Basic Information

Gene Symbol
-
Assembly
GCA_018153035.1
Location
JAECXR010000001.1:447660-453624[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00022 0.23 11.4 0.9 3 45 42 99 40 100 0.75
2 4 0.0063 6.5 6.8 0.0 1 32 172 214 172 219 0.81
3 4 0.7 7.3e+02 0.2 0.0 4 20 298 314 298 317 0.85
4 4 0.076 79 3.3 0.0 27 46 338 357 332 357 0.79

Sequence Information

Coding Sequence
ATGAGCGAAGCATGCGCCTTTAATGAGAACGAGGAAGACGAACAGAAATACGCGCACCTGCTGAACTCAGATTATTTTGGCGGCGCCAGCCAGTCCGTATTGGAAAGCAGCACCGATAAACGCCAATGGAAGAATGAGGAGGTGGAACTCTTTCTGGGCGTCATCTATGAACTCAAGTTGCAAAGTCAATTGCATGGAAAACGTAACTCGAAGGTCTTCAAGGTGATTGCCAAGGAGATGGGCAAAAAAGGCTATTCCAAGAGCGCCCAGCAGCTCCAATCAAAATACCATCAGTTGAGAAAACAATTTGTGAGGGCCAGGAACGGTGGTGAGCCCTTTGAGCACTTTGAGGCCCTGCACGAATTGTTCCAGGCCAGTGGAGCTTCAGACCTGGAGCCAGAGCTGGACAGTGACAGCGAGGCAGAGATGGACGAGGATATGGCCGGCCTAGGCTCTGAAACTGAAGGAGAGGATACTTTAGATGCCTCTTCCTCTACAATGCACGTCAATGCCCGCTGCAAGTGGACCGAGGGCGAGGTGGACATGCTGCTCGACCTGATCACCACAATGGGCCTGCGAAGAGCCCTATTGAGCAAGCGAAACGCGAAAGTGTTCAGGGCGCTGGCCAAAGAAATGGCCAAGCGAAATTGCAACAAGGGCCCCGACAAGCTGCGCATCAAGTTCCAGCTTTTGCGGCGAATGTACAACAAGGTGAAGAATGGAACCGGCGAGACCTTTGAGCACTTCGAGGCTATGCGTCAAGTGCTGGATCCCACGCCTGAGGAAGCTGCCGTTGGCGACGCGGATGCCAATTTAAGTTCTGCCAGCGAAACCGAATTTAATGATAGTGAGGACGATGATGGTGATCCCGCGCAAAGAGGAGCTCACTTTTGGTCAGACGAGGAGGTGGATGCCTTTCTTTTGGTTATCAGGGACAATGGCTTCTTTCGGGCCTTGGATGGCTCGAGGAAACGAAACTTTCAGACTCTGGTGCACATCTCCAATATCCTGGCCAAGCAATCCTTCAAACGGACACCCCACCAGCTGCGAAATAAACTGAGAATGCTGCTCAAGCGGCATCGCGAGGCCAAGGAGCATGGCTTGGAGAATGTGCGCATCCTGCCCCGCCACTTCGAACTGTTCGATGAACTCATCAAGACGCCGCATGAAACCCCAAAGAGTGCCACCCAAAGACCCAACCGTCCAATAAAAACGTTCTGTTCGAAGCCATCCAGGTCTAAGGCACCGCCCGAGACGGACAGTGATAGTTCCAGCTCCACCTGTGATCTTCTGAGGGCGGCCGGCGAAAGCGAAGATTTCGAAGATGGTTTAGACGCCATTGAAGGCGAGCAGCCCACGCCAATGGAGGCCATTACTGGCATTATGGAGGGCCAAAAGCAACTTTTGAGCCTTATCAAGTCCACCAACGAGAGCTTCCTGCGGCAACAGCGCGCACAGCAACAGGAATTTCTGGAGCAAGTGTCCGAGCTGATGCGCCGCGACCGCGAGGAGACTCTTCGCCGGATACAGGAACTAATGCCCCCCAAGTAA
Protein Sequence
MSEACAFNENEEDEQKYAHLLNSDYFGGASQSVLESSTDKRQWKNEEVELFLGVIYELKLQSQLHGKRNSKVFKVIAKEMGKKGYSKSAQQLQSKYHQLRKQFVRARNGGEPFEHFEALHELFQASGASDLEPELDSDSEAEMDEDMAGLGSETEGEDTLDASSSTMHVNARCKWTEGEVDMLLDLITTMGLRRALLSKRNAKVFRALAKEMAKRNCNKGPDKLRIKFQLLRRMYNKVKNGTGETFEHFEAMRQVLDPTPEEAAVGDADANLSSASETEFNDSEDDDGDPAQRGAHFWSDEEVDAFLLVIRDNGFFRALDGSRKRNFQTLVHISNILAKQSFKRTPHQLRNKLRMLLKRHREAKEHGLENVRILPRHFELFDELIKTPHETPKSATQRPNRPIKTFCSKPSRSKAPPETDSDSSSSTCDLLRAAGESEDFEDGLDAIEGEQPTPMEAITGIMEGQKQLLSLIKSTNESFLRQQRAQQQEFLEQVSELMRRDREETLRRIQELMPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00477279;
90% Identity
iTF_00566018;
80% Identity
-