Basic Information

Insect: Drosophila prostipennis
Gene Symbol: salm
Assembly: GCA_037075205.1
Location: JBAMCJ010002873.1:1977947-1985872[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-06 0.00018 22.0 1.7 1 23 326 348 326 348 0.98

2 8 3.7e-06 0.00029 21.4 1.1 1 23 354 376 354 376 0.98

3 8 2.3 1.8e+02 3.1 2.5 5 23 601 619 598 619 0.84

4 8 3.4e-08 2.7e-06 27.8 0.2 1 23 625 647 625 647 0.98

5 8 0.001 0.081 13.7 0.9 1 23 657 679 657 679 0.98

6 8 0.052 4.1 8.3 0.1 2 23 894 916 894 916 0.96

7 8 1.1e-05 0.00088 19.8 5.0 1 23 1057 1079 1057 1079 0.96

8 8 8.9e-08 7e-06 26.5 0.7 1 23 1085 1107 1085 1107 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-06	0.00018	22.0	1.7	1	23	326	348	326	348	0.98
2	8	3.7e-06	0.00029	21.4	1.1	1	23	354	376	354	376	0.98
3	8	2.3	1.8e+02	3.1	2.5	5	23	601	619	598	619	0.84
4	8	3.4e-08	2.7e-06	27.8	0.2	1	23	625	647	625	647	0.98
5	8	0.001	0.081	13.7	0.9	1	23	657	679	657	679	0.98
6	8	0.052	4.1	8.3	0.1	2	23	894	916	894	916	0.96
7	8	1.1e-05	0.00088	19.8	5.0	1	23	1057	1079	1057	1079	0.96
8	8	8.9e-08	7e-06	26.5	0.7	1	23	1085	1107	1085	1107	0.98

