g6727.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- XBP1_1
- Assembly
- GCA_009870125.2
- Location
- CM020869.1:21366433-21367437[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-15 2.2e-12 46.9 11.4 2 58 81 137 81 139 0.94 2 2 7.5e-05 0.076 13.2 6.1 30 62 130 162 128 165 0.87
Sequence Information
- Coding Sequence
- ATGGCACCGACCGCGAATGCCTATTTGATAACGGTGGACACGCCCGTGGCTATATCCACGAATACGTTGCCCAAGCTCCGGCCCGCACCCCTGACAGCGGCTCTGCTCAAGGGGGCGGCCTCGCCCACACGCTCGAGCTCGGGATACGCCTCGTCCTCCTACGATAACATGGAGGAGGAAGAATCTTTGGTGGCCTCACCACCCAAGGCCAAGAAGCGTCGCCTGGATCACCTCACTTGGGAGGAAAAAGTACAGAGAAAGAAGCTAAAGAATCGCGTTGCAGCCCAAACATCACGCGACCGCAAGAAGGCTCGCATGGAGGAAATGGAGTACGAGATCAAGGAGCTAACTGACAAAACAGAATTACTACAAAACAAATGCGAAAGTCTACAGTCCATCAATGAGTCGTTGctggccaaaaaccaaaaactggACACAGAAGTAGAACTATTGCGTCAGGAACTTGATGAgatgaaacaacaacagaagcagcagcacgcCAAAAACATCACCTGCAACAGCTCCAATGCCAACACAGGCGCTGAGGGCTGTGCGTCCACAATCCTTGGATCCGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACTAGTGGACACACAGTCGTCAGCGCGTCTGTTGGCGGAACAGCTGAAAAGCAGCAAGACCATAGCCTCGCTCTGGAAGGTTGTGGCTCTCTGCCTACTCTACAAGACATGCTGCTCGTCGACGATGAAGAGTTCGACGCGCGGCGACTTGAAGAACTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAAGCTGGCTCTGGAGCGTGCGGCCCAACTGCTGCCAAAGATTCAGGCGAAAAAGAGCGACTGCTTGGATCAATGGTGGGGACCCCAACAGAGCGCCTGGAATCCGGCGGGCATAGAGCTGATGGCCTAG
- Protein Sequence
- MAPTANAYLITVDTPVAISTNTLPKLRPAPLTAALLKGAASPTRSSSGYASSSYDNMEEEESLVASPPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTELLQNKCESLQSINESLLAKNQKLDTEVELLRQELDEMKQQQKQQHAKNITCNSSNANTGAEGCASTILGSAASNADPLPQGTLVDTQSSARLLAEQLKSSKTIASLWKVVALCLLYKTCCSSTMKSSTRGDLKNWPKVCSQISQQTWKLALERAAQLLPKIQAKKSDCLDQWWGPQQSAWNPAGIELMA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00480628;
- 90% Identity
- iTF_00535804;
- 80% Identity
- -