Basic Information

Insect: Drosophila prosaltans
Gene Symbol: kipf
Assembly: GCA_018151275.1
Location: JAECWY010000758.1:6808559-6811991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.8e-05 0.0016 19.0 2.3 1 23 166 189 166 189 0.97

2 18 2.5e-06 0.00022 21.7 2.1 1 23 195 217 195 217 0.99

3 18 6e-06 0.00053 20.5 1.4 1 23 223 245 223 245 0.99

4 18 4 3.4e+02 2.2 2.8 1 23 258 281 258 281 0.93

5 18 1.1e-05 0.00098 19.7 3.8 1 23 344 366 344 366 0.98

6 18 0.0016 0.14 12.9 0.3 1 23 371 396 371 396 0.95

7 18 2.3e-07 2e-05 25.0 1.1 1 23 402 424 402 424 0.99

8 18 7.5e-06 0.00065 20.2 4.1 1 23 430 453 430 453 0.96

9 18 4.5e-06 0.00039 20.9 1.6 2 23 514 535 513 535 0.95

10 18 7.7e-06 0.00067 20.2 5.8 1 21 538 558 538 561 0.95

11 18 0.0025 0.21 12.3 1.5 1 23 594 617 594 617 0.97

12 18 1.5e-07 1.3e-05 25.5 3.5 1 23 666 688 666 688 0.98

13 18 0.00036 0.031 14.9 1.3 2 23 693 714 692 714 0.96

14 18 2.4e-06 0.00021 21.7 2.5 1 23 719 741 719 741 0.99

15 18 0.0022 0.19 12.5 4.4 1 23 771 794 771 794 0.95

16 18 0.00014 0.012 16.2 2.3 2 21 887 906 887 908 0.94

17 18 0.00036 0.031 14.9 3.7 1 23 914 936 914 936 0.98

18 18 0.0088 0.77 10.5 2.4 1 23 941 964 941 964 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.8e-05	0.0016	19.0	2.3	1	23	166	189	166	189	0.97
2	18	2.5e-06	0.00022	21.7	2.1	1	23	195	217	195	217	0.99
3	18	6e-06	0.00053	20.5	1.4	1	23	223	245	223	245	0.99
4	18	4	3.4e+02	2.2	2.8	1	23	258	281	258	281	0.93
5	18	1.1e-05	0.00098	19.7	3.8	1	23	344	366	344	366	0.98
6	18	0.0016	0.14	12.9	0.3	1	23	371	396	371	396	0.95
7	18	2.3e-07	2e-05	25.0	1.1	1	23	402	424	402	424	0.99
8	18	7.5e-06	0.00065	20.2	4.1	1	23	430	453	430	453	0.96
9	18	4.5e-06	0.00039	20.9	1.6	2	23	514	535	513	535	0.95
10	18	7.7e-06	0.00067	20.2	5.8	1	21	538	558	538	561	0.95
11	18	0.0025	0.21	12.3	1.5	1	23	594	617	594	617	0.97
12	18	1.5e-07	1.3e-05	25.5	3.5	1	23	666	688	666	688	0.98
13	18	0.00036	0.031	14.9	1.3	2	23	693	714	692	714	0.96
14	18	2.4e-06	0.00021	21.7	2.5	1	23	719	741	719	741	0.99
15	18	0.0022	0.19	12.5	4.4	1	23	771	794	771	794	0.95
16	18	0.00014	0.012	16.2	2.3	2	21	887	906	887	908	0.94
17	18	0.00036	0.031	14.9	3.7	1	23	914	936	914	936	0.98
18	18	0.0088	0.77	10.5	2.4	1	23	941	964	941	964	0.95

