Basic Information

Insect: Drosophila prosaltans
Gene Symbol: pita
Assembly: GCA_018151275.1
Location: JAECWY010000037.1:4032397-4034872[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00067 0.058 14.1 0.1 1 23 269 291 269 291 0.96

2 10 5.2e-06 0.00045 20.7 2.9 1 23 297 319 297 319 0.94

3 10 2.1e-06 0.00018 22.0 2.5 1 23 325 347 325 347 0.99

4 10 0.33 29 5.6 0.2 1 23 353 375 353 375 0.92

5 10 8.6e-06 0.00075 20.0 0.4 1 23 381 403 381 403 0.95

6 10 0.00024 0.021 15.5 3.3 1 23 409 431 409 431 0.94

7 10 0.0011 0.098 13.4 5.2 1 23 437 459 437 459 0.98

8 10 5 4.4e+02 1.9 0.4 1 20 467 486 467 489 0.80

9 10 0.15 13 6.7 0.1 2 23 495 516 494 516 0.96

10 10 0.0029 0.25 12.1 0.3 1 23 522 545 522 545 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00067	0.058	14.1	0.1	1	23	269	291	269	291	0.96
2	10	5.2e-06	0.00045	20.7	2.9	1	23	297	319	297	319	0.94
3	10	2.1e-06	0.00018	22.0	2.5	1	23	325	347	325	347	0.99
4	10	0.33	29	5.6	0.2	1	23	353	375	353	375	0.92
5	10	8.6e-06	0.00075	20.0	0.4	1	23	381	403	381	403	0.95
6	10	0.00024	0.021	15.5	3.3	1	23	409	431	409	431	0.94
7	10	0.0011	0.098	13.4	5.2	1	23	437	459	437	459	0.98
8	10	5	4.4e+02	1.9	0.4	1	20	467	486	467	489	0.80
9	10	0.15	13	6.7	0.1	2	23	495	516	494	516	0.96
10	10	0.0029	0.25	12.1	0.3	1	23	522	545	522	545	0.92

