Dpro013908.1
Basic Information
- Insect
- Drosophila prosaltans
- Gene Symbol
- -
- Assembly
- GCA_018151275.1
- Location
- JAECWY010000500.1:284003-285646[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.4e-05 0.014 15.6 0.5 13 40 246 274 241 277 0.83 2 5 0.022 21 5.4 0.1 17 40 278 298 273 301 0.81 3 5 0.13 1.3e+02 2.9 2.1 13 34 302 321 291 329 0.74 4 5 0.012 12 6.2 1.6 17 39 334 353 323 360 0.80 5 5 0.014 14 6.0 1.6 17 39 362 381 349 394 0.71
Sequence Information
- Coding Sequence
- ATGCCCGAATATTTGCTATGCAGAATCTGCCTTACAGAAGACATCAACTCAGATACAATGGCACCCCTTTACGATGACCAGGATGATCTCCAGTGCAGTGAGCTTCGCCGTAAAATTGAGGAAGTGGGCAGCATTAAGCTGTCGCCCCTGGATATACCAAGTATGCTGTGCTACAGCTGCGTGGACAGTTTAACCCATGCCTATAAATTCCGTGAATTGTGCCAGGCTAGCGAGCGGACTTTTGCCAGCAACATTGTTAAGGCTGAAATGAAATTGGAGCCCACAGATGAATCTACCATCACACATCAACAAATAGAATACATATATGAGACGACTAATGAATTTATTGAAACCGATGGAGACATTGAATTTCTGGAAGAACCTCTGGACGAAATGGAAGGGGTGGAGGGAGGTACGCCAACAGAAGAAGGATCAGAAATTGAGCACACTGTTAGAGATACTTTAGCCGAAAGTGAAGGACTACGTGAGCTTGATGATGAAGATGCCGTTAGAGATAATTTTAACGATGAGGAAGAAACTGAGCTCGTTGAAATGGCGCATGGAAGTGACAGTGATTATGATCCCGACGAAAACTTGCGCAAATCTAGGATAAAAGGTCGCAGACCCAGACGTCTTTCAGCTAAACGTGGACGCGGAAGGCCACGTAGTTTTCACGTCCCAAGTAAAAAGACGTCACCAATAGATAATACTGTTGCTGGGAAAGCTTCTGAAGAACCCTCTACGAATATCATGTGTGAAATATGTGGAAACATCTACTCCAGGCGTGCTGCTCTAAATATTCACATGCGTCGCCATCTTGCCGAAAAACCTTTTGAGTGTGAAATCTGTAGTAAAACTTTTGCCGGTCCTTCCGAACTAAATCGGCACATACGTGTTCACACAGGCGAAAAACCCTTCACTTGCAAATACTGTTCTCGATCCTTTGCTGATCGCAGCTCCAATATACGACACGAAAGGACTCACACAAATGAGCGACCTTTTACCTGCTCCACTTGCGGCAAATCATTTTCCTATTCAAATGTCCTTAAGAATCATATGCTGACCCACACGGGAGAGAAACCTTTTCTGTGTATACCGTGCAATAAAACCTTCTCGCGGAAACATCAACTGGAGCAGCATATTGGCACCATGACACATCAGCAAACAGTCAGATCCCATCAGACCAACGATACCATGCGAGTCCCCACAGAGATTATGTACTAG
- Protein Sequence
- MPEYLLCRICLTEDINSDTMAPLYDDQDDLQCSELRRKIEEVGSIKLSPLDIPSMLCYSCVDSLTHAYKFRELCQASERTFASNIVKAEMKLEPTDESTITHQQIEYIYETTNEFIETDGDIEFLEEPLDEMEGVEGGTPTEEGSEIEHTVRDTLAESEGLRELDDEDAVRDNFNDEEETELVEMAHGSDSDYDPDENLRKSRIKGRRPRRLSAKRGRGRPRSFHVPSKKTSPIDNTVAGKASEEPSTNIMCEICGNIYSRRAALNIHMRRHLAEKPFECEICSKTFAGPSELNRHIRVHTGEKPFTCKYCSRSFADRSSNIRHERTHTNERPFTCSTCGKSFSYSNVLKNHMLTHTGEKPFLCIPCNKTFSRKHQLEQHIGTMTHQQTVRSHQTNDTMRVPTEIMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600516;
- 90% Identity
- iTF_00483905;
- 80% Identity
- iTF_00591232;