g3112.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- snpc-4
- Assembly
- GCA_009870125.2
- Location
- CM020868.1:25131717-25134107[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-08 4.7e-05 23.6 0.0 1 38 233 271 233 274 0.96 2 4 1.7e-07 0.00025 21.2 0.1 2 42 289 333 288 337 0.82 3 4 1.5e-06 0.0022 18.2 0.0 3 46 345 389 343 389 0.93 4 4 1.9e-09 2.8e-06 27.5 0.0 2 43 396 438 395 441 0.95
Sequence Information
- Coding Sequence
- ATGGATGTCGAGAACCTGCTTAGTTTGAACCCCAATCAACTGCTGGCAGAGATCACATCGCTGCTAATAGCCACCTCAGAGCCGAGCGAGACCAATGCCCTGCTGCTCAACCATGAGCTGCAGCGACGCCTGCACCAAGTGCGCGCAAAGGTTCTAGCGTTGCTGAAATCTGTCCGGGCTCGATATGCACGGAACGAGGAGATTTTAATCCGCCGCCTAAAGCCGCGCACCCAATGTAACAGCAGGCTTAATAAGGGAAGCACTGAAATGTATGGAATATGTGGAGCGATCCGCCGTGGAGCCACCTTCCACTTCAagggaaatttgtattttcGAGATATTGATGGACGCAGTTGTCCGAATAACGAGGACTACGAGGCGCGTAGTCACACGGAGATGTTTCCCTCGGACTTCGATATGCGCTCCAAACACGTGTGGACTATTCTGGACAAGAAGAATTTGATTATGGGCATCAAGCAACAGCTGCTGGACCATGCCGCCTGTGAAAAGGCTCCAAGCTCTCTCAAGCGAAAGCCCATCGAGCGACATGTTCGCTCTCTGGCCAGTCTGCTGGCCAACGCCGACAGCAGCTTTAGCATCGACTGGACCCAGATCAGTACTCTGGACTTGGAGTTCCGTCATTCTACCTACAGCTCAGAGGCAATGTGGCGCGTTTATCTACATCCGCAGCTGAGCCGCGAGGACTGGAGTGCGTCGGAGGACGCAGCTCTGGTGGCGGCGGCCAAAGCGAATCACATGCAGAACTGGGAGAAGATAGCTTCGGCGTTGGATCGGCGATCGGACTATCAGTGTTTCGTGCGTGTCCTGGTGGCGTTCCGTCACCACCTGGAGCCATCGTCCAGTGTTCGATGGACCGAGAAGGACAATGAGACACTAAAGCGTCTTGTCGAAATGAATACTGTGAATGGCCAGATCAATTGGCAGCGGGTGTCGGAACACTTTCCCGGCAGGTCCAAGTCCACTCTGATCGGACGCTATACGTATACGCTGCATCCAAGCATCAGCCATGCACCCTTCACCACGACGGAGGACATAATGCTCTTTGCTGCCGTGGAGGAGTACAATGGTAAATTCAATAGCTTTCCCCGCACTCTGTTTCCCAACCGCTCGCTGGCACAGCTCCGTACCCGATACCACAATAACCTCGCCCAACGCACCAAGACCGACCCTTGGTCGGTGCTGGACGACACCAAACTGATGGATTTTGTCACGGAGCACGGGGCCGCTCAGTGGGTGAACTGTGCTGCGCATCTTGGAAATCACACTCGGACCAGTTGCAGGACGCGTTTCTTGGTAATAAAACGCTTCCTAGAGCAGCATCCTTCGGCCACGGTCGCAGACTTTCCGCGCCGAAGgtgttttaaaaataaaaacaatatcGTCACGGCTGACAATTGGGCGGAGTGTCTGGAAGTGTGGCAGCAGGATCCTGACTCCATCGATCCGCCGAAGCATCAAACGCGTCCATCGAGAGCAGGGGAGAGAAGGAGCTCTAACATAAAAGTCGGGCCCAGCGAAATAGATGTGCAGGTCTATGAGTACTTCAAATATAGCTACGATCTTCAACTGAGGGCATCACCGTCGTTGGAACACTTTTCGATACCCAAGGATGCCTTGAATCTCGCATATGTGATCGAGGCGTTAAACTACAAGCCACCAGCGGCCAAGAACTTTAAGCCCATTCAGAGCGTTTCAATGCCCCTGAAATTGTGTAGTTCCTACAACCAATTGCTCAAGAcgctgccaaaaaaaaaggaccAAAATCCATCCCAGGACTCGCTACTCTTGCCCCCCAACTGGTCAACGATGATGGGATTCCGTGCCATTTGCATATTATCCGGCGACAGTGGAAAGCTCTCCCCCGCTGAGTCCCCAGCCTACGACGAGTCCTCGCCGCACATCCAGCAATTCCGGCACCGTCTGCGAGCCCTGTTTTATCGCACCATTCTGCTGAGCCGACTTGAAACGCATCTCTTCGATGAGCTGCCCTCTCACCTGATGGCCTTGCCAAGACCTTTGGCCAACTACATTGAATCCGGGGCACGATCGACGCAGGAGGAACTGAGCAGACAAATTGCAGTCAAGCAAATGGCACATGTCAACCGATTGGCTGAGCCACAGAGGAAGAAACCGAAATTGGAGCCCCTCAGCGAAGATGAGGGGATGAGCttcaaggaggaggaggacttcTTGCCTTTATAA
- Protein Sequence
- MDVENLLSLNPNQLLAEITSLLIATSEPSETNALLLNHELQRRLHQVRAKVLALLKSVRARYARNEEILIRRLKPRTQCNSRLNKGSTEMYGICGAIRRGATFHFKGNLYFRDIDGRSCPNNEDYEARSHTEMFPSDFDMRSKHVWTILDKKNLIMGIKQQLLDHAACEKAPSSLKRKPIERHVRSLASLLANADSSFSIDWTQISTLDLEFRHSTYSSEAMWRVYLHPQLSREDWSASEDAALVAAAKANHMQNWEKIASALDRRSDYQCFVRVLVAFRHHLEPSSSVRWTEKDNETLKRLVEMNTVNGQINWQRVSEHFPGRSKSTLIGRYTYTLHPSISHAPFTTTEDIMLFAAVEEYNGKFNSFPRTLFPNRSLAQLRTRYHNNLAQRTKTDPWSVLDDTKLMDFVTEHGAAQWVNCAAHLGNHTRTSCRTRFLVIKRFLEQHPSATVADFPRRRCFKNKNNIVTADNWAECLEVWQQDPDSIDPPKHQTRPSRAGERRSSNIKVGPSEIDVQVYEYFKYSYDLQLRASPSLEHFSIPKDALNLAYVIEALNYKPPAAKNFKPIQSVSMPLKLCSSYNQLLKTLPKKKDQNPSQDSLLLPPNWSTMMGFRAICILSGDSGKLSPAESPAYDESSPHIQQFRHRLRALFYRTILLSRLETHLFDELPSHLMALPRPLANYIESGARSTQEELSRQIAVKQMAHVNRLAEPQRKKPKLEPLSEDEGMSFKEEEDFLPL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00474432;
- 90% Identity
- iTF_00517638;
- 80% Identity
- -