Sequence Information

Coding Sequence: ATGCTCTGTTCTCTGCTCTCCTTGTGCCTGGGCCTGCCTTTTGTTCTCTGTGCCTTCCACAGTATGGGGGTAAGCAGCGACGATGGGATGCCTTCCTTGATTTGCTTGGACTGCAGATTACTCTTTGAGCATTGTTACCGGTTTAAACAGATGTGCAAGCGTGCCGAGACGTTGCTAAGACAATATCCATTAACTGGATCATGGCCAGAGCCATTGGAAAAACCACGTGCACCTCTCATAGCCACCCAAATGAAAAAGGATACGGGAACCAAAGATGGACAACCAAAAAAATTATTAAATTCTTTGGTTAAATCAAATCAGTTGGTAATCGAAGATGTGCAGGTCATGGAGACTAGCGCATTGACCATGGCGGCTTCGAAACCTACACCCAACTTGAAGAAAGTGAAATCCACCTATCAAATGAAAGTAGAGAATAATCAGGAGTTGTCTATGGATGATGTCCATAATTTGATAGCTGAACTAGAGGAAGAGGCATTGGTCACTGTACGAGATGATACACCTTTACCACCACCAACATCTTCAGTGCCTGCAACCACTTCTGGTGCTCTACAGTCCACAAAAGAAAAAGTCTCTCCAAGTAAACCAAAAGTTCTAAACAAATCCTCGATGCGAATTTTGAATAAGGTGGCCTCTCAGCCCGTTGAGCCACGCCTCTCAATACCTCAAGTTCAAAGGGATCAGGATGGCAATGTGGCAGCCATAGTAACCGAAATTATTGATCCTCGTGATTTCGACGGAGCTGAAGATCCTACAAAAAATGCTGCCCCTGTGGCAACTAATGTATTTCCCTGTCCAGATTGCGAACGCTCGTTTCCCCTACAGCAGCTATTAGACATTCATCGCCTGAATCATACCCGGAAACGTAGCTTCCAATGCAGCGATTGCGATAAAAGTTTTTTCTCGAAATATGATTTGCAAAAGCATAATTTTATCCACACCGGTGAGAAGCCATTCCAATGTACTGCTTGCGACAAGGCTTTCACTCGTAAGGCTCTGCTCCATCGCCATGAACGCACCCACACGGATATGCCGAAATTTCTATGTTTATACTGTGAGAAGCCATTCCTCTCCGAGGAGGAGATGTTGAAGCATGCGGAAAGGCATACAAAACAAAGGAATTTTCAGTGCAATATTTGCAACAAGTCTTTTGCCTTTAAGCAGGGATTGGAGCGGCATGAGGTCATTCACAGCAACAATTTGCCTTTCTCATGTCAGCATTGCAATCGCAGTTTTGTCACTGCCTGCAAATTGGCTCGTCATCTGGTGGCCCATGCTGGGAAGCGCGTCTATCCCTGCAAATACTGCAATAAATCATATTTGCTCTCTCATCATCTGTCCCGACATTTGCGGGTCCATAAGCAGGTATCCGGCACCTCATTTGTGTGCAGCATTTGTCGCGAAACCCATCAGACCTATGAAAGTCTTGTTGATCATTCCGCTGGTCATGCCAATGAGGATTTAGTGTGCCCTCTGTGCAAGGAGAATATCGTTAGTACTGATATGATTTCGAATCATATGCAAAGGCATAAGGACAATGAGAGATTTGCTTGTGAATTTTGCGATTATATTTTCCTTAATCAAAACCAGTTGCAAAAGCATATTGAAGATGACCATGTGGTGGACATGGTGCCCTACCAGGAGGCTGATAAGGAAACCAACGTAGAAGTGAAATCTGAAGATGAAACGGATTTGTTGCAAGAGCTCCTTGGCGATGAATATACACCTACAGAACCAACTTCTCCACCAGCAAAAATGATGAAATTGTGTCTGCCCAAGATCAAGAAGCTCTCAACGACTTCCTCCTCATCATCCTTTGAGGAAAAACGCCAGACACGCAGTCAAGATAATGCAAAAAAACAAAAGCCACACGAATTAACAAAGAAACCACCAAGAGGCAGTGAACCAAAGAGGGAAACCAAAAATGAAGTTCCAACCAAGCAAGGCCGCCTAATTCGGAATGGAAAATCAACTGGCCAGGCCAAGAAGCATTCCACTTAA
Protein Sequence: MLCSLLSLCLGLPFVLCAFHSMGVSSDDGMPSLICLDCRLLFEHCYRFKQMCKRAETLLRQYPLTGSWPEPLEKPRAPLIATQMKKDTGTKDGQPKKLLNSLVKSNQLVIEDVQVMETSALTMAASKPTPNLKKVKSTYQMKVENNQELSMDDVHNLIAELEEEALVTVRDDTPLPPPTSSVPATTSGALQSTKEKVSPSKPKVLNKSSMRILNKVASQPVEPRLSIPQVQRDQDGNVAAIVTEIIDPRDFDGAEDPTKNAAPVATNVFPCPDCERSFPLQQLLDIHRLNHTRKRSFQCSDCDKSFFSKYDLQKHNFIHTGEKPFQCTACDKAFTRKALLHRHERTHTDMPKFLCLYCEKPFLSEEEMLKHAERHTKQRNFQCNICNKSFAFKQGLERHEVIHSNNLPFSCQHCNRSFVTACKLARHLVAHAGKRVYPCKYCNKSYLLSHHLSRHLRVHKQVSGTSFVCSICRETHQTYESLVDHSAGHANEDLVCPLCKENIVSTDMISNHMQRHKDNERFACEFCDYIFLNQNQLQKHIEDDHVVDMVPYQEADKETNVEVKSEDETDLLQELLGDEYTPTEPTSPPAKMMKLCLPKIKKLSTTSSSSSFEEKRQTRSQDNAKKQKPHELTKKPPRGSEPKRETKNEVPTKQGRLIRNGKSTGQAKKHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00591178;
90% Identity: iTF_00556047;
80% Identity: -