Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: ct
Assembly: GCA_018153035.1
Location: JAECXR010000014.1:2788223-2813152[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.2e-27 5e-23 80.7 0.0 3 72 981 1051 979 1056 0.95

2 3 3.2e-32 4.9e-28 96.7 0.0 3 77 1426 1501 1424 1503 0.96

3 3 2e-31 3.2e-27 94.2 0.0 3 76 1716 1790 1714 1793 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.2e-27	5e-23	80.7	3	72	981	1051	979	1056	0.95
2	3	3.2e-32	4.9e-28	96.7	3	77	1426	1501	1424	1503	0.96
3	3	2e-31	3.2e-27	94.2	3	76	1716	1790	1714	1793	0.96

Sequence Information

Coding Sequence: ATGAAGGAAAATAAAGCCCAGAGAGGAGGAGACCTCTCCTCCCGGCCAGGAGAAGAGGACATGCCCAGTCCCAGTCCCAGTTCCAGTCCCTCAGTAGTGGCTACACGCGCTACCCTGGCCGAGAAGGAAGTCAATACCCTGAAGGAGCAGCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGGCGAACGCGGCGGCGAGCGCCAATACGCCGTCGCCCTCGCCGCCGTTGCTCACCGCCGAGCAGCAGCAGCAGTTGCAGAGCAGCTTGCAGCAGGGCGGCGGCTGTCTCAATCCGAAGCTCTTCTTCAGCCACGCCCAACAGATGATGATGGAGGCGGCAGCGGCGGCGGCGGCAGCGGCAGCTGCCCTCCAGCAACAACAGCAGGAGGAGTCCGATCAGGTGACCACCGATCAGGTGGCGGGTTCAGGTGCCTCTGAGGTGGCGCCAGCCAGCAGTAACCTTAATCACAGCAGTAGCAATACCGCCCACGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATGCCTCGATGCAGTCGAATGCCGATGATATGGAGTTGGATGGCCCGCAAGAGGCCGGTACGGGAGTTGGGGCCGAGGCGGTTGCCTCCAGAACTGAGCCAAGGACTGAGCAGGTGGAGGAGCTGCTACTACCGGGGGCTACTACCGACAAGGAGGCGACGGAGGCGACTACCTTAACCGTTACCGTTAGCAATAATAATCACACCAGCGAGAGCAACAACAACAACAACAACAATAGCTGTGGTAGGAGGAGCGAAGATGTTGAGGAGGAGCACCGTATGGCGGCCAGTGTTGAGGATGAGGATGATTGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCCGCCGTCCTATTGGCCGCCAAAGATAAAGAGATTAAGGCCCTGCTGGATGAACTGCAGCGCCTGAGGGCTCTCGAACAGACCCACCTCGTGCAGATCCAACGCCTCGAAGGACATTTGGAGGTGAAGCGCCAGCACATCATCCGACTGGAGGCCCGTCTCGACAAGCAACAGATCAACGAGGCCCTCGCCGAGGCCACCGCTTTGGCAGCTGCCACCAACAACAACAACAATAACATTAGCCAGAGCAGCGACAACAACAACAAGCTGCCCATCGAAGCCCAAGAGTCCGAGTCCTCCGCCGTCGTCGAGGACGAGGAGGAAGAGGAACCGGACCAGGCCATGCTGGTGGATGGCGAGGAGCAGGAGGAGAACGATGACCACGACCACGACGACAAGGAGGCGAAGGAGGAGGAGGAGGAGGAGCTGGAGGATTCCGAGCAGCGGATCGAACGTTCCTCCGCCCTCCCATCATCCACCAACGAAGGCAACGAGCTCAAAATCAAAAAGGAACAGCACAGTCCGCTGGATCTGAATGTGCTCAGTCCACAGTCGACGATCGCTGCTGCAGCCGCGGCCGCAGCTGCCGCTGCCTGCGCCAACGATCCCAACAAGTTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAGGCGCTAAAGAACGGCAGCGGTGACGCCGCCAATGAAGAGACGAGTCCGCCGATCGGCGCTGGTCCGGCCCCGCCGGCTACCCCGCCGGATATCCTGGCTGCCAAGCAGGAGGTCGTGGCCGTCGATGAGCAGGATCACGAGCCGCCCACCACCACACTAGTCAGTGGTGGCTACTGGCGACGCGGCTTTGATCCGGACACGGTCAAGTCCGGGAGTAGGCTGTTGCCACCGCCACCACCCCCACTGCCGCACTATGGCCCTCCGGCTGCCACGCCTCTTTATCCCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACCGTCGTCCACCGCCTTGCTGAGCCAACTGGTTAATTCGACATTTTCCAACTCCACCCCCTCTTCTTCCTCCACCCGCCTAGATGGAAGCCACTCGCAGCCGCATCCACAGCCCCCGCACCACCATGCGCAGCACCCGCAGCACCCACAGCACCCGCATCCGGCCGCCAGCCAGCCGAATCCTGCGGAGAACCATCACCACCACCTGCATCTGCTCCATCCCTCGGCCGCCGCGGCGCACCACCTGCAGCAGCAGCAGCACCACCACCACCACCAGCAGGACGGAAGCTCCAGCTCGAGCGCCACCAGCACCCCGGCCAGCAACGGTGCCAAGGCGGCCCAGCTGCTCCAGGATCCGGAGTCGGCCGCCGCCACCGCCACCGCCAACGGTCTGGCCGCCGCCGCCATGGCCGCTCATGCCCATGCCGGCTTCCTGCCGGGCCTCTCGCCGGCCTTCCAGTTCGCGGCCGCCGCCGCTGCCGGGCAGGATGCCCGCGGACACTACCGGTTCGCCGACGCGGAGCTGCAACTGCCACCGGGCGCCTCGATGGCCGGCCGGCTGGGCGAGTCCCTCATCCCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGGCCCTGGACACCCTACACATCTCGCGCCGCGTCCGCGAGCTCCTCTCCGTGCACAACATTGGCCAGCGACTATTCGCCAAGTACATCCTGGGCCTATCGCAGGGCACCGTCTCGGAGCTCCTCAGCAAGCCCAAGCCCTGGGACAAGCTAACCGAGAAGGGACGTGACAGCTACCGGAAAATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTCCTCAAGTCGCTGATACCCAAGAAAGACTCTGGCCTTCCCCAGTACGCCGGCCGTGGCCCCGGCGGCGGAGGCGACGACTCCATGTCCGACGACCGCATCGCCCACATCCTGAGCGAGGCCTCCTCGCTGATGAAGCAATCCAGTGCCGCCCAGCAGCAGCGCGATCACGGACGCGAGGACTCCCACAGCAACGAGGACAGCAAGTCGCCGCTCCAGAGCTGCACCTCGCCCTTCTTCAAGGTGGAGCAGCAGCTGAAGCAGCAGCACCTCACACCGGAGCAGGCCCAGCAGCAGCGGGAGCGTGAGCGCGAAAGGGAGCGCGAACGGGAACAGCAGCAGCGCCTGCGGCACGAGGATCTCGCCCAGGACAAGATGGCCCGGCTCTACCAGGAGCTCATTGCCCGCACTCCCCGTGAGACGGGTTTCCCCAGCTTCCTGCTGTCGCCCTTCTTCGGAGGAGCAGCTGGCATGCCTGGAGCAGCCGCCAACGCCTTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGGCACGCATTCGAGCGGGAGATCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAACTTCTCCAGCCTGATGGCCCTGCAGCAGCAGGTACTCAACGGCGCCCAGGACCTCTCCCTGGCCGCCAAGGACATCAAGCTGAACGGCCAGCGATCCTCGCTGGAGCACAGTGCCGGCAGCAGCAGCTGCTCCAAGGACGGCGAGCGCGAAGACAACTACGCCGCGTCCCTGCACGGCCTCAAGTCGGAGGGAGGCGGAACTCCAGCTCCGCCATCGGTAGGACAGCCGCCGTTGGCGTCCTCTGGTGGACCAGGAGCCGGTGGAGCCTCCGGCGGTGCCGGTAGCAACTCGGCTGCCCCCAGTCCGCTGAGCAACTCCATCCTGCCACCGGCGCTGAGCAGCCAGGGCGAGGAGTTCGCCGCCACAGCAAGCCCGCTCCAGAGGATGGCCTCGATCACAAACTCTCTGATCACCCAGCCCCCGGTGACGCCCCACCACAGCACGCCCCAGCGGCCGACCAAGGCGGTCCTGCCGCCGATCACCCAGCAGCAGTTCGACATGTTCAACAACCTCAACACGGAGGACATCGTGCGTCGGGTGAAGGAGGCCCTCTCCCAGTACTCGATATCGCAGCGGCTCTTCGGCGAGTCCGTGCTGGGCCTCTCGCAGGGCTCCGTCTCGGACCTGCTGGCCCGGCCCAAGCCCTGGCACATGCTGACCCAGAAGGGGCGCGAACCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAACGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAACTGATGCGCACCGGCAGCTACAGCGGCAGTCCCCAGATGCCGCAGGGCTTCGCCTCCAAGATGCAGGCCGCCGCGCTGCCCATGCAGAAGATGATGAGCGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTACTAACCTCGCCGGGCCTGCCACCCCAGCACGCCATCAGCTTGCCGCCCGGCGGAGGCAATGCCAGCGGCGCCGGTTCCGGCTCCGGAGTGGCTCCGGGAGGAGCCTCCAGTGTGAACAACGCCAGCCCCGCCGGTGGCGGTAGCGCCGAGAAGAAGCCCATGCTGATGCCCGTCCATGGCGCGAATGCCATGCGAAGCCTCCACCAGCACATGTCGCCCACCGTCTACGAAATGGCCGCCCTCACCCAGGACCTGGACACCCACGACATCACCACCAAGATCAAGGAGGCCCTGCTGGCCAACAATATCGGCCAGAAGATATTCGGCGAGGCGGTCCTCGGACTCTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAGCCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGGGAGCCCTTCATCCGGATGCAGCTCTGGCTCAGCGATGCCAACAACGTGGAGCGCCTGCAGCTGATCAAGAACGAGCGGCGCGAAGCCTCCAAGCGGCGGAGGAGCACCGGACCGAACCAGCAGGACAACAGCAGCGACACCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCCGGGCCCGGATCCGTGGGTAGCGGCGTGGGCGGTGCCCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTCCGAGGAGCAGAAGGAGGCCCTGCGCCTGGCCTTTGCACTCGACCCGTACCCCAACGTGGGCACCATCGAGTTCCTGGCGAACGAGCTCGGCCTGGCCACCCGGACGATCACCAACTGGTTCCACAACCACCGCATGCGCTTGAAGCAGCAGGTGCCCCATGGCCAGCCCGGCCAGGACAACCCCATTCCCAGCCGCGAGAGCACCAGTGCCACGCCCTTCGATCCCGTCCAGTTCCGCATCCTGCTGCAGCAGCGCCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGCGCCCCGATCCCCTATCCGCCGTACTTTGCCGCCGCCGCCCTCCTGGGCCGCAGCCTGGGCATTCCCGGAGCCGCGGCAGCTGCCGGAGCAGCGGCTGCAGCAGCGGCAGTGGGTGCCGCCGGCTCGGGCGGAGCCGACGAGCTGCAGGCTCTGAACCAGGCCTTCAAGGAGCAGATGAGTGGTCTGGATCTATCCATGCCAAGCCTGAAGCGTGAGCGCAGCGGCGACTACCAGGACGACATGGAGCACAACCTGAGCGACAACGAGAGCCTGGAGGGCTCCGGCGGCCAGGACGGTGACCTGGACAAGACCGGGGGCAGCACCGATTACGAGAAGGTCCTCCACAAGTCCGCCCTCGCCTCGGCAGCGGCGGCCGCCGCCTACATGTCGAATGCGGTAAGGAGCTCCCGCCGCAAGCCTGCAGCGCCCCAGTGGGTGAATCCCGCCGGCGCCGGAGGACCTGCCGCCAATCCCGTAGTGGCTGCCGCCGTAGCAGCAGCCGCCGCAGCAGCAGCCGCCGCCGAGGGCGAGCGGATCATCAACGGTGTCTGCGTGATGCAGCCCTCGGAGTACGGAGTGCGTGGTGAGGAGAGCGATGGCAAGGGTGGCGAGGACTCCTCCATGGGGGGCGGCGACGCCGAACTGGAGATCGATCAGAGCTTCATGGAGCCGGAGGTGAGCATCAAGCAGGAGGAGGACGACGAGGAGGAGGAGGAGCCCGCCCAGGCTCACCCCCTACTGGAGGGCTCCGCCGAGGACGCCGCCGAGCAGAAGCTCAAGGTGGTCAACGAGGAGAAGCTGCGCATGGTGCGCGTCCGCCGTCTCAGCAGCAACACCGAGGAGTCCGCCGTGGGAGACAACGCCAGTGGCGCCTCAAATCCCGCCGCCTGCTCCCCGCCAGCCGGTAACGGTAGTGGAGGAGCTGGAGTCGGATCCGGCGCTGGCTGGACCTATTAG
