Basic Information

Gene Symbol
Xbp1
Assembly
GCA_018150935.1
Location
JAECWR010000199.1:25593662-25595319[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-14 4e-11 42.8 12.6 2 56 82 136 82 139 0.94
2 2 3.2e-05 0.033 14.2 6.3 25 64 119 158 118 165 0.93

Sequence Information

Coding Sequence
ATGGCACCTGCAAACGGAGTTCTTTTATCCAAGTGTGTGCCCATTGGATCTAATTTAAATTTAAATATATTGCCCAAGTTGCGCCCGGCTCCCGTAACAGCAGTGTTATTAAAGGGTGGGTCGTCTCCATCCAGTTCGGGTTACGCGTCATCATCCAACAGTGTTGTGGATGAGGACATAATGGCTTCAAATCAGTCTACACCCGTAAAGGCTAAGAAACGCCGTCTGGATCATTTATCATGGGAGGAGAAGGTGCAGAGAAAGAAACTAAAGAATCGTGTTGCGGCACAAACCAGTCGCGACCGGAAGAAGGCACGTATGGAGGAAATGGAATATGAAATTAAGGAACTAAATGAGAAAACGGAAATACTTCAAAATAAATGCGAGAGCTTGCAGAGCATTAACGAATCTCTGCTGTCCAAAAACCACAAGCTCGATACGGAAGTTGAACTCTTGCGTCAGGAGCTCGCTGAAATGAAAGAGATTGCGAAGAACTTCAGTCACAGTAACAGTGCCGGCGTTAATGCAGGCGCTGAGGGCTGTGCGTCCACACTCACTGGATCTGCAGCATCCAATGCTGACCCTCAGCAGCAGGGACCTGAAGAAGAGCAACTCAACGTCCTCGCTCTGGAGAATTGTAGCGCTCTGTCTTCTATACAAGACATGCTACTCGTCGACGACGAAGAGTTCGATGCGCGACGACTTGAAGAGCTGGCAGAGAGCCTGCTCGCAGATATCACAGCAGAGCTGGAAACAGGCAGTGGTACGTGCGAGCAAGCTCCTCCCAAAGATGCAGGCGAGCCAGAGCGACTGCCTGGATCAATGGTGGGGACCTCAGCAGAACGCATGGAATCCGGCGGAAATAGAGCTGATGGCATAGACAATAATGCTGAAGCCAAACCAATTCTAATGCACACACCAATTGAAACCAACAGCAACAATGACAACAGCCCCAGCCCTAGTGAGCAGGTGCCACAAATAAATGGAAACCTACAAAAGAAGACAACAGCCCCGATGACAACGCCAGCGACGGCAACAACTACTATTTCAGCAGCTACATTTTTGCAGAGCGCAACACCCGACACAGTGTACGGCACATATGATGCCAAGACGAACTCTATTACGATCGTCATGGATGGCGATGCCGTGCCAGTCAACGAGGCAGTTGAGGTGATCTATGGTGAGGGTGTGAGCGCTGGAGACGACACGACCGATGTGATCATGAAATGTCCAACTCCAGCGACCTCACCCTCTCAGGTCTACCTCAACGTGATCAACGCCACCGAAGACTCAGATGATGAGAACATAAGTCATCTGAATTTCGAGCCTATGGAGAGATTCCTCTGCCCGCGTGTCAAGGCCATCTCACCACTTGCCAAATCACCAGCGCAATCAATTCATTCGGCCACCTCAGATCATGGCTATGAGTCTGTACTTGGCTCGCCAAGATCATCGGCGCTAGCGACCTTAGACACAGATGAAGATTTCCCCTGGGAGAGTAATTTCGATGAGCTATTTCCTAGTTTGATTTAA
Protein Sequence
MAPANGVLLSKCVPIGSNLNLNILPKLRPAPVTAVLLKGGSSPSSSGYASSSNSVVDEDIMASNQSTPVKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELNEKTEILQNKCESLQSINESLLSKNHKLDTEVELLRQELAEMKEIAKNFSHSNSAGVNAGAEGCASTLTGSAASNADPQQQGPEEEQLNVLALENCSALSSIQDMLLVDDEEFDARRLEELAESLLADITAELETGSGTCEQAPPKDAGEPERLPGSMVGTSAERMESGGNRADGIDNNAEAKPILMHTPIETNSNNDNSPSPSEQVPQINGNLQKKTTAPMTTPATATTTISAATFLQSATPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEVIYGEGVSAGDDTTDVIMKCPTPATSPSQVYLNVINATEDSDDENISHLNFEPMERFLCPRVKAISPLAKSPAQSIHSATSDHGYESVLGSPRSSALATLDTDEDFPWESNFDELFPSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00562216;
90% Identity
-
80% Identity
-