCGTTCAGGAGTCACAGGAGGCGGTCCGGAAGGAGAAGGTGAAGAAGTCCGCATCCGTGACTGCTACTGCCGCCCCAGGCACTGTCACTAGCAGCAGCGAGAAAAGCATGCTGATACCTGAGACCAACTGGacgcaggagcagcagcgcgCTCTGGAGGCGGCCATCGTGAAGAACAGGAAGGCGGCCAGCGGCGATCGCTGGCAGAAGATCGCCAACAGTGTGCCGGAGAAGACCAAGGAAGAGTGTCTGGTGCGGTACAAGTATTTGTGCGAGCTGGTCAAGACCCAGAAGCAGGCCGAGGAGGCGGAAGCCGTGGCCAATGCAGAACTGGACAATCCGCCCAACGAGGAGGGATTGCCCGAGGAGCTGCTTGCCGAAGAGGTGGAGGCCCCGGCTGCAGCGACAGCGGTGTCCAAGAAGCTCAGCAAACGCGAGCTGCGGCGTCAAAAGCAGAACTACTCCACCAGCGATGATTCCGACGCGGATGCATATCAGTACGAGATAAGCTAG
- Protein Sequence
- MKLPMDTLVLLLGGCLLLMCGTARAWHSEELEIFDLVEEINKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDSSKREKYDKVLKEGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPVAIWNLPKTIKNGFSKANELKELALEKRRQELEAARRQEELEREAEEQARLRKEQKENLRKRKQNTKAPEKTEEELRGYSRINARQLNEEDGMRPAAQKSTVSGGFWTDEDLTELIRLVKKHPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQTESVAENLVQESQEAVRKEKVKKSASVTATAAPGTVTSSSEKSMLIPETNWTQEQQRALEAAIVKNRKAASGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKQAEEAEAVANAELDNPPNEEGLPEELLAEEVEAPAAATAVSKKLSKRELRRQKQNYSTSDDSDADAYQYEIS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_00480793;
- 80% Identity
- -