Basic Information

Insect: Drosophila pruinosa
Gene Symbol: -
Assembly: GCA_018150935.1
Location: JAECWR010000199.1:38943940-38956056[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.11 9.3 7.0 0.8 1 23 692 714 692 714 0.95

2 7 1.4e-05 0.0012 19.3 1.1 1 23 720 742 720 742 0.98

3 7 2.4e-06 0.0002 21.7 0.2 1 23 748 770 748 770 0.98

4 7 1.3e-06 0.00011 22.5 1.2 1 23 776 798 776 798 0.98

5 7 0.0004 0.033 14.7 1.8 1 23 804 826 804 826 0.97

6 7 4.3e-06 0.00035 20.9 2.4 3 23 834 854 832 854 0.94

7 7 4.1e-05 0.0033 17.8 0.6 1 23 860 883 860 883 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.11	9.3	7.0	0.8	1	23	692	714	692	714	0.95
2	7	1.4e-05	0.0012	19.3	1.1	1	23	720	742	720	742	0.98
3	7	2.4e-06	0.0002	21.7	0.2	1	23	748	770	748	770	0.98
4	7	1.3e-06	0.00011	22.5	1.2	1	23	776	798	776	798	0.98
5	7	0.0004	0.033	14.7	1.8	1	23	804	826	804	826	0.97
6	7	4.3e-06	0.00035	20.9	2.4	3	23	834	854	832	854	0.94
7	7	4.1e-05	0.0033	17.8	0.6	1	23	860	883	860	883	0.98

