Dpru005719.1
Basic Information
- Insect
- Drosophila pruinosa
- Gene Symbol
- ZNF574
- Assembly
- GCA_018150935.1
- Location
- JAECWR010000199.1:23158812-23161005[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.012 0.95 10.1 0.5 2 23 326 348 325 348 0.96 2 10 0.94 77 4.1 0.4 6 23 358 375 358 375 0.98 3 10 0.00024 0.019 15.4 2.1 1 23 381 403 381 403 0.98 4 10 0.0001 0.0084 16.6 0.7 1 23 416 439 416 439 0.90 5 10 4.6e-05 0.0037 17.7 0.7 1 23 447 470 447 470 0.97 6 10 3.7e-05 0.003 18.0 1.2 3 23 478 499 476 499 0.92 7 10 0.0024 0.19 12.3 0.4 2 23 511 533 510 533 0.97 8 10 0.00071 0.058 13.9 7.0 1 23 540 563 540 563 0.93 9 10 2.1e-06 0.00017 21.9 1.2 1 23 569 591 569 591 0.98 10 10 4.9e-05 0.004 17.6 1.4 1 23 597 620 597 620 0.97
Sequence Information
- Coding Sequence
- ATGGCCGTCTGTGTGCTATGCTTTGAACGCTGTAAGATCGGTCTTTCCCATAAGATATTTTCCGAAGCAGGCTTGCAGTTAAATATTTGCAAAACCATAAACAAACACTTTTGGCTGGAATTAAGCAGCGCGTCTGGAAATAATGAGGAAATTTGCACTCAATGCTGGGAATCTGTGAACAGCTTTAATGTATTTTACCAACGCGTGTACCATGCGCACCAGGAACGACGCGAAGTTAAGAATGTGCCCATTGTGTACTGCGGTGAAACGGAGACAGCTAATCCACTTGCCTTTGCAGCAGAATTGGATGCATTGGCGGAGGATTTCATTCCAACGGATAACGTGAAGGTAGAGGTGAACGAGTTGGAACCATTACCCAAGCTGGAAATGCTTGAAGAGCCAGTGCTTGAGGGAACGAAAGCCACCAAACGCCCTTCTGCTGATACTTCAGCGATTTCAAAACGACGCATTAAACACGAACAGCAAACAATCGGTAGTGACTCCGACGGGGATAGGCCACTAGCTGAGTTTCTAGAAATCAAACACAATGGAAATGATGAGCAAGTGCAAGCCAAGGGCATGCAGCTGCGAAGAAGTACTCGTGGGCGCCCTCGTAAAGCAAAAACACCACCCGAATCTCCTCCACCAAGTTTAAAGCAGGAATTGGATTCTGATGATGACCGTGACAATGATAATGACATTGACTTTGTGGCAGCCGAAGCAGTGCTAGGCACTGATGACAGTGAAAGTTCCAGTGAGAGTAGCGATAGCGACTCTGGTGACAGTTTGCCTGACATTGAGCCAGCGGAGCGCTATGCGGAGATTCCTAAACGAGTTGTAGTGAAACCCAAAAAATATCGTAAACGTCCTAAGCCTTTGGTGCCGCCAGTGCGAATGAGTCGAGAGGAACTTGAAAAACGGAAAGAACAACAAAATAAATTCGATGAGATTATATTCGATTTTTTTAAGAAACTGCCATGCCATATATGCAACCTTTTGGTGCCGAACTTTGGTGATATGCGACGTCATCAACGCATGTCCCATAATTTGGAAAGTGGGTTTATATCATGCTGCGGCCGAAAGTTTCATATGCGCAGGGGACTAGCTGAGCATGTGCTGGTTCATAAAAATCCTGAGCACTTTATGTGCACCCAATGCAGTCGTTTATTTCAAGACTCATATTCACTAGAGAAGCATCAGCAATCGCACACTACTACTACGCCTGAAACAAAAGAAAAGCGCTCTTACCAGTGTGACAAGTGTCCCAAGACTTTTACAACAAAAGCTGCTGTCGAATATCACAATGCATCCAAGCATGTACCCAAGTCGGACTTCAAGTACACCTGCCCTGAGTGCAATAAGAAAGTGCCCACGGAACGCAAGTTAAAGGAGCATCTGCGCTACATGCACGATCCAGAGACCGCTATTATCTGCGATAAGTGCGGTAAGACGTTGCGATCTCGGGCGAATCTCAAGAAGCACCACGAACTGGAACATTCCGACAAGCCACGCCCCAAACCAGATCCAGTGCAATGCGAGATATGCGGTACATGGCTACGTCATTTGTCTGGGCTAAAGCAACACATGAGCACGGTACACGAACCACCTGGAGGAGAGCACCGATGTCACATCTGCGACAAGAAATCCACCAATTCTCGAGCACTTAAACGGCACATTTACCACAATCATCAGTGCGAAAGAAAGTTCCGTTGTACCATGTGTGAGAAAGCGTTCAAGAGGCCGCAAGATTTAAGAGAACACACATCAACACACACTGGCGAAGTATTGTACACTTGTCCGAATTGTCCACAAACATTCTTTTCTAACGCCAATATGTACAAACATCGCCAGCGCTTGCATCGAGCTGAGTGGGAGGCGGATCGCAAGAAACCAGTGCCGCCCAACATAATGAAACAAGCTGTTGGCGCCACTTCAGCATTGAAGAAACGTCAGACCAACAACCCCAGTACAGTGCTATATACACAATCCAACGAGCCTGATGCGGATGCACACAAACAGTAG
- Protein Sequence
- MAVCVLCFERCKIGLSHKIFSEAGLQLNICKTINKHFWLELSSASGNNEEICTQCWESVNSFNVFYQRVYHAHQERREVKNVPIVYCGETETANPLAFAAELDALAEDFIPTDNVKVEVNELEPLPKLEMLEEPVLEGTKATKRPSADTSAISKRRIKHEQQTIGSDSDGDRPLAEFLEIKHNGNDEQVQAKGMQLRRSTRGRPRKAKTPPESPPPSLKQELDSDDDRDNDNDIDFVAAEAVLGTDDSESSSESSDSDSGDSLPDIEPAERYAEIPKRVVVKPKKYRKRPKPLVPPVRMSREELEKRKEQQNKFDEIIFDFFKKLPCHICNLLVPNFGDMRRHQRMSHNLESGFISCCGRKFHMRRGLAEHVLVHKNPEHFMCTQCSRLFQDSYSLEKHQQSHTTTTPETKEKRSYQCDKCPKTFTTKAAVEYHNASKHVPKSDFKYTCPECNKKVPTERKLKEHLRYMHDPETAIICDKCGKTLRSRANLKKHHELEHSDKPRPKPDPVQCEICGTWLRHLSGLKQHMSTVHEPPGGEHRCHICDKKSTNSRALKRHIYHNHQCERKFRCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPQTFFSNANMYKHRQRLHRAEWEADRKKPVPPNIMKQAVGATSALKKRQTNNPSTVLYTQSNEPDADAHKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -