g4892.t5
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- kn
- Assembly
- GCA_009870125.2
- Location
- CM020869.1:8615971-8638822[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-234 3.2e-230 765.5 0.0 41 385 95 467 81 469 0.99 2 2 2.3e-07 0.00092 17.8 15.0 422 522 470 570 467 587 0.71
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGAGTTGCCCAAATCGAAAGCGAGATGACAGCGGGCTTTGGCCATTCAGCGGCGGCAAATCAACAatcgcacacgcacacacacacgcacatccAACACAATCACACGCAAAATCACAATCACACTCTCAATCACAATCAAAGTCAGAGTCTGAATCAGAATCAGACGCTGCAGCGAGCCGCAGACAATCTTAACCTCCATCTTAATCAGGATCATAATCACAATCAAACGCAAAACAATCCAAAAACAATGCGCTGTGAAACGAGCCTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTACGTAAATCGAACTTCTTTCACTTTGTGATCGCCCTGTACGATCGGGCCGGCCAGCCCATCGAGATCGAGCGCACGGCCTTCATTGGGTTCATCGAGAAGGACTCGGAATCGGATGCCACCAAAACCAACAACGGGATACAATATCGCCTGCAGTTGCTCTATGCGAATGGCGCCCGCCAGGAGCAGGACATATTCGTGAGGCTGATCGATTCCGTGACCAAGCAGGCCATCATCTATGAGGGTCAGGACAAGAATCCAGAGATGTGTCGGGTCCTGTTGACGCACGAAGTCATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGCAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTTCTTCCTGAAGTTCTTCTTGAAGTGCAACCAGAACTGCCTGAAAAACGCTGGCAACCCGCGGGACATGCGCAGATTCCAGGTGGTCATCTCCACACAGGTGGCCGTGGACGGACCCCTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGGCTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCCCTGCCGGTGGCCACGCCCTGCATCAAGGCGATCTCCCCGAGCGAGGGCTGGACCACGGGCGGCGCCACAGTCATCATTGTGGGCGACAACTTCTTCGACGGCCTCCAGGTGGTCTTCGGGACGATGCTCGTGTGGAGCGAGCTGATTACCTCGCACGCCATCCGCGTCCAGACCCCGCCCAGGCATATACCCGGCGTCGTCGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTCGTCTATGTCTCTCTCAACGAACCCACAATCGACTACGGATTCCAGCGCCTGCAGAAGCTCATTCCGCGCCACCCCGGCGATCCGGAGAAGCTGCAGAAGGAGATCATATTGAAGCGGGCCGCCGACCTGGTCGAGGCCCTCTACTCAATGCCCAGATCTCCGGGCGGCTCCACCGGATTCAACTCCTACGCCGGACAGCTGGCCGTCAGCGTCCAAGACGGCACCGGCCAGTGGACCGAGGACGACTACCAGCGCGCCCAGTCGAGCAGCGTGAGTCCCCGCGGCGGCTACTGCAGCAGCGCCTCCACCCCCCACAGCTCGGGCGGCTCCTACGGCGCCTCGGCCACCACAGCGGCGGTAGCAGCCACGGCCAATGGCTATGCGCCCACACCCAACATGGGCACCCTCTCCTCCTCGCCGGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCATCATCATGTGGCCGCCGCCCATCCGCACCACTATCCGCATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MFAPRRSARVAQIESEMTAGFGHSAAANQQSHTHTHTHIQHNHTQNHNHTLNHNQSQSLNQNQTLQRAADNLNLHLNQDHNHNQTQNNPKTMRCETSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASATTAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHVAAAHPHHYPHPHQPWHNPAVSAATAAAV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580491;
- 90% Identity
- iTF_00580491;
- 80% Identity
- iTF_00580422;