g5187.t3
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- TFCP2
- Assembly
- GCA_009870125.2
- Location
- CM020869.1:10597042-10605592[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-53 1.1e-49 168.9 0.4 22 189 373 537 355 544 0.91 2 2 2.5e-13 1e-09 38.2 1.3 186 222 572 608 568 609 0.93
Sequence Information
- Coding Sequence
- ATGGCGCTTTCGTTTCTATCGCAAAACTCCGGTCTGTTGGATTTACAAAGCATATTCGACCCGCAATATTCAGAACTGCAACAAGAACatttaaacaacaacaacaacaaccatcaCCACCATCCAATCAACCAACAACACCAGCCAAACGAGGAACTACAACTTCAACTACCACAACGCACGAATTCCACGAAATTCGATTTGAGCATCTTCAACGAATTCGATCAAATGGaattcaacaacaatttgAATCGCAGCCAATATCagaataataacaacaacaacaacagcagcagcattaaTAGCAACGTCAACAACAGTGCAAGCGAGAATTTAAATCAGATCGAGAACCGCCACTTTATTAGCGGCTACCACCATCAGCATATTGGAACGGATTATGAGCAAGTGATCAACTTCGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGACGCCCAGTCGAAGGATTCGCCGGGACCGCAGATAATCGACGTTCAGACCATCTACCTAAACAGCGGCTCCCGCAAAAGACGAATGGATTGGGACTCACTGGACATTGGCCAGACCGAGAATTCCCCCACAGCATCCCAGAGCGGCGAGCTGGCCCCCAAAGTGGCCCCCCAGGAAAAGGACAAGCACAAGCGCGAGAAGCACTCTGGCCGCAGCAGCTGGAGCGATGACATTGGCTTTGATCTGAACGCCGAGTTCAACAGCAACTCGTATTTGAACAATGAAAACTTTCTGTCGTTCTCCCCCACGCTGACCACCCTGAAGCAGGAGCCCCAGACGGAGCAGATCAAGCCGAATCCGAAGCTCTCGCTGGACAGCAGCAATGCCGGAGGCAGTGTCTCTGCCACCGTGGCGATTGCCAAGGTGGACGAGGCGCAGAACTCCCCCCAGCTGGCGGTGGCCTGTGGCCAGGAGACGTCCCCTGGCAATGGCAAGCACGACCTGAGCTCCGGGCtcctctgtggctgtggctcgcCCCAGGGTTCGCCAGTGGCTGCCAGCGAGTATGAGCTGGGCGGACACTCTGACAAGGGCAAGATCAATCCCCAGCAGCAGTTAAGCGTGCTCGATCCATCCAAAATAGAGATTGTGTCCGCCAACGGAGCGCCACACGCCGAGGATCACAAGTTTCAGTACATTTTGGCTGCCGCCACCTCGATTGCCACCAAGAACAATGAGGAGACCCTGACGTATCTGAACCAGGGCCAGAGCTACGAGATCAAGTTGAAGAAGATCGGGGACCTGTCCCTCTACAGGGATAAGATTCTGAAGAGCGTGATCAAGATCTGCTTCCACGAGCGCCGCCTCCAGTTCATGGAGCGCGAGCAGATGCAGCAATGGCAGCAATCCCGCCCCGGCGAACGCATCATTGAGGTGGATGTGCCGCTCTCGTACGGCCTGTGCCACGTCTCGCAGCCCCTGAGCTCCCATTCGCTCAACACCGTCGAGATCTTCTGGGATCCCCTCAAGGAGGTCGGCGTCTACGTCAAGGTGAACTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGGGAGAAAGGTGTACCATTTCGACTCCAGATCGAAACCTATatagaaaacaacaacaacacgaaTCCGAGCTCGAACAACAATAGCGGCTCGACTGCCCCAGCCTCCCCAGAGCGCACCCCCAatgggagcagcaacagcaactgcagcggAGGGCTATCCATCGCCAGCGTCAAGCAGGCCGTCCATGCAGCTGCCTGCCAGATCAAGGTCTTCAAGCTGAAGGGCGCCGATCGCAAACACAAGCAGGACCGCGAGAAGATCCAGAAGCGTCCACAGTCGGAGCAGGACAAGTTCCAGCCCAGCTACGAGTGCACCATCATGAACGACATATCGCTGGATCTGGTGATGCCCGCTACCACCACGGGCTGCTACAGCCCCGAGTATATGAAACTTTGGCCCAATTCGCCCGTGCACATACCCAAGTACGATGGGATGCTTCCGTTCGCGTCCAGTGCAGCATCGCCggcgaccagcagcagcagccccattGCCATCAACTCGGTGACGTCAACCAACTCGCCCAACCTCAAGCTGATGGACGCCACGAACATGGTCTCGCCGCAGCATGTGCCCGCGGACATGGATGACTTTAATCAGAACATTATGCCAGAATCGACGCCCGCCCAAGTGACGCAGTGGCTGACCAACAATCGCCTCACGGCCTATCTATCGACGTTCGCCCACTTCTCAGGAGCTGATATAATGCGCATGTCCAAGGAGGATCTGATACAAATCTGTGGCCTGGCCGACGGCATACGCATGTTCAACATATTGCGAGCCAAGACCATCACACCCAGACTCACGCTGTATGCCAGCCTTGACGGTTGCAGCTACAATGCCATCTACTTGCTGTCGAACACGGccaaggagctgcagcagaagctgTTCAAGATGCCCGGCTTCTACGAATTCATGGCGAAGGCGGGTGCCCAGGAGaatggaggagctgctgccgccgcggccgccgctgctgctgctgcaatgtACAACAGCTGGAGCATGCACTCGAAGTATTCAGGCAGCGGCTCGAACATCTACAACGACGCCAACAAGAGCTGCGTGTACATCTCGGGACCGTCTGGGATCCTGGTCAGCGTCAGCGACGAGGTGCTGAACAACGAGATCAAGGACGGCAGCCTCTATGCCCTGGATGTGCAGAGCGGCAAGGTCATCTTGAAGCTGATCAACAAGCAGGACAACAATTGA
- Protein Sequence
- MALSFLSQNSGLLDLQSIFDPQYSELQQEHLNNNNNNHHHHPINQQHQPNEELQLQLPQRTNSTKFDLSIFNEFDQMEFNNNLNRSQYQNNNNNNNSSSINSNVNNSASENLNQIENRHFISGYHHQHIGTDYEQVINFVDSPPNSEESWTDAQSKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQTENSPTASQSGELAPKVAPQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLTTLKQEPQTEQIKPNPKLSLDSSNAGGSVSATVAIAKVDEAQNSPQLAVACGQETSPGNGKHDLSSGLLCGCGSPQGSPVAASEYELGGHSDKGKINPQQQLSVLDPSKIEIVSANGAPHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSHSLNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENNNNTNPSSNNNSGSTAPASPERTPNGSSNSNCSGGLSIASVKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVMPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSAASPATSSSSPIAINSVTSTNSPNLKLMDATNMVSPQHVPADMDDFNQNIMPESTPAQVTQWLTNNRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTITPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKAGAQENGGAAAAAAAAAAAAMYNSWSMHSKYSGSGSNIYNDANKSCVYISGPSGILVSVSDEVLNNEIKDGSLYALDVQSGKVILKLINKQDNN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00489142;
- 90% Identity
- iTF_00574575;
- 80% Identity
- -