Sequence Information

Coding Sequence: ATGTGTTCAATATTTCGCAACCGCATCAATTACCGTGGAACCGGCGGCACCAGGAGCGGCAGCGGAGAGCGGGAGAGGGACCGCGACAGGGATCGGGACAGAGATCGAGATCGGGAAATAGGTAGTAGGGACGCCCTGCTGGCCAAGGAACTGGATGCGgatagcaacaacaatggcaccGAGCCGCAAATGGAGGCGGAGGCACTTCCGGAATCCGACACGGATCGGGAAATGGAATTGGCCGAGGAGCACGGCgaggatcaggatcaggacCAGGAGAACAGCAACGAGGCCCTCGACCTCTCGCTGATCTCGTCCAGCGGCCGGGAATCGCTGCCTGGCAGTGGTCACGTCTCGCTGGAGGCCCTACAACATACCAAAGTGGCGGTGGCCCAGTTCGCGGCCTCGGCGATGGCGGGCAACCATCAGAGCGCCGATCTGGCCATGGTCCAGTCCACCATCTTCAATGTGCAGCGGCAGCATCTGATGCAGCTGCAGCTCATCCAGCACCTGCAGAGTCAATTGAAAAGGGCCGAGGCAGCCGCCCTGGGCAGGCAATCTCACagcgatgaggaggaggacgaaACGGAGCCGGAGCCCAAGAAGCAGCCAACCAATGGCCtcaaggaggaggaagaggaggaacAGGAGGAGCAAGAGCAGGATCACGAGAAGGAGCCGCGGCGGGAGGAGAGTTCAAAGACTGACAAGAGGGCGACTGAGGAGAGGAAGACGGAGCCGGAGGGCTACCAACCCAACATGATGTGCGACATCAGCTCGAGCCTGGCCTCGAGCATCATCACCAACCACGATCCCCCGCCGGCCCCCAACGAGCCCAACTGCCTGGAGATGCTGCAGCGGCGGACGGAGGAGGTCCTGGACTCCGCCTCCCAGAGCCTGCACGCCGCCCAGATGCAGGAGGAGTACTCGGAGTACGCCTCCAAGGAGGCTCAGAGTCGCGGAGAGATCTTCAAGCACCGCTGCAAGTACTGCGGCAAGATCTTTGGCAGCTACTCGGCCCTGCAGATCCACCTGAGATCCCACACCGGCGAACGGCCGTTCGTTTGCAATGTCTGCGGCAGTAAGTTCACCACGAAGGGCAATCTGAAGGTTCACTACCAGCGGCACACGCAGATCTTTCCGCCCATGCTGCTGCCACCAGGtgtggcgcccaacgtggggcattCCGGTCAGGGTCAAGGGGCGCAGGCCGAGCAGTATCCCATTCGGCTGCCTTTCGTGCCTCCAGCGGCACCAGGGAGCCAAGAGCAGGTTCCGCAGCTGCCAGTGGAGGAGCCGGAGGAAGTCAGCGGCAGGCAGGAGGTTCCGATCCCGATTCCCGTTCAGCAGGCCGAAGATCTCAGCAAGCCGGTGGCGCGGGAGAAGGAGAAGTCCCACTCACCCGTGGAGCGGGTCAAGACCCCCAAGGAGGTGAAGCCAGAGGTTCAGCAAGCGTCACCAGCGGAGAAGCCCGAAAAGGAGGTCTCCAAGCCACCGGCGGTGACCACTTCGCGACGAAATGGCTCTGTCCGCAAGCGACAGACCAGCAGTGCTGGGAGTCCTCCTCAAGAGGACAGGGAACGGGATCTCGCCGAGCATTTGCATATAGCCAAGCTGGTGAGACGCTCATCCGCGAGCAGAGAGTCACAGCCGGCCGAGTACTCGCTGGCCCAAATGGAGCGCATCATCGACAAGTCGTGGGAGGATCTGATCGAGATCGACAAGACGTCGGAGACCTcgaagctgcagcagctggtGGACAACATCGAGAACAAGCTGACCGATCCGAACCAGTGCATCTTCTGCCAGAAGGTCATGTCCTGCCGCAGCTCCCTGCAGATGCACATCCGGACGCACACCGGCGAGCGTCCCTTTCGCTGCAAGATCTGCGGCAGGGCCTTCGCCACGAAGGGCAACCTGAAGGCCCACATGAGCATACACAAGATCAAGCCGCCGATGAGGAGCCAGTTCAAGTGTCCCGTGTGCCACCAGAAGTTCTCCAACGGCATCATCCTGCAGCAGCACATTCGCATCCACACCATGGACGATGGCAGCGGTGGCCAGGCTGGTGGTCCCGGCACGAATCCCGGCGAGGCCGAGCGGTTGGGCATCGAGGATCAGAACTCCAACAAGTCGCTGGGCACCTCGGACACCCTGGACTTCTCCACCACCATTTCGGATCACTCGGGTCAGCGGTCGGAGTCGTCGCAGGGCGGCGATTTCGATGAGTTCATGACCATGGACAGCACCGATGACTCCAGGGACAACTCCAGTGCGGCCACAGCCACGCCCCATCCGCTGGAGAgcagggagagggagagggaaagGGAGAAGGAGCGGGAAAGGGAACGGGAGCGTAGGATCCCAAACGACGGCTCCGACGAGAGATCTCATTCCAATCCCGATCTGGCCGGAGGACGCAGCGAGAGTGGGGAGATGCCCGCCATGGATCTCTCCTCGCCCTCCTCCGCCACCGGCCGCATCTTCGGAACCGGACTGGCGAATGGAGGATCGGGCAGTGGTGGTCTTCCCGGGATGCTCGGGATGCCCATGCCGCCGAATCTCCTGCTTATGGCAGCTGCCCGCGAAGAAATGCACGCTCTAGGTCACGCTCACGCCAAATTTCCCCTGCTGCCCTTTGGTCCACTTGGATTTATGGGTCTGCACCCGCCCCCCAATGTGTGCAATCTCTGCTTCAAGATGCTGCCCAGCCTGGCCGCCCTGGAGAGCCATCTGCAGAGCGAACATGCCAAAGAACCGGCGACGGGCCACGCCCTCCGCCCCCACAGCAGTGACGCTGGATCGCCGTACGGTGCCAAGCTCACTCTCAATCCAAATCTGTTTGCAAAGAAGCCGCCTTCGTCGTCATCGGGTGACAAGTTGCCGGAGGCATCCGCCCTGCCCTTCGCCCCCGAAAATGCCCCAGCGGCGCCCATTAAAGAGGATCCCGATCAGGAGCAGTTGATGGAGGAGGGAGCCTCGGCTGGCGAAGGATCTGTCAGTGGAGCTGGCTCGAACTATCCCCAGGATGCCGGCGATGCGGAGCAGTCGCTGATGAAGATGCAGCTCCATGCCCATCGTTTTCCTGCCAGTCCCCTCGACTTTCAGCAGGCTCTGATGTCCGCAGGACCTCCGACCTCCAGTCTGGATCCTCCGGTGAACAACAAGCACTTTTGCCACGTCTGCCGCCGGAACTTCAGCTCGAGTTCCGCTCTCCAGATCCACATGCGCACCCACACAGGCGACAAGCCCTTCCAGTGCAATGTGTGCCAGAAGGCCTTCACCACCAAGGGGAATCTCAAGGTGCACATGGGCACTCACATGTGGACGAATCCGACTTCGCGGCGAGGTCGTCGAATGTCCTTGGAGCTCCCCATGCGTCCTGGTCCGAACTCGGGTCAAGGTCACCCAGGACCGACTGCCGAACAGGAGTTTATGCAGCGAAGACCGGAGCTCTTTTTTCCCTACCTGCCGCCTTTTTTTAACGGACTGCCACCAAAGCCTGGTGAACTGAGTCCAAGCGCCTTTCCCAATATTCCCCCGCCGCCCTTCGCCAACGGCGGCAAGTATCCCTATCCGCCCGGACTCCTTGGATTCCCGGGCTTCCTGGCCCAGCATCCTTATGGCCTAGAGCGGCGGAGCAACAGCAAGTCCCCCACACCAGAGCCGGCTCAGAGTCCCTCGCTGCGGGAGGACGAGGGTTCCGGCAACATATGGCATCCACTGAGTCGCATCAAGGTGGAGAACAATCAAAACGAAGCCGGGGGCGGCTTCAGCGAGCAGGAGGATCAGCAGGAGGCAGAGGCCGAGGGCACCGGAGGTGGGGACAACGAGGAGTCGGAGTCCAGAGATGCGGAGAAGTAA
Protein Sequence: MCSIFRNRINYRGTGGTRSGSGERERDRDRDRDRDRDREIGSRDALLAKELDADSNNNGTEPQMEAEALPESDTDREMELAEEHGEDQDQDQENSNEALDLSLISSSGRESLPGSGHVSLEALQHTKVAVAQFAASAMAGNHQSADLAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAEAAALGRQSHSDEEEDETEPEPKKQPTNGLKEEEEEEQEEQEQDHEKEPRREESSKTDKRATEERKTEPEGYQPNMMCDISSSLASSIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVAPNVGHSGQGQGAQAEQYPIRLPFVPPAAPGSQEQVPQLPVEEPEEVSGRQEVPIPIPVQQAEDLSKPVAREKEKSHSPVERVKTPKEVKPEVQQASPAEKPEKEVSKPPAVTTSRRNGSVRKRQTSSAGSPPQEDRERDLAEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQAGGPGTNPGEAERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLESREREREREKERERERERRIPNDGSDERSHSNPDLAGGRSESGEMPAMDLSSPSSATGRIFGTGLANGGSGSGGLPGMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHALRPHSSDAGSPYGAKLTLNPNLFAKKPPSSSSGDKLPEASALPFAPENAPAAPIKEDPDQEQLMEEGASAGEGSVSGAGSNYPQDAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRPGPNSGQGHPGPTAEQEFMQRRPELFFPYLPPFFNGLPPKPGELSPSAFPNIPPPPFANGGKYPYPPGLLGFPGFLAQHPYGLERRSNSKSPTPEPAQSPSLREDEGSGNIWHPLSRIKVENNQNEAGGGFSEQEDQQEAEAEGTGGGDNEESESRDAEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527496;
90% Identity: iTF_00605745;
80% Identity: -