Sequence Information

Coding Sequence: ATGGCGGTTGAAATAACCAACTCAATATTATCGCTACAACCCGCAGTTGAGCTGGATCCAATGGCACCCCAGTCATTCCATTGGCAGCTTGAGGATTACGCATATTTTCACAAGTGTGGCGAAATCACAACATCACCGGACGTGCAATGCTTTGGCTTCAATTGCGCCTTTTGTCCAGCCATTTGTCTGCAGTTTTCGGTCTTCATAGATCACATACGCGGCCATCACATGCAGGATATGCGCCGGCGCTACGAGGTTGCTGATGAGAAAATCGAACAAACAACACAAACTGATTTTAATTTAGCGCTAATGGACATCCACATGGACAGCGAGATTCTACATGCCCCAGTAGCGGAAGTACCAGCACCAGCACCAGCAGCGGTGACTCCTGCAGTGGCCACAACAAATGCACGCCTTGATAAACGTATGAAAAAATCCAATTGGAGTGATACAATGGGCACATTGGGGTTGGCAGACACACAGAGCGCTGCCACTGTGGGACTGTTGGACGTGAGCATTGGCATGGATATGGGCATAGACTTGGCTGACATTGTGCAGCAGAGTCCACGATTGCTGCACTCGATAGATCCATTTGAAATGTTGCATGAGGCAACCGTAACAGCACACACGCAACCACACACAGTAGTCGCACAGGCACAGTCAACGCTGGAGGCATGCTCCAGAGGTGCTCTTAGTGTCTCCGCATCGCCCCGCTATGAAACGCGACGCGTGGCATTGCAACGCAAACTGCGCGATGCGGAAACCGTGAAGACTGCAGAAGACAAACAACAGAAACCACAACAACAACATGTTCAACTGCAACAACTACAACAACTGCAGCTTGAATTACAACAGCGCCAGGAACATCTGGAGAAGAATGTGCTGGAACTTACTCCCCCAGCAACGCCACCGACTCCAATACCGCCCACCTCGCCCACCAGCAGTGTCGCCAGTAGCGTTGACTTGAAGTTGCGCACGCGTCGCGAACTGGAGCGGAATCGGGAATTCGTCTGCTCGCTGTTGGTAGCCTACGAGCGGAACGAGAAGCTGTGGAATCCCAAGCATGCTGATTACAAATACAATGCGAAACGCAGCGTTTACGGCGAATTGGCTGCTCCCCTGCAGGCCACCTTTCAGATGCCCCTAACAGGTGTCGAGATCTTCGCAGTGCTCAAGGAACTGCGTGGACGGTATCGTCGCGAGCTGAGCAAACTCAACTCTTTGGGTGGCAAGTACAAGTCGCGACTGTGGTACTTTGAGAAGATGCACTTTTTACGCAGCGTCATCGAGCACAAGCGAGCCGAAAGAGAGGCAAAGAGCGAGTCTACGGAGAGCGAAAAGTCAAGTGAGACCGACAACGAATCGACCACAAAGTCAGCACAGTTCCGCGAGGTGCTCAGCTGCATAATCGAAGCATTCCGACGGCAGGAGAGTCTGTGGAATCCGCAACATTTTGACTACAACAACTGCTGCAAGAAGGAGCTGTATCGCGAGATCTCGGCAGAGCTACTCGAGGAGCTGAACTACGAGATGAGCGGCGAGGAGTGTTACAAGGAGATACAAAAGTTGCGCACACGATATCGCAAAGAGCTGCGCATGGTAATCAAACACAAGGGACTCTATCTGCCCAAGCTATGGTGCTACGATGAACTGGAGTTTCTACACAAAATACTGCAGGATCAGATCTTCAACAAGCTAAGCAAGAAAAAGGGCGTTGTGGAAACAAATCAAAAGACGAAGTTCATCAATGCTAGCTGCATCATTTTTAGCACGCAGGAGGATCAGCTTCAATTTGTGGAAATCTATCGCAATTATCCAGCGTTGTGGGATGTAGATCATCCAGATTTTCGCTCCAATGCATATCGCAATCAAGCTTTAAGCCAAATGTTGGAAGAGCTAAACACAACGTTCCAGTGCACGTATACCTCTGCCCAGCTGGAGAAGACGCTGTTTGAGTTGCGCAAGGACTTCTCGGCACAGAAACGCAAAATGCTGACTTATGCCGCAGGCTCAACCAGTATATCACTGCTTCATGCCAAGCTGGGTGAATATCTCGAACAGAATATGGGCCCTTTTCGCTGTGGTGTTTGTGATGAGCTGATCAAGACCTGTGATCAGTACAAGGTGCATCGTGCCGGACACGATGGCACCCAGCCATTCATCTGTACACTCTGCGGCAAGGGCTTTCAAATGCCGTGCAACTTGACGGTGCACATTCGTCGTCATCGTCGTGACTTTCCCTATGCCTGCGAGCAGTGCGACAAGCGATTTGCCACATCCACCGAGGTGGCCATACATATGCGCACGCACACCGGCGAACGTCCCTACATATGCGATCTGTGTGGCAAGTCTTTCAAGACATGGTCATTCTTCGACATCCATCGGCGCACTCACCTCAATCAGTCAACGTTCCATTGCCCCATCTGCGACAAAGGGTTCTACGAGAAGAATCGCTTCACCGATCACATGAATGCCCATTTAAACATTCGCAAGCATTTATGCACCGTCTGCGGCAAAACTTTTACCACATATGGCAATCTCAAGAAGCACACAGAACTGCATCTGGCCGTGAAGAAGTACAAGTGTGCGGCTTGCGGCAAGCGCTTTGCCCAGTTCGCCAGTCTGCGCTGGCACAGAAAGCGTGAACACAACTCTGAGCATAAGGAGGAAGAGGAGGAGCAGGTTGTAGGAGACGAGGAGACATAA
Protein Sequence: MAVEITNSILSLQPAVELDPMAPQSFHWQLEDYAYFHKCGEITTSPDVQCFGFNCAFCPAICLQFSVFIDHIRGHHMQDMRRRYEVADEKIEQTTQTDFNLALMDIHMDSEILHAPVAEVPAPAPAAVTPAVATTNARLDKRMKKSNWSDTMGTLGLADTQSAATVGLLDVSIGMDMGIDLADIVQQSPRLLHSIDPFEMLHEATVTAHTQPHTVVAQAQSTLEACSRGALSVSASPRYETRRVALQRKLRDAETVKTAEDKQQKPQQQHVQLQQLQQLQLELQQRQEHLEKNVLELTPPATPPTPIPPTSPTSSVASSVDLKLRTRRELERNREFVCSLLVAYERNEKLWNPKHADYKYNAKRSVYGELAAPLQATFQMPLTGVEIFAVLKELRGRYRRELSKLNSLGGKYKSRLWYFEKMHFLRSVIEHKRAEREAKSESTESEKSSETDNESTTKSAQFREVLSCIIEAFRRQESLWNPQHFDYNNCCKKELYREISAELLEELNYEMSGEECYKEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDELEFLHKILQDQIFNKLSKKKGVVETNQKTKFINASCIIFSTQEDQLQFVEIYRNYPALWDVDHPDFRSNAYRNQALSQMLEELNTTFQCTYTSAQLEKTLFELRKDFSAQKRKMLTYAAGSTSISLLHAKLGEYLEQNMGPFRCGVCDELIKTCDQYKVHRAGHDGTQPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACEQCDKRFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRTHLNQSTFHCPICDKGFYEKNRFTDHMNAHLNIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCAACGKRFAQFASLRWHRKREHNSEHKEEEEEQVVGDEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00608653;
90% Identity: -
80% Identity: -