g8716.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- Kdm5
- Assembly
- GCA_009870125.2
- Location
- CM020870.1:16607670-16613519[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-26 4.2e-23 81.7 0.1 2 89 227 310 226 310 0.95
Sequence Information
- Coding Sequence
- ATGTCCGCCAAAAGCGAGGCGGACAATACAACGGCCGCCAGctccggcggcggtggcaacagtagcagcagtggcggcggcggcgtcggtgGAACGGGCAACACATCCTCCTCGAATGGAACCGCCACACCGGCGCGTCGTCTTCGCACACGCAACTCCACGGGCAATGGTCCGGCGAGCGGCAGTGAATCCGGCAAgaaatccaatccaatcgatGAACCCTCAACTCCATCTGCTGCTTCTTCGGCCGCCAGTGGCCATGGCCCATCACCGGCTGCGGCATCGGAGCGTCCCATGCCGAGCGTTCCCATGAATCATGCCAGCAGCAGTGTATCGGCGAGCAGGAAGTACCACAACAGTTGTCCCCATCCCACGCCCACAGTGCACAAGAAGACGGTGCACACGCAGCCGCACAGCACCAATAAGTTTGATCAGGGCAAGAACGAGGAGTTCCACTTTGATACGCCGCCCGAGTGCCCCGTGTTTCGGCCGACGGTTGAGGAATTCAAGAATCCGCTGGCCTACATCAGCAAAATTCGTTCGATAGCAGAGAAATGTGGCATTGCCAAGATCCAGCCGCCGTCGACATGGTCGCCACCGTTTGCCGTGGATGTGGACAAGCTGCGTTTTGTGCCGCGTGTCCAGCGGCTGAACGAGCTGGAGGCCAAGACCAGGGTCAAGCTTAATTTCCTGGATCAAATCGCAAAGTTTTGGGAGCTGCAAGGCTCCTCCCTCAAGATCCCGATGGTCGAGCGCAAGGCCCTCGACCTGTACACCCTTCATCGCATTGTCCACGAGGAGGGTGGCATGGAGCAGACCACCAAGGATCGCAAGTGGGCAAAGGTGGCCAATCGTATGCAATATCCATCCAGCAAGAGTGTTGGAGCCACCCTCAAGAGCCACTACGAGCGCATTCTCCATCCCTTCGAAGTGTATACCTCGGGCAAGGTTCTGGGccctgctgcagccgctgccgcagcaacaggcagcgGCACACCCACTCCCGTGAAGCTCGAAGATGGGGGCACCGAGTACAAGGCCCACGAGATAGCCACCCGTCAGCAGATCGCGCCGCCCAACGAGACGAACACACGCCGCTCCAAGCGCTTTGGCAACTCTACTGCCAGCTGCGGCTTAACAGGCGCCGCATCCGGTGGCAAGGATGGGTGTCCGGGTGGTGTGGTCATCAAAACAGAGACAAAGGAGGATTTCAAACGCGATCTTCTGAGCAGTTTCAATGCCGTGCAAGGCAGTGgcactcctgctgctggcggcactCCGGCTGGCCGCGGCGGCGCCAAGAAGACCAACAACGAACCAACGCCGGCAGCACCGCCACTCATTGATCCACTGATGAAGTACATTTGCCACATCTGCAATCGCGGAGATGTGGAAGAGTCTATGCTTCTGTGCGATGGCTGCGACGACAGCTACCACACGTTTTGTCTGCTGCCGCCCTTGACCAGCATACCCAAAGGTGAATGGCTTTGTCCGCGCTGTGTCGTTGAGGAGGTGAGCAAGCCCCAGGAGGCCTTTGGCTTTGAGCAGGCCGAAAGGGAGTACACGTTGCAGCAGTTTGGCCAGATGGCGGATCAGTTCAAGCAGGAGTACTTCCGCAAGCCAGTGCATTTGGTGCCCACCGAGTCGGTGGAGCGTGAATTCTGGCGCATTGTCTCCTCGATCGATGAGGATGTGACCGTCGAGTATGGTGCCGATTTGCATACAATGGATCACGGTTCGGGTTTCCCCACCAAGAGCTCGCTGTATTTGTTGCCGGGGGATCAGGAGTATGCCGAGTCCAGCTGGAATCTGAACAATCTGCCGCTGCTCGAGGATTCTATTTTGGGGCACATCAATGCTGATATTAGTGGCATGAATGCCCCCTGGATGTATGTGGGCATGTGCTTTGCCGCCTTCTGCTGGCACAACGAGGACCACTGGAGTTATTCCATCAATTATTTGCACTGGGGCGAGCCGAAGACCTGGTACGGCGTGCCCGGTTCTTGTGCCGAACAATTTGAGGAGACCATGAAGCGGGCAGCCCCCGAGCTGTTCTCCTCCCAGCCCGATCTGCTCCACCAGCTGGTGACGATCATGAACCCGAATATATTGATGAACAACAGGGTGCCGGTCTTTCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACCTTTCCGCGGGCCTATCATGCGGGCTTCAATCAGGGCTATAACTTTGCCGAGGCGGTTAATTTTGCGCCCGCCGATTGGCTAAAGATGGGCCGTGAATGCGTCAATCATTATTCCATGCTGCGTCGCTTCTGTGTCTTCTCCCACGACGAGCTGGTGTGCAAAATGGCCTTGGAGCCGGCCAAACTGACGTTCGGGATAGCCACCGCCTGTTACATCGACATGGCCGAAATGGTGGACACCGAAAAGAAGCTGCGCAAGTCCCTACTGGAGTGGGGCGTAACGCGTGCCGAGCGTCGCGCTTTCGAGCTGGTTAACGATGACGAGCGGCACTGTCAGGAGTGCAACACCACGTGTTTCCTTTCGGCAGTGGCCTGCGAGTGCAACGACAAGCTGATTGTTTGTCTGCGCCACTACACCGtcctctgtggctgtgcccCGGAGAAGCATACACTCATCTATCGCTACACCCTCGATGAGATGCCACTGATGCTGCAAAAACTAAAAGTCAAGGCGCACAGCTTTGAGCGTTGGCTGTCGCGTTGCCGGGACATTGTGGATGCGCACACACCCACCTCGGTGACACTCACCGAGCTCCAGGATCTGTGCAAGGAGGCGGAGACCAAAAAGTTTCCATCTTCGTTGCTGATTGATCGCCTGAATGCAGCGGCCATCGAAGCAGAGAAATGCGTCACAGTCATCCAGCAACTGGGCATCAATAAGGTACGCACTCGGTCGGATCACAACCAGGAAGCAGCCCAATACAAGCTGACTATGGAAGAGCTCGAGCTGTTTGTCCAGGAAATTGATAATCTGTGCTGCATCATCGACGAGGGGACCTCGGTGCGGGAGCTGCTCGTTTTGGGCAAGCAATTTGTGGACCGTGCGGAGGCGCAGCTGCAGCTAACGCTGGAAGCGCTCGAGGAGAACGAACTGGAGACTCTGATCAGTGAGGGCAGCTCCCTGAGGATTGAATTGCAGCAGCTGGATCTCCTCCAGAAGCGTCTGAAACAGTGCAAGTGGTACAAACGCTCGCAGGGATTGAGGGAGACCAGCTCCAAGCTGACGTATCAGGATGTAAAGAACCTCCTGCATATGGCAGCGGCAGATTTGGATCCCACAGATCCCTATGTGGACAAGGAGATGCGCAAGCTGCAGCAGATCGGGGCGGACATAGAATCGTGGGAATCGCAGGCGGCCAAGTACTTCCGCAGATTAACGCAACAGCACGAACTGGCGGAAATTGAGCAGTTCTTAAAGTCCGCTAGCGAGATTAGCGGCCAGGTTCCATCCCACAGTCTGCTGAAGGACGCCCTGCGCAAGGCGAGGGAGTGGCTGCGGGCCGTGGAACAGCTACAGCAGAACAATCATGTCACCTACTGTCACACGCTGGAGAATATGATTGAGCGGGGGCTGAATATACCCATTCAGTTGGAGGAGCTCAGCCGCATGCAAGGCCATCTGTACAGCGCCAATCAGTGGAAGGATAATACTGCGTGCGCATTTCTGAAGAAGGGCACCTTCTATACGTTGCTCGAGGTGCTGATGCCTCGGTCGGATGCCATCAACATTGACTCGGATCTCAAGCCGCGCTTCCAGGATGACTTTCTGAAGGAGAAGAATCCGGCGGAGATTGTCGACAGTTTTAAGCATgccgaggagcaggagctgcttGATATGCGCGACCTGCGGCGACAGAACATGACCAAGAACCCCCTGCGGGACATGTTCTGTCTGTGCAAAGCCGAGTTCCGTGGCCTCATGTACAATTGTCAGTTGTGCCGCGATTGGTTCCACGAGGACTGtgtgccaccgccaccgtcgGCATCGAGTCAGAACGGCTTGCTGaatggaggaggtggaggcgccGGAATGGTGCCGCCCACGAATCGGCCCAAGTGGCTGTGCCCCAGCTGTGTGCGCTCGAAGCGGCCACGCCTGGAGACCATCCTTCCATTGCTcgtccagctgcagcagctgcctaTCCGTCTGCCAGAGGATGAGGCTTTGCGTTGTTTGGCGGAGCGTGCCATGAACTGGCAGGACAGGGCCCGCAAGGCGCTCAGCAGCCCCGATGTGAGTGCGGCCCAGGAGGCGATCCTTGCTCAACAGCAAAAGCGTCGCTCGGAGGGTGGTGGCATCGGTGGCGGTGTTGTGGGCAACATCAACAGTCCGCGCAAGCCCCGTCGTCGTGGCAGCATGGCCAAGGAGGCCAGCGGGTCCACAGAGTCGGatgccgatgatgatgacgatgatgacgagtGCCGTCTACGGATCGTCGAGGACGGCTTTAGTAACGATGAGGATGAGCTGCCCCGCCCTGCAACGAACACCGAATCAAATACCGATCTCCTCAAGCTGCTGTCCGATAGCGAAATTGAGAATCTACTAGATCTAATGATGGAGGGGGATCTCCTCGAGGTCTCGCTCGACGAGACGCTCGAGCTGTGGCGCATACTGGAGACCATGCCGCCGACAATGCTGCAAGCGGAAGCCAATAGCCGTGTGGCGCAGTACTTGCAGCGCCAGCGACAGCAACCGACATCTCTGCCGCCCACATCCTCCAGCATTCACTCCGGCGCCGAGGACTCCAACGACAGCCTCCTGGTACAGAACAgtcccaacagcaacagcaataataGCAGCACGACGGCAACAAACACCCCCAACAACGGACGCAACAAGAAGAGGCGTTCGAATGATGCCAGCGGCAATGCGGCTGTACCTCGAAAGAAACAGAACACGCCCAAGCAGACGCCCAGCAAGAAAAACGCAGGCGGAGGAGCGGCTGCCAATCGTAAGAGTGACGCCAAGACGACGCCCgccgcagcggcggcggcaacgacACCTGGAGCGGATGCCGATGCAGAAAATAAGCAGGCGAATGGCGGCAATACCAACTCAAATATATCGCCCATTGCGGCTGGAGTAGGCAGCGGTTCGaccacacccacgcccacagcCACGCCTGGTTCGGCGCACAAGAAACGTAAGCGCACTTCCACCAATAACAAcagtagcaacaacaacaacaacaacaatagcaacagcagcaacaccaacaacaccaatagcaacaccaacaacaacagtacgAGCACTCCTAGTGGAACACAGGCAACGACACCGACAGCAACCCCAactggtggtggcggtggaggtggCGGTCAGAAGAAACACGCCCAGCGCAACCAACAGGCAGCGCAGGAGGATGACGAGGAGGAATGCAGGGCGGAGAACTGCCATAAGCCGACGGGGCGGGAGGTGGACTGGGTGCAGTGCGACGGAGGGTGCAACGAGTGGTTTCACATGTACTGTGTGGGTCTCAATCGCAGCCAGATCAAGGCCGACGACGATTACATTTGTATACGCTGCACGAAGACCGTCACCGTGGCGGTGagcagtagtagtagtagtaatCATGGAATGGGagcgacaacgacgacgatggcgaCGACGGGCAAGCAGCGGGCAGTGCAATCGGCGCGGTAG
- Protein Sequence
- MSAKSEADNTTAASSGGGGNSSSSGGGGVGGTGNTSSSNGTATPARRLRTRNSTGNGPASGSESGKKSNPIDEPSTPSAASSAASGHGPSPAAASERPMPSVPMNHASSSVSASRKYHNSCPHPTPTVHKKTVHTQPHSTNKFDQGKNEEFHFDTPPECPVFRPTVEEFKNPLAYISKIRSIAEKCGIAKIQPPSTWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVHEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKSHYERILHPFEVYTSGKVLGPAAAAAAATGSGTPTPVKLEDGGTEYKAHEIATRQQIAPPNETNTRRSKRFGNSTASCGLTGAASGGKDGCPGGVVIKTETKEDFKRDLLSSFNAVQGSGTPAAGGTPAGRGGAKKTNNEPTPAAPPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTESVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLTELQDLCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGTSVRELLVLGKQFVDRAEAQLQLTLEALEENELETLISEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAAADLDPTDPYVDKEMRKLQQIGADIESWESQAAKYFRRLTQQHELAEIEQFLKSASEISGQVPSHSLLKDALRKAREWLRAVEQLQQNNHVTYCHTLENMIERGLNIPIQLEELSRMQGHLYSANQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRFQDDFLKEKNPAEIVDSFKHAEEQELLDMRDLRRQNMTKNPLRDMFCLCKAEFRGLMYNCQLCRDWFHEDCVPPPPSASSQNGLLNGGGGGAGMVPPTNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAILAQQQKRRSEGGGIGGGVVGNINSPRKPRRRGSMAKEASGSTESDADDDDDDDECRLRIVEDGFSNDEDELPRPATNTESNTDLLKLLSDSEIENLLDLMMEGDLLEVSLDETLELWRILETMPPTMLQAEANSRVAQYLQRQRQQPTSLPPTSSSIHSGAEDSNDSLLVQNSPNSNSNNSSTTATNTPNNGRNKKRRSNDASGNAAVPRKKQNTPKQTPSKKNAGGGAAANRKSDAKTTPAAAAAATTPGADADAENKQANGGNTNSNISPIAAGVGSGSTTPTPTATPGSAHKKRKRTSTNNNSSNNNNNNNSNSSNTNNTNSNTNNNSTSTPSGTQATTPTATPTGGGGGGGGQKKHAQRNQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCTKTVTVAVSSSSSSNHGMGATTTTMATTGKQRAVQSAR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603133;
- 90% Identity
- iTF_00535838;
- 80% Identity
- -