Sequence Information

Coding Sequence: ATGGAAAATGTGTGTCGCGTGTGTAGGGATGGCTCGGTCACCTTAGTAGAAATATTCAGCGGAGTGCAGAACGGCGACTACGACAACGAGGAGCAAGAAAAGAATTTAGCTTATGTTCTGAGCCAGTGTGCCAACTGTCAGGTTACGCGGGACGACTTACTACCAAAACAAATATGCCTGTCCTGTGTTCTAGCAGCTCAAAATGCATTCCGATTCAAAAAAACATGTGAAGAAAGCTATTTACACTTTTGTCAACTCCTGGAGATGGGTGGCCAAAAACAACATAGTGTCCCACAGGTAGAGCGGAGATTCAACGATAATGATGTGCTCATGGAGGGTGGTCTACATGTCATCGATGTGAGCTGCATCAAAACAGAGCCTTGTGTCGAGCTACAGGAGAATGTTATGCCAACTGACAACGATACGACGGAGGATGCATTTAGAACGATTGCTCCCGGTGAAGATCAGGGCAACTTAACTAGCGAGGTGTTCCCGCATGTGTGCCAGTACTGTACTAAAGGCTTTCGAGGATCCTACGAGCTCAACAATCACATTCGTTCTCGTCATACAGGAGAACGGCCATTTAAATGCCCCCATTGCCCAAAGGATTTCTCTGTACGAATGTATTTAAGAAATCATCTTCGTGTCCATACGGGGGAGCGTCCTTACAAATGTCCACATTGTCCTAACGCTTTCACCCTGTCCAACACCCTTAAAGCTCACATTCGAAAACATGGTGATGGGCGAAACCGATTCTTTTCCCGCAAACTGTTCAGATGCGACTGCTGTGCGGCGTCTTTCCGGAAGGCATTTGGCCTACGTATGCACAAGCAATTGAAACATCGCATTAGTGATACAATTGAAAAAGCTAAAGAAAAGGGCCCACAGTCGTCAATTCAACGTTCCAAGGCAAACGCCAACATACAAGAAAGTCTTCTGGAAATTAAAAAAGAACCTGTAGAAAAGGTGGATACTTCACCTGAGCCTGTCCCCGTCGAACCAAATGAACATGTTGGCTTTCCTAATAAATATTCCTGTTCGATTTGCGACTTGAAGTTTCGTTACAGATACCAATTTACCAATCATATGCGCTACCATGCAAAGCGACCCTTTGCGTGTCCTGATCCAAAATGTTCACAGGCCTTTCAAACAGAAATCAATCTCAGACAGCATCAAATGCGTTTTCATGCCTCCGATTGGCCATTTCAATGCGATGAGTGTCCTAAGGGTTTCTATAATAATTACAGTCTAAAACTACACATGCGATCACACAGTGGAGAACGTCCATTTGAGTGTCCACATTGTCAACAAAGATTTACCCAAAAGCAGAACTTGAATCGTCATGTAACTAGAAGACATTCTCAGGCCGGTGCTATAGAAACAACTTCAACAGATGAACATATTAGTGAAAACTGCAAGACGTCAAGTGTAGATCCCCGCATATTGATTAAATCAGAATTTCCAGAGCAGATTCGACCCCATGAATTTCAAGAAGAACAAATTCTACCAGATGGCGATGACGTTATTAAGAACCCAGATATGTGCCACATTTGCGGAAAATATTTCTCAGACAAATTCACTCTGAATCGGCATATTAGTGGTCATACCGGCTTTCAGTGTCCTCACTGTCCAAAGTCTTACACCCAAAATAATAATTTAAGGGCTCACATCCGCTGTCACCATGAACAATCGACTGACCAAAACGGGCCAGCGAAATCTGGAAAGAAAAAATCAAAACAGGGAAAATTTGTAAAATCCATGACAACTAAAAGAATAAGTTATCGTTGCAAGTGGTGTCCAATTGCTTTCCGAGAACAACATAAAATGGTGCTTCATATGCAGCAAAAACACAAAAAACGTCTAAAGGAGAGCTCCATCGAAGAGGAACAACTAAAAGCGAATAGCCAAAAGGAACCAATTGAAACTGAAATGAATAACATAGTCGCGGTGCAATCCGAAAAGGAGGTCCTAGTACCGAAAGGTTCAACAAAAACTCATAAGTGTAGTGTATGTGGCAAGGTTTTCACGAGGAGATATAGTTTTATCCAGCACATCCGTACACATAAACCACCCTTAAGTTGTTCTGTGTGTTCAAAACAGTTTAAGTTTTATGCCCAGTTAAGAGTTCATACGCGTCTGCACACAGGCGGAAGGTTTCAATGTGCTCACTGTCCCAACTCCTATTCTCGCAAAGATAATTTAGTTAAGCATATGCAAAGACATAAAAATGTGGAGGTAGTTGAAGAAAGTGCAGATTTTAACAGCCCGTCTCCTGTTGAAGATGATTCAGTTGGACAAACGGAGCCCCTTCATTACTGTCAACTGTGTTCCAAATCGTTTCGCTATGTTTATAATTTAAGGCTGCATAAGCTCATGAAACACGGCATCAACGAGGAAACAAATGATGTGGAAGATCAAAAGTTGAATTTAAGCGGGCTGGAAGATGAAGAAGCAAATTTGAAATTACGAAATAGACCTGGAGCTGGTGCGTACGAAGAGCTTGAATTCGAGGACAGTGATGTTGAAAGGCGTAACATCAATAAAAAAAAGGCCATATCAAATCCGAAACCCATAATTGTTGAACTAATACCATTACCACAAGCTCCAACAACCGAAGATCATTTGACCAACACAGAGGAAAGCCTGGCAAAAAAAAATGTATGTCCGTATTGCTTTAAGCGTTACGTACGGAAAGAGAGCTTAACCGTTCATATGAGATGTCATACTGGCGAACGACCATACAAATGTTCATATTGCGATTTAAGCTTCAGTTCGAATAACGCTTGCAAAAGACATCTTCGAGGGCATACTGGAGATCTATTTCGTTGCGATAAATGCCCAAAAGTATATAAGGCTCGATCTGAGTTGCGATTTCATAAAAATAGGAAACATAGCGCCTCCATAGAGGAGCCAATTGTATTAACAAAACGTTTGATTGTACGTTTAGAACGCATTAAACTACCACCTAATATTAAGATGGAACCGTTAGATACTTTAGCTTAA
Protein Sequence: MENVCRVCRDGSVTLVEIFSGVQNGDYDNEEQEKNLAYVLSQCANCQVTRDDLLPKQICLSCVLAAQNAFRFKKTCEESYLHFCQLLEMGGQKQHSVPQVERRFNDNDVLMEGGLHVIDVSCIKTEPCVELQENVMPTDNDTTEDAFRTIAPGEDQGNLTSEVFPHVCQYCTKGFRGSYELNNHIRSRHTGERPFKCPHCPKDFSVRMYLRNHLRVHTGERPYKCPHCPNAFTLSNTLKAHIRKHGDGRNRFFSRKLFRCDCCAASFRKAFGLRMHKQLKHRISDTIEKAKEKGPQSSIQRSKANANIQESLLEIKKEPVEKVDTSPEPVPVEPNEHVGFPNKYSCSICDLKFRYRYQFTNHMRYHAKRPFACPDPKCSQAFQTEINLRQHQMRFHASDWPFQCDECPKGFYNNYSLKLHMRSHSGERPFECPHCQQRFTQKQNLNRHVTRRHSQAGAIETTSTDEHISENCKTSSVDPRILIKSEFPEQIRPHEFQEEQILPDGDDVIKNPDMCHICGKYFSDKFTLNRHISGHTGFQCPHCPKSYTQNNNLRAHIRCHHEQSTDQNGPAKSGKKKSKQGKFVKSMTTKRISYRCKWCPIAFREQHKMVLHMQQKHKKRLKESSIEEEQLKANSQKEPIETEMNNIVAVQSEKEVLVPKGSTKTHKCSVCGKVFTRRYSFIQHIRTHKPPLSCSVCSKQFKFYAQLRVHTRLHTGGRFQCAHCPNSYSRKDNLVKHMQRHKNVEVVEESADFNSPSPVEDDSVGQTEPLHYCQLCSKSFRYVYNLRLHKLMKHGINEETNDVEDQKLNLSGLEDEEANLKLRNRPGAGAYEELEFEDSDVERRNINKKKAISNPKPIIVELIPLPQAPTTEDHLTNTEESLAKKNVCPYCFKRYVRKESLTVHMRCHTGERPYKCSYCDLSFSSNNACKRHLRGHTGDLFRCDKCPKVYKARSELRFHKNRKHSASIEEPIVLTKRLIVRLERIKLPPNIKMEPLDTLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00591111;
90% Identity: iTF_00591111;
80% Identity: -