Protein Sequence: MKENKAQRGGDLSSRPGEEDMPSPSPSSSPSVVATRATLAEKEVNTLKEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLANAAASANTPSPSPPLLTAEQQQQLQSSLQQGGGCLNPKLFFSHAQQMMMEAAAAAAAAAAALQQQQQEESDQVTTDQVAGSGASEVAPASSNLNHSSSNTAHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNASMQSNADDMELDGPQEAGTGVGAEAVASRTEPRTEQVEELLLPGATTDKEATEATTLTVTVSNNNHTSESNNNNNNNSCGRRSEDVEEEHRMAASVEDEDDCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEGHLEVKRQHIIRLEARLDKQQINEALAEATALAAATNNNNNNISQSSDNNNKLPIEAQESESSAVVEDEEEEEPDQAMLVDGEEQEENDDHDHDDKEAKEEEEEELEDSEQRIERSSALPSSTNEGNELKIKKEQHSPLDLNVLSPQSTIAAAAAAAAAAACANDPNKFQALLMERTKALAAEALKNGSGDAANEETSPPIGAGPAPPATPPDILAAKQEVVAVDEQDHEPPTTTLVSGGYWRRGFDPDTVKSGSRLLPPPPPPLPHYGPPAATPLYPPPXXXXXXXXXXXXXXXXXXXXXGPSSTALLSQLVNSTFSNSTPSSSSTRLDGSHSQPHPQPPHHHAQHPQHPQHPHPAASQPNPAENHHHHLHLLHPSAAAAHHLQQQQHHHHHQQDGSSSSSATSTPASNGAKAAQLLQDPESAAATATANGLAAAAMAAHAHAGFLPGLSPAFQFAAAAAAGQDARGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGPGGGGDDSMSDDRIAHILSEASSLMKQSSAAQQQRDHGREDSHSNEDSKSPLQSCTSPFFKVEQQLKQQHLTPEQAQQQREREREREREREQQQRLRHEDLAQDKMARLYQELIARTPRETGFPSFLLSPFFGGAAGMPGAAANAFPAAMAADENMRHAFEREIAXXXXXXXXXXXXXXXXXPNFSSLMALQQQVLNGAQDLSLAAKDIKLNGQRSSLEHSAGSSSCSKDGEREDNYAASLHGLKSEGGGTPAPPSVGQPPLASSGGPGAGGASGGAGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGFASKMQAAALPMQKMMSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTSPGLPPQHAISLPPGGGNASGAGSGSGVAPGGASSVNNASPAGGGSAEKKPMLMPVHGANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLGIPGAAAAAGAAAAAAAVGAAGSGGADELQALNQAFKEQMSGLDLSMPSLKRERSGDYQDDMEHNLSDNESLEGSGGQDGDLDKTGGSTDYEKVLHKSALASAAAAAAYMSNAVRSSRRKPAAPQWVNPAGAGGPAANPVVAAAVAAAAAAAAAAEGERIINGVCVMQPSEYGVRGEESDGKGGEDSSMGGGDAELEIDQSFMEPEVSIKQEEDDEEEEEPAQAHPLLEGSAEDAAEQKLKVVNEEKLRMVRVRRLSSNTEESAVGDNASGASNPAACSPPAGNGSGGAGVGSGAGWTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00481449;
90% Identity: iTF_00579884;
80% Identity: iTF